Literature DB >> 23634097

The chalcone derivative (E)-1-(4-fluoro-phen-yl)-3-(4-hy-droxy-3-meth-oxy-phen-yl)prop-2-en-1-one monohydrate.

Florastina Payton-Stewart1, Subramanya Ravi Kiran Pingali, James P Donahue.   

Abstract

The title compound, C16H13FO3·H2O, has a cis disposition of the carbonyl and olefin bonds about the enone single bond. The arene rings are inclined to one another by 10.05 (6) Å. In the crystal, mol-ecules are linked via O-H⋯O hydrogen bonds involving the water mol-ecules, forming loops which are, in turn, linked via O-H.·O and C-H⋯F hydrogen bonds, forming sheets lying parallel to (103). These networks are linked via π-π inter-actions [centroid-centroid distance = 3.641 (1) Å] involving inversion-related 4-fluoro-phenyl and 4-hy-droxy-3-meth-oxy-phenyl rings.

Entities:  

Year:  2013        PMID: 23634097      PMCID: PMC3629610          DOI: 10.1107/S160053681300696X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background information on the biological activity of chalcones, see: Anto et al. (1995 ▶); Calliste et al. (2001 ▶); Nowakowska (2007 ▶); Kontogiorgis et al. (2008 ▶); Ducki (2009 ▶); Batovska & Todorova (2010 ▶); Batovska & Parushev (2010 ▶); Gupta et al. (2010 ▶); Varinska et al. (2010 ▶); Katsori & Hadjipavlou-Litina (2011 ▶); Orlikova, et al. (2011 ▶); Yadav et al. (2011 ▶); Kathiravan et al. (2012 ▶); Sahu et al. (2012 ▶). For related chalcone structures, see: Rabinovich (1970 ▶); Ohkura et al. (1973 ▶); Hunter & Sanders (1990 ▶); Arai et al. (1994 ▶); Wu et al. (2006 ▶); Teh et al. (2006 ▶); Yathirajan et al. (2006 ▶, 2007 ▶); Butcher et al. (2007 ▶); Hayashi et al. (2009 ▶).

Experimental

Crystal data

C16H13FO3·H2O M = 290.29 Monoclinic, a = 9.787 (2) Å b = 10.993 (3) Å c = 12.781 (3) Å β = 95.722 (4)° V = 1368.2 (5) Å3 Z = 4 Mo Kα radiation μ = 0.11 mm−1 T = 100 K 0.34 × 0.27 × 0.21 mm

Data collection

Bruker SMART APEX CCD diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 2009 ▶) T min = 0.845, T max = 0.978 11909 measured reflections 3203 independent reflections 2855 reflections with I > 2σ(I) R int = 0.022

Refinement

R[F 2 > 2σ(F 2)] = 0.041 wR(F 2) = 0.110 S = 1.02 3203 reflections 250 parameters All H-atom parameters refined Δρmax = 0.37 e Å−3 Δρmin = −0.22 e Å−3 Data collection: APEX2 (Bruker, 2010 ▶); cell refinement: SAINT (Bruker, 2010 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: XP in SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Click here for additional data file. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S160053681300696X/pk2468sup1.cif Click here for additional data file. Structure factors: contains datablock(s) I. DOI: 10.1107/S160053681300696X/pk2468Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S160053681300696X/pk2468Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C16H13FO3·H2OF(000) = 608
Mr = 290.29Dx = 1.409 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 7532 reflections
a = 9.787 (2) Åθ = 28.3–2.5°
b = 10.993 (3) ŵ = 0.11 mm1
c = 12.781 (3) ÅT = 100 K
β = 95.722 (4)°Needle, pale yellow
V = 1368.2 (5) Å30.34 × 0.27 × 0.21 mm
Z = 4
Bruker SMART APEX CCD diffractometer3203 independent reflections
Radiation source: fine-focus sealed tube2855 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.022
φ and ω scansθmax = 28.3°, θmin = 2.5°
Absorption correction: multi-scan (SADABS; Sheldrick, 2009)h = −13→12
Tmin = 0.845, Tmax = 0.978k = −13→14
11909 measured reflectionsl = −16→16
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.041Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.110All H-atom parameters refined
S = 1.02w = 1/[σ2(Fo2) + (0.0607P)2 + 0.5324P] where P = (Fo2 + 2Fc2)/3
3203 reflections(Δ/σ)max = 0.001
250 parametersΔρmax = 0.37 e Å3
0 restraintsΔρmin = −0.22 e Å3
Experimental. The diffraction data were obtained from 3 sets of 606 frames, each of width 0.3 ° in ω, collected at φ = 0.00, 120.00 and 240.00 °. The scan time was 30 sec/frame.
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.
xyzUiso*/Ueq
F11.90355 (8)−0.41277 (7)0.21518 (6)0.0284 (2)
O11.40402 (9)−0.31928 (8)0.47673 (7)0.0243 (2)
O21.03808 (9)0.36973 (8)0.45389 (7)0.0216 (2)
H20.977 (2)0.3730 (17)0.5032 (16)0.043 (5)*
O31.23977 (10)0.34671 (8)0.33849 (7)0.0237 (2)
O41.14188 (10)−0.39678 (10)0.40629 (8)0.0266 (2)
H4A1.227 (2)−0.378 (2)0.4266 (16)0.052 (6)*
H4B1.141 (2)−0.472 (2)0.3984 (17)0.063 (7)*
C11.45724 (12)−0.24717 (11)0.41849 (9)0.0184 (3)
C21.57311 (12)−0.28995 (11)0.36004 (9)0.0178 (2)
C31.61894 (13)−0.22551 (11)0.27605 (10)0.0210 (3)
H31.5730 (17)−0.1494 (16)0.2507 (13)0.031 (4)*
C41.72921 (14)−0.26744 (12)0.22595 (10)0.0233 (3)
H41.7621 (17)−0.2243 (16)0.1683 (13)0.030 (4)*
C51.79286 (13)−0.37355 (12)0.26222 (10)0.0215 (3)
C61.75010 (13)−0.44096 (11)0.34390 (10)0.0211 (3)
H61.7980 (16)−0.5140 (16)0.3672 (12)0.029 (4)*
C71.63853 (13)−0.39926 (11)0.39241 (10)0.0201 (3)
H71.6074 (16)−0.4430 (14)0.4491 (13)0.024 (4)*
C81.41072 (13)−0.12016 (11)0.40715 (10)0.0195 (3)
H81.4531 (16)−0.0693 (15)0.3609 (13)0.027 (4)*
C91.31350 (12)−0.07855 (11)0.46511 (10)0.0189 (3)
H91.2769 (16)−0.1366 (15)0.5109 (12)0.024 (4)*
C101.25059 (12)0.04162 (11)0.46436 (9)0.0182 (2)
C111.14937 (13)0.06159 (11)0.53213 (10)0.0196 (3)
H111.1290 (16)−0.0018 (16)0.5787 (13)0.028 (4)*
C121.07706 (12)0.17051 (11)0.53043 (10)0.0199 (3)
H121.0059 (16)0.1842 (14)0.5779 (12)0.024 (4)*
C131.10616 (12)0.26192 (11)0.46193 (9)0.0182 (3)
C141.21398 (12)0.24626 (11)0.39687 (9)0.0187 (3)
C151.28376 (12)0.13679 (11)0.39695 (10)0.0189 (3)
H151.3551 (16)0.1271 (15)0.3518 (13)0.026 (4)*
C161.36498 (14)0.34589 (13)0.28868 (11)0.0250 (3)
H16A1.4443 (17)0.3331 (15)0.3422 (13)0.028 (4)*
H16C1.3620 (16)0.2806 (14)0.2335 (12)0.023 (4)*
H16B1.3695 (17)0.4287 (15)0.2550 (13)0.030 (4)*
U11U22U33U12U13U23
F10.0297 (4)0.0264 (4)0.0307 (4)0.0078 (3)0.0101 (3)−0.0034 (3)
O10.0235 (5)0.0194 (4)0.0306 (5)−0.0001 (4)0.0062 (4)0.0052 (4)
O20.0219 (4)0.0178 (4)0.0252 (5)0.0039 (3)0.0035 (4)−0.0002 (3)
O30.0272 (5)0.0195 (5)0.0254 (5)0.0023 (4)0.0075 (4)0.0047 (3)
O40.0229 (5)0.0207 (5)0.0369 (6)0.0017 (4)0.0063 (4)0.0015 (4)
C10.0169 (5)0.0181 (6)0.0195 (6)−0.0012 (4)−0.0010 (4)0.0003 (4)
C20.0186 (6)0.0152 (5)0.0191 (6)−0.0001 (4)−0.0006 (4)−0.0014 (4)
C30.0260 (6)0.0160 (6)0.0209 (6)0.0026 (5)0.0017 (5)−0.0001 (4)
C40.0307 (7)0.0188 (6)0.0213 (6)0.0017 (5)0.0070 (5)0.0005 (5)
C50.0228 (6)0.0202 (6)0.0218 (6)0.0028 (5)0.0031 (5)−0.0064 (5)
C60.0245 (6)0.0155 (6)0.0224 (6)0.0043 (5)−0.0018 (5)−0.0021 (4)
C70.0243 (6)0.0158 (6)0.0199 (6)−0.0001 (5)0.0014 (5)−0.0001 (5)
C80.0194 (6)0.0170 (6)0.0219 (6)−0.0007 (5)0.0013 (5)0.0014 (5)
C90.0189 (6)0.0175 (6)0.0198 (6)−0.0016 (4)−0.0004 (5)0.0011 (4)
C100.0178 (5)0.0180 (6)0.0183 (6)−0.0003 (4)−0.0005 (4)−0.0016 (4)
C110.0201 (6)0.0183 (6)0.0206 (6)−0.0025 (5)0.0021 (5)0.0007 (5)
C120.0176 (6)0.0206 (6)0.0218 (6)−0.0008 (4)0.0031 (5)−0.0022 (5)
C130.0172 (5)0.0167 (6)0.0201 (6)0.0009 (4)−0.0011 (4)−0.0031 (4)
C140.0199 (6)0.0179 (6)0.0179 (6)−0.0013 (4)0.0003 (5)0.0004 (4)
C150.0185 (6)0.0201 (6)0.0183 (6)0.0000 (4)0.0024 (4)−0.0008 (4)
C160.0262 (7)0.0247 (7)0.0247 (6)−0.0011 (5)0.0064 (5)0.0046 (5)
F1—C51.3604 (14)C6—H60.962 (17)
O1—C11.2374 (15)C7—H70.945 (16)
O2—C131.3585 (15)C8—C91.3430 (18)
O2—H20.91 (2)C8—H80.939 (17)
O3—C141.3702 (15)C9—C101.4572 (17)
O3—C161.4361 (16)C9—H90.960 (16)
O4—H4A0.88 (2)C10—C111.3968 (17)
O4—H4B0.83 (3)C10—C151.4135 (17)
C1—C81.4712 (17)C11—C121.3899 (18)
C1—C21.4947 (17)C11—H110.950 (17)
C2—C31.3969 (18)C12—C131.3811 (18)
C2—C71.4043 (17)C12—H120.980 (16)
C3—C41.3874 (18)C13—C141.4175 (17)
C3—H30.989 (17)C14—C151.3837 (17)
C4—C51.3807 (18)C15—H150.955 (16)
C4—H40.959 (17)C16—H16A0.992 (17)
C5—C61.3788 (19)C16—H16C1.005 (16)
C6—C71.3863 (18)C16—H16B1.009 (17)
C13—O2—H2109.5 (12)C8—C9—C10128.85 (12)
C14—O3—C16116.62 (10)C8—C9—H9116.0 (9)
H4A—O4—H4B106 (2)C10—C9—H9115.1 (9)
O1—C1—C8121.50 (11)C11—C10—C15118.81 (11)
O1—C1—C2119.00 (11)C11—C10—C9117.62 (11)
C8—C1—C2119.48 (11)C15—C10—C9123.54 (11)
C3—C2—C7119.24 (11)C12—C11—C10121.14 (12)
C3—C2—C1122.83 (11)C12—C11—H11120.2 (10)
C7—C2—C1117.93 (11)C10—C11—H11118.7 (10)
C4—C3—C2120.69 (12)C13—C12—C11120.00 (11)
C4—C3—H3118.6 (10)C13—C12—H12119.0 (9)
C2—C3—H3120.7 (10)C11—C12—H12121.0 (9)
C5—C4—C3118.12 (12)O2—C13—C12123.52 (11)
C5—C4—H4120.1 (10)O2—C13—C14116.73 (11)
C3—C4—H4121.8 (10)C12—C13—C14119.74 (11)
F1—C5—C6118.65 (11)O3—C14—C15125.71 (11)
F1—C5—C4118.15 (12)O3—C14—C13114.20 (10)
C6—C5—C4123.19 (12)C15—C14—C13120.09 (11)
C5—C6—C7118.23 (12)C14—C15—C10120.06 (11)
C5—C6—H6120.5 (9)C14—C15—H15119.1 (10)
C7—C6—H6121.2 (9)C10—C15—H15120.8 (10)
C6—C7—C2120.49 (12)O3—C16—H16A109.8 (9)
C6—C7—H7120.2 (10)O3—C16—H16C110.4 (9)
C2—C7—H7119.3 (9)H16A—C16—H16C110.4 (13)
C9—C8—C1119.88 (11)O3—C16—H16B105.0 (10)
C9—C8—H8121.7 (10)H16A—C16—H16B110.9 (14)
C1—C8—H8118.4 (10)H16C—C16—H16B110.1 (13)
D—H···AD—HH···AD···AD—H···A
O2—H2···O4i0.91 (2)1.74 (2)2.6479 (14)173.5 (18)
O4—H4A···O10.88 (2)1.90 (2)2.7672 (15)173 (2)
O4—H4B···O2ii0.83 (3)2.17 (3)2.8485 (15)139 (2)
O4—H4B···O3ii0.83 (3)2.38 (3)3.1283 (15)151 (2)
C8—H8···F1iii0.94 (2)2.48 (2)3.3931 (17)164 (1)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
O2—H2⋯O4i 0.91 (2)1.74 (2)2.6479 (14)173.5 (18)
O4—H4A⋯O10.88 (2)1.90 (2)2.7672 (15)173 (2)
O4—H4B⋯O2ii 0.83 (3)2.17 (3)2.8485 (15)139 (2)
O4—H4B⋯O3ii 0.83 (3)2.38 (3)3.1283 (15)151 (2)
C8—H8⋯F1iii 0.94 (2)2.48 (2)3.3931 (17)164 (1)

Symmetry codes: (i) ; (ii) ; (iii) .

  12 in total

Review 1.  The role of chalcones in suppression of NF-κB-mediated inflammation and cancer.

Authors:  Vivek R Yadav; Sahdeo Prasad; Bokyung Sung; Bharat B Aggarwal
Journal:  Int Immunopharmacol       Date:  2010-12-22       Impact factor: 4.932

Review 2.  A review of anti-infective and anti-inflammatory chalcones.

Authors:  Zdzisława Nowakowska
Journal:  Eur J Med Chem       Date:  2006-11-15       Impact factor: 6.514

Review 3.  Antimitotic chalcones and related compounds as inhibitors of tubulin assembly.

Authors:  Sylvie Ducki
Journal:  Anticancer Agents Med Chem       Date:  2009-03       Impact factor: 2.505

Review 4.  Chalcones and their potential role in inflammation.

Authors:  C Kontogiorgis; M Mantzanidou; D Hadjipavlou-Litina
Journal:  Mini Rev Med Chem       Date:  2008-10       Impact factor: 3.862

Review 5.  The biology and chemistry of antifungal agents: a review.

Authors:  Muthu K Kathiravan; Amol B Salake; Aparna S Chothe; Prashik B Dudhe; Rahul P Watode; Maheshwar S Mukta; Sandeep Gadhwe
Journal:  Bioorg Med Chem       Date:  2012-05-09       Impact factor: 3.641

6.  Chalcones: structural requirements for antioxidant, estrogenic and antiproliferative activities.

Authors:  C A Calliste; J C Le Bail; P Trouillas; C Pouget; G Habrioux; A J Chulia; J L Duroux
Journal:  Anticancer Res       Date:  2001 Nov-Dec       Impact factor: 2.480

Review 7.  Recent progress in therapeutic applications of chalcones.

Authors:  Anna-Maria Katsori; Dimitra Hadjipavlou-Litina
Journal:  Expert Opin Ther Pat       Date:  2011-06-28       Impact factor: 6.674

Review 8.  Exploring pharmacological significance of chalcone scaffold: a review.

Authors:  N K Sahu; S S Balbhadra; J Choudhary; D V Kohli
Journal:  Curr Med Chem       Date:  2012       Impact factor: 4.530

Review 9.  Trends in utilization of the pharmacological potential of chalcones.

Authors:  Daniela Ilieva Batovska; Iva Todorova Todorova
Journal:  Curr Clin Pharmacol       Date:  2010-02

10.  Anticancer and antioxidant activity of synthetic chalcones and related compounds.

Authors:  R J Anto; K Sukumaran; G Kuttan; M N Rao; V Subbaraju; R Kuttan
Journal:  Cancer Lett       Date:  1995-10-20       Impact factor: 8.679

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