| Literature DB >> 23577114 |
Neus Pueyo1, Francisco J Ortega, Josep M Mercader, José M Moreno-Navarrete, Monica Sabater, Sílvia Bonàs, Patricia Botas, Elías Delgado, Wifredo Ricart, María T Martinez-Larrad, Manuel Serrano-Ríos, David Torrents, José M Fernández-Real.
Abstract
CONTEXT: Surfactant protein-D (SP-D) is a primordial component of the innate immune system intrinsically linked to metabolic pathways. We aimed to study the association of single nucleotide polymorphisms (SNPs) affecting SP-D with insulin resistance and type 2 diabetes (T2D). RESEARCH DESIGN AND METHODS: We evaluated a common genetic variant located in the SP-D coding region (rs721917, Met(31)Thr) in a sample of T2D patients and non-diabetic controls (n = 2,711). In a subset of subjects (n = 1,062), this SNP was analyzed in association with circulating SP-D concentrations, insulin resistance, and T2D. This SNP and others were also screened in the publicly available Genome Wide Association (GWA) database of the Meta-Analyses of Glucose and Insulin-related traits Consortium (MAGIC).Entities:
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Year: 2013 PMID: 23577114 PMCID: PMC3618429 DOI: 10.1371/journal.pone.0060468
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Subjects’ characteristics according to the single nucleotide polymorphism rs721917 (NC_000010.10:g.81706324A>G, Met31Thr) for SP-D gene.
| Genotype | AA | AG | GG | p | p | p |
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| 37 | 33 | 36 | |||
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| 51±12 | 52±12 | 53±12 | 0.431 | 0.275 | 0.215 |
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| 27.9±4.3 | 27.8±4.3 | 28.3±4.5 | 0.27 | 0.974 | 0.238 |
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| 0.95±0.07 | 0.96±0.08 | 0.95±0.06 | 0.111 | 0.158 | 0.868 |
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| 0.083 |
| 0.438 |
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| 0.076 |
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| 0.353 | 0.225 |
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| 0.894 |
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| 0.383 | 0.186 |
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| 5.3±1.4 | 5.2±1.2 | 5.3±1.1 | 0.363 | 0.217 | 0.562 |
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| 98.9±68.3 | 92.5±67.8 | 91.5±62.4 | 0.498 | 0.24 | 0.336 |
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| 17 | 17 | 17 | |||
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| 52±12 | 51±12 | 52±12 | 0.478 | 0.415 | 0.942 |
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| 29.5±7.3 | 28.8±6.4 | 29±6.2 | 0.189 | 0.073 | 0.339 |
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| 0.84±0.07 | 0.84±0.07 | 0.85±0.08 | 0.627 | 0.542 | 0.344 |
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| 0.152 |
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| 11.1±12 | 10.4±6.4 | 10.5±6.3 | 0.606 | 0.32 | 0.593 |
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| 37.2±35.2 | 35.4±35.7 | 32.2±42.5 | 0.67 | 0.523 | 0.384 |
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| 2.58±2.71 | 2.38±1.59 | 2.39±1.56 | 0.311 | 0.187 | 0.374 |
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T2D: Type 2 diabetes; BMI: Body mass index; WHR: Waist-to-hip ratio; HbA Glycated hemoglobin; HOMA Homeostasis model assessment of insulin resistance; SP-D: Surfactant protein-D.
These determinations were performed in a subpopulation of 1,062 subjects.
for the comparison by ANOVA among the different genotypes;
for the comparison by test t-student between AA and non-AA individuals, and
between AA and GG carriers in the whole cohort. Significant differences are shown in bold.
Figure 1Genotypes for rs721917 and measures of impaired glucose tolerance and circulating SP-D.
Mean and 95% confidence interval for fasting glucose (Fig. 1a) and glycated hemoglobin (Fig. 1b) for the whole cohort (n = 2,711), and for circulating SP-D concentration (Fig. 1c), fasting glucose (Fig. 1d) and glycated hemoglobin (Fig. 1d) in a subpopulation of subjects (n = 1,062) according to the genotypes for rs721917. Men: black bars, women: grey bars. *p<0.05 and #p<0.0001 for comparisons with AA-genotype.
Codominant, dominant, and Log-additive models for SP-D gene polymorphism rs721917 (NC_000010.10:g.81706324A>G, Met31Thr) in the whole cohort after correcting by origin of the sample, age, and sex-effects.
| No Type 2 Diabetes | Type 2 Diabetes | ||||||
| Model | N | % | N | % | OR | OR CI (95%) | P (> |z|) |
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| A/A | 790 | 34.8 | 178 | 40.5 |
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| A/G | 1102 | 48.5 | 203 | 46.1 |
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| G/G | 378 | 16.7 | 59 | 13.4 |
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| A/A | 790 | 34.8 | 178 | 40.5 |
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| A/G-G/G | 1480 | 65.2 | 262 | 59.5 |
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| (1, 2, 3) | 2270 | 83.8 | 440 | 16.2 |
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| A/A | 967 | 103.6 | 1.18 |
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| A/G | 1305 | 99.5 | 0.84 |
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| G/G | 437 | 98.9 | 1.27 |
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| A/A | 967 | 103.6 | 1.18 |
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| A/G-G/G | 1742 | 99.3 | 0.71 |
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| A/A | 537 | 5.33 | 0.059 |
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| A/G | 710 | 5.16 | 0.044 |
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| G/G | 256 | 5.11 | 0.058 |
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| A/A | 537 | 5.33 | 0.058 |
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| A/G-G/G | 966 | 5.15 | 0.036 |
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| A/A | 377 | 96.4 | 2.95 |
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| A/G | 494 | 88.3 | 2.45 |
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| G/G | 191 | 84.6 | 3.57 |
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| A/A | 377 | 96.4 | 2.95 |
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| A/G-G/G | 685 | 87.3 | 2.03 |
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| (1, 2, 3) |
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OR are odd ratios and OR CI (95%) are their respective 95% confidence interval (CI). P (> |z|) is the P-value of the z-test that tests if the regression coefficients of the model can be assumed to be zero. Significant differences are shown in bold.
Codominant, dominant, and Log-additive models for SP-D gene polymorphism rs721917 (NC_000010.10:g.81706324A>G, Met31Thr) after correcting by origin of the sample, age, sex, and concentrations of SP-D in plasma.
| No Type 2 Diabetes | Type 2 Diabetes | ||||||
| Model | N | % | N | % | OR | OR CI (95%) | P (> |z|) |
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| A/A | 272 | 34.1 | 105 | 39.6 |
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| A/G | 373 | 46.8 | 121 | 45.7 |
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| G/G | 152 | 19.1 | 39 | 14.7 |
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| A/A | 272 | 34.1 | 105 | 39.6 | 1 | 0.051 | |
| A/G-G/G | 525 | 65.9 | 160 | 60.4 | 0.73 | [0.54/1.00] | |
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| (1, 2, 3) | 797 | 75 | 265 | 25 |
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| A/A | 377 | 114.9 | 2.6 |
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| A/G | 494 | 109.4 | 1.97 |
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| G/G | 191 | 106.7 | 2.57 |
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| A/A | 377 | 114.9 | 2.66 |
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| A/G-G/G | 685 | 108.7 | 1.59 |
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| (1, 2, 3) | −5.28 | −8.88 | −1.68 |
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| A/A | 372 | 5.38 | 0.078 |
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| A/G | 488 | 5.22 | 0.058 |
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| G/G | 189 | 5.14 | 0.072 |
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| A/A | 372 | 5.38 | 0.078 |
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| A/G-G/G | 677 | 5.2 | 0.047 |
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| (1, 2, 3) | −0.15 | −0.25 | −0.05 |
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OR are odd ratios and OR CI (95%) are their respective 95% confidence interval (CI). P (> |z|) is the P-value of the z-test that tests if the regression coefficients of the model can be assumed to be zero. Significant differences are shown in bold.
Figure 2Regional association plot of chr.10.
Regional association plot of the chromosome 10 region for fasting insulin and HOMA-IR in MAGIC GWA.
Subjects’ characteristics according to the intergenic single nucleotide polymorphism rs10887344 (NC_000010.10:g.81768162G >A).
| Genotype | GG | GA | AA | p | p |
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| 65/82 | 135/145 | 84/112 | ||
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| 20 | 29 | 24 | ||
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| 52±13 | 53±12 | 51±13 | 0.139 | 0.251 |
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| 28.2±4.7 | 28.2±4.8 | 27.6±4.5 | 0.295 | 0.227 |
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| 0.88±0.07 | 0.89±0.09 | 0.87±0.09 | 0.054 | 0.382 |
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| 0.065 |
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| 117.1±56.7 | 116.8±50.3 | 108.4±43.2 | 0.166 | 0.128 |
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| 97.2±53.6 | 103.8±63.8 | 98.3±55.5 | 0.524 | 0.864 |
T2D: Type 2 diabetes; BMI: Body mass index; WHR: Waist-to-hip ratio; HbA Glycated hemoglobin; SP-D: Surfactant protein-D; MBL: Mannose binding lectin.
for the comparison by ANOVA among the different genotypes, and
for the comparison by test t-student between AA and GG carriers in the whole cohort. Significant differences are shown in bold.
Figure 3Genotypes for rs10887344 and measures of impaired glucose tolerance.
Mean and 95% confidence interval for fasting glucose (), fasting insulin (), HOMA-IR (), and glycated hemoglobin () according to the genotypes for rs10887344. Men: black bars, women: grey bars. *p<0.05 for comparisons with GG-genotype.