Literature DB >> 23548073

The supramolecular chemistry of β-sheets.

Pin-Nan Cheng1, Johnny D Pham, James S Nowick.   

Abstract

Interactions among β-sheets occur widely in protein quaternary structure, protein-protein interaction, and protein aggregation and are central in Alzheimer's and other amyloid-related diseases. This Perspective looks at the structural biology of these important yet under-appreciated interactions from a supramolecular chemist's point of view. Common themes in the supramolecular interactions of β-sheets are identified and richly illustrated though examples from proteins, amyloids, and chemical model systems. β-Sheets interact through edge-to-edge hydrogen bonding to form extended layers and through face-to-face hydrophobic or van der Waals interactions to form layered sandwich-like structures. Side chains from adjacent layers can fit together through simple hydrophobic contacts or can participate in complementary interdigitation or knob-hole interactions. The layers can be aligned, offset, or rotated. The right-handed twist of β-sheets provides additional opportunities for stabilization of edge-to-edge contacts and rotated layered structures.

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Year:  2013        PMID: 23548073      PMCID: PMC3642101          DOI: 10.1021/ja3088407

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  82 in total

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4.  Conformation of twisted beta-pleated sheets in proteins.

Authors:  C Chothia
Journal:  J Mol Biol       Date:  1973-04-05       Impact factor: 5.469

5.  Structure of a complex of two plasma proteins: transthyretin and retinol-binding protein.

Authors:  H L Monaco; M Rizzi; A Coda
Journal:  Science       Date:  1995-05-19       Impact factor: 47.728

6.  An unnatural amino acid that induces beta-sheet folding and interaction in peptides.

Authors:  James S Nowick; Kit S Lam; Tatyana V Khasanova; William E Kemnitzer; Santanu Maitra; Hao T Mee; Ruiwu Liu
Journal:  J Am Chem Soc       Date:  2002-05-08       Impact factor: 15.419

7.  Structure of the Val122Ile variant transthyretin - a cardiomyopathic mutant.

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Authors:  Omid Khakshoor; James S Nowick
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Journal:  Cell       Date:  2007-12-14       Impact factor: 41.582

10.  Amyloid β-sheet mimics that antagonize protein aggregation and reduce amyloid toxicity.

Authors:  Pin-Nan Cheng; Cong Liu; Minglei Zhao; David Eisenberg; James S Nowick
Journal:  Nat Chem       Date:  2012-09-09       Impact factor: 24.427

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  29 in total

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2.  In silico cross seeding of Aβ and amylin fibril-like oligomers.

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3.  Heterogeneous-Backbone Foldamer Mimics of Zinc Finger Tertiary Structure.

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Journal:  J Am Chem Soc       Date:  2017-06-05       Impact factor: 15.419

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Journal:  J Phys Chem B       Date:  2018-01-05       Impact factor: 2.991

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6.  β-Strand-mediated interactions of protein domains.

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7.  Mutations and seeding of amylin fibril-like oligomers.

Authors:  Nathan A Bernhardt; Workalemahu M Berhanu; Ulrich H E Hansmann
Journal:  J Phys Chem B       Date:  2013-12-02       Impact factor: 2.991

Review 8.  Scaffolds to control inflammation and facilitate dental pulp regeneration.

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Journal:  J Endod       Date:  2014-04       Impact factor: 4.171

9.  Covalent Linkage and Macrocylization Preserve and Enhance Synergistic Interactions in Catalytic Amyloids.

Authors:  Zsofia Lengyel-Zhand; Liam R Marshall; Maximilian Jung; Megha Jayachandran; Min-Chul Kim; Austin Kriews; Olga V Makhlynets; H Christopher Fry; Armin Geyer; Ivan V Korendovych
Journal:  Chembiochem       Date:  2020-11-06       Impact factor: 3.164

10.  Identification of β-strand mediated protein-protein interaction inhibitors using ligand-directed fragment ligation.

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Journal:  Chem Sci       Date:  2021-01-06       Impact factor: 9.825

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