Literature DB >> 23541038

Methylating the DNA of the most repressed: special access required.

Craig S Pikaard1.   

Abstract

A new study (Zemach et al., 2013) suggests that the chromatin remodeling ATPase DDM1 is specifically required for cytosine methylation at linker histone H1-associated heterochromatin, facilitating access by three cytosine methyltransferases, including a previously uncharacterized CHH methylase, CMT2.
Copyright © 2013 Elsevier Inc. All rights reserved.

Entities:  

Year:  2013        PMID： 23541038      PMCID： PMC3641553          DOI： 10.1016/j.molcel.2013.03.013

Source DB:  PubMed          Journal:  Mol Cell        ISSN： 1097-2765            Impact factor:   17.970


  9 in total

Review 1.  Multisubunit RNA polymerases IV and V: purveyors of non-coding RNA for plant gene silencing.

Authors:  Jeremy R Haag; Craig S Pikaard
Journal:  Nat Rev Mol Cell Biol       Date:  2011-07-22       Impact factor: 94.444

Review 2.  Lsh, a guardian of heterochromatin at repeat elements.

Authors:  Kathrin Muegge
Journal:  Biochem Cell Biol       Date:  2005-08       Impact factor: 3.626

Review 3.  Establishing, maintaining and modifying DNA methylation patterns in plants and animals.

Authors:  Julie A Law; Steven E Jacobsen
Journal:  Nat Rev Genet       Date:  2010-03       Impact factor: 53.242

Review 4.  RNA-directed DNA methylation.

Authors:  Huiming Zhang; Jian-Kang Zhu
Journal:  Curr Opin Plant Biol       Date:  2011-03-17       Impact factor: 7.834

5.  Arabidopsis thaliana DNA methylation mutants.

Authors:  A Vongs; T Kakutani; R A Martienssen; E J Richards
Journal:  Science       Date:  1993-06-25       Impact factor: 47.728

6.  Spatial and functional relationships among Pol V-associated loci, Pol IV-dependent siRNAs, and cytosine methylation in the Arabidopsis epigenome.

Authors:  Andrzej T Wierzbicki; Ross Cocklin; Anoop Mayampurath; Ryan Lister; M Jordan Rowley; Brian D Gregory; Joseph R Ecker; Haixu Tang; Craig S Pikaard
Journal:  Genes Dev       Date:  2012-08-01       Impact factor: 11.361

Review 7.  Structure of the '30 nm' chromatin fibre: a key role for the linker histone.

Authors:  Philip J J Robinson; Daniela Rhodes
Journal:  Curr Opin Struct Biol       Date:  2006-05-22       Impact factor: 6.809

8.  Shotgun bisulphite sequencing of the Arabidopsis genome reveals DNA methylation patterning.

Authors:  Shawn J Cokus; Suhua Feng; Xiaoyu Zhang; Zugen Chen; Barry Merriman; Christian D Haudenschild; Sriharsa Pradhan; Stanley F Nelson; Matteo Pellegrini; Steven E Jacobsen
Journal:  Nature       Date:  2008-02-17       Impact factor: 49.962

9.  An Arabidopsis jmjC domain protein protects transcribed genes from DNA methylation at CHG sites.

Authors:  Asuka Miura; Miyuki Nakamura; Soichi Inagaki; Akie Kobayashi; Hidetoshi Saze; Tetsuji Kakutani
Journal:  EMBO J       Date:  2009-03-05       Impact factor: 11.598
  9 in total
  6 in total

1.  Regulation of active DNA demethylation by an α-crystallin domain protein in Arabidopsis.

Authors:  Weiqiang Qian; Daisuke Miki; Mingguang Lei; Xiaohong Zhu; Huiming Zhang; Yunhua Liu; Yan Li; Zhaobo Lang; Jing Wang; Kai Tang; Renyi Liu; Jian-Kang Zhu
Journal:  Mol Cell       Date:  2014-07-04       Impact factor: 17.970

Review 2.  How can plant DNA viruses evade siRNA-directed DNA methylation and silencing?

Authors:  Mikhail M Pooggin
Journal:  Int J Mol Sci       Date:  2013-07-24       Impact factor: 5.923

3.  rDNA genetic imbalance and nucleolar chromatin restructuring is induced by distant hybridization between Raphanus sativus and Brassica alboglabra.

Authors:  Hong Long; Chunli Chen; Bing Wang; Yanni Feng
Journal:  PLoS One       Date:  2015-02-27       Impact factor: 3.240

4.  An AP endonuclease functions in active DNA demethylation and gene imprinting in Arabidopsis [corrected].

Authors:  Yan Li; Dolores Córdoba-Cañero; Weiqiang Qian; Xiaohong Zhu; Kai Tang; Huiming Zhang; Rafael R Ariza; Teresa Roldán-Arjona; Jian-Kang Zhu
Journal:  PLoS Genet       Date:  2015-01-08       Impact factor: 5.917

5.  Small RNA-Mediated De Novo Silencing of Ac/Ds Transposons Is Initiated by Alternative Transposition in Maize.

Authors:  Dafang Wang; Jianbo Zhang; Tao Zuo; Meixia Zhao; Damon Lisch; Thomas Peterson
Journal:  Genetics       Date:  2020-04-21       Impact factor: 4.562

6.  Epigenomics in an extraterrestrial environment: organ-specific alteration of DNA methylation and gene expression elicited by spaceflight in Arabidopsis thaliana.

Authors:  Mingqi Zhou; Natasha J Sng; Collin E LeFrois; Anna-Lisa Paul; Robert J Ferl
Journal:  BMC Genomics       Date:  2019-03-12       Impact factor: 4.547
  6 in total

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