| Literature DB >> 23536849 |
Ståle Tofteland1, Umaer Naseer, Jan Helge Lislevand, Arnfinn Sundsfjord, Orjan Samuelsen.
Abstract
BACKGROUND: To study the molecular characteristics of a long-term, low frequency outbreak of bla KPC-2 in a low prevalence setting involving the hospital environment. METHODOLOGY/PRINCIPALEntities:
Mesh:
Substances:
Year: 2013 PMID: 23536849 PMCID: PMC3594221 DOI: 10.1371/journal.pone.0059015
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Molecular characteristics of outbreak strains.
| Isolate | Source (P/E/F) 1 | Month of isolation | Species | PFGE | MLST |
|
|
| Plasmid profiling (kB) 3 | Plasmid hybridization |
| K47-25 | P1 | Nov 07 |
| A2 | 258 | KPC-2 | SHV-11/-12 | TEM-1 | 40, 97, 160 | 97,160 |
| K48-58 | P2 | March 08 |
| A2 | 258 | KPC-2 | SHV-11/-12 | TEM-1 | 97, 242 | 97 |
| K52-74 | P3 | Oct 08 |
| A2 | ND | KPC-2 | SHV-11/-12 | TEM-1 | 40, 97, 194 | 97 |
| K54-05 | P4 | Jan 09 |
| A2 | ND | KPC-2 | SHV-11 | TEM-1 | 40, 97/100 | 97 |
| K57-33 | P5 | March 09 |
| B | 461 | KPC-2 | SHV-1 | TEM-1 | 48, 97, 225 | 97 |
| K66-62 | P6 | April 10 |
| A1 | ND | KPC-2 | SHV-11/-12 | TEM-1 | 40, 97, 194 | 97 |
| K66-73 | P7/F | May 10 |
| A1 | 258 | KPC-2 | SHV-11/-12 | TEM-1 | 40, 97, 194 | 97 |
| K66-74 | P7/F | May 10 |
| C1 | - | KPC-2 | NEG | TEM-1 | 97,145 | 97 |
| K67-04 | P1 | Jan 10 |
| A1 | 258 | NEG | SHV-11/-12 | NEG | 40, 194 | NEG |
| K67-05 | P4 | May 09 |
| A2 | 258 | NEG | SHV-11/-12 | NEG | 40, 194 | NEG |
| K67-06 | P3 | March 10 |
| A2 | 258 | NEG | SHV-11/-12 | NEG | 40, 194 | NEG |
| K67-11 | E5 | June 10 |
| A2 | ND | KPC-2 | SHV-11/-12 | TEM-1 | 40, 97, 194 | 97 |
| K67-12 | E5 | June 10 |
| C2 | - | KPC-2 | NEG | TEM-1 | 97,145 | 97 |
| K67-13 | E6 | June 10 |
| D | 27 | KPC-2 | NEG | TEM-1 | 45, 97, 200 | 97 |
| K67-14 | E6 | June 10 |
| D | 27 | KPC | NEG | TEM-1 | 45, 97, 200 | 97 |
| K67-15 | E5 | June 10 |
| A1 | ND | KPC | SHV-11/-12 | TEM-1 | 40, 97, 194 | 97 |
| K67-16 | E5 | June 10 |
| C2 | - | KPC | NEG | TEM-1 | 97,145 | 97 |
P1–6 = clinical specimen from patients 1–6, P7/F = fecal screen patient 7, E = specimen from environmental screen (rooms 5, 6).
bla CTX-M was negative in all isolates. bla pAmpC was negative in isolates from patients 1–6, others ND.
Plasmid profiling (S1-nuclease digested DNA (kB)).
Plasmid DNA hybridization with bla KPC specific probes.
Clinical data and risk factors for outbreak patients.
| Isolate | Pat-ient | Species | Specimen | Hospita-lization abroad (country) | Month admitted | LOS6/LOS prior to diagnosis | Patient overlap7 | Antibiotic treatment8 | Other risk factors (I/S/R/D) | Role in infection | Discharged to |
| K47-25 | P1 |
| Expectorate | Greece | Nov 07 | 51/6 | Yes | MEM, PTZ | I/R | Uncertain | Home |
| K48-58 | P2 |
| Urine | No | March 08 | 20/8 | Yes | None | None | None | Nursing home |
| K52-74 | P3 |
| Blood | No | Sep 08 | 36/23 | No | MEM, TOB, CTX | I/R/D | Yes | Physical rehabilitation |
| K54-05 | P4 |
| Expectorate | No | Nov 08 | 106/47 | Yes4,
| MEM,TOB | I/R/D | Uncertain | Physical rehabilitation |
| K57-33 | P5 |
| Urine | No | Nov 08 | 178/131 | Yes | MEM, IMI | I/S/R | Uncertain | Nursing home |
| K66-62 | P6 |
| Expectorate | No | April 10 | 24†/17 | No | MEM | I/S/R | None | Diseased (in hospital) |
| K66-73 K66-74 | P7 |
| Feces/fecal screening | No | May 10 | 13/5 | No | CTX | I/R | None | Home |
Except urinary catheter.
I = admission to ICU, S = recent surgery (laparotomi), R = artificial ventilator use, D = subjected to haemodialysis.
Patient 1, being readmitted to SH-K, and patient 2 had been hospitalized in the same corridor for two days in March 2008 at SH-K although at separately staffed wards (Med. 2A-K and Med. 2C-K). Measures for contact isolation were not implemented for patient 1 on this occasion.
Patient 4 and patient 5 had been admitted simultaneously to the ICU-A, and had also been referred to a tertiary hospital (OUS-RH) at overlapping intervals.
Patient 3 and patient 4 were hospitalized in the ICU-A two days apart.
LOS = length of stay (days).
Overlap between patients in time and wards.
Anti G-negative antibiotics prior to diagnosis
Figure 1Dendrogram of XbaI-digested genomic DNA.
Strains of KPC-producing K. pneumoniae- and E.asburiae-isolates and ESBLA-producing K. pneumonia are shown with percentages of similarity to the right of the dendrogram.
Figure 2PFGE of S1 nuclease-digested total DNA.
Lanes 1 and 20, phage λ DNA ladder (concatemers of 48.5 kb); lane 2, K47-25; lane 3, K48-58; lane 4, K52-74; lane 5, K54-05; lane 6, K57-33; lane 7, K66-62; lane 8, K66-73; lane 9, K66-74; lane 10, K67-04; lane 11, K67-05; lane 12, K67-06; lane 13, K67-11; lane 14, K67-12; lane 15, K67-13; lane 16, K67-14; lane 17, K67-15; lane 18, K67-16; lane 19, K. pneumoniae bla KPC -negative control strain.