Literature DB >> 23483076

Description of Globodera ellingtonae n. sp. (Nematoda: Heteroderidae) from Oregon.

Zafar A Handoo1, Lynn K Carta, Andrea M Skantar, David J Chitwood.   

Abstract

A new species of cyst nematode, Globodera ellingtonae, is described from soil collected from a field in Oregon. Second-stage juveniles (J2) of the species are characterized by body length of 365-515 μm, stylet length of 19-22.5 μm, basal knobs rounded posteriorly and pointed anteriorly, tail 39-55 μm, hyaline tail terminus 20-32.5 μm, and tail tapering uniformly but abruptly narrowing and constricted near the posterior third of the hyaline portion, ending with a peg-like, finely rounded to pointed terminus. Cysts are spherical to sub-spherical, dark to light brown and circumfenestrate and cyst wall pattern is ridge-like with heavy punctations. Males have a stylet length of 21-25 μm and spicule length of 30-37 μm with a pointed thorn-like tip. Females have a stylet length of 20-22.5 μm, one head annule and labial disc, heavy punctations on the cuticle, and short vulval slit 7.5-8 μm long. Morphologically this new, round-cyst species differs from the related species G. pallida, G. rostochiensis, G. tabacum complex and G. mexicana by its distinctive J2 tail, and by one or another of the following: shorter mean stylet length in J2, females and males; number of refractive bodies in the hyaline tail terminus of J2; cyst morphology including Granek's ratio; number of cuticular ridges between the anus and vulva; and in the shape and length of spicules in males. Its relationship to these closely related species are discussed. Based upon analysis of ribosomal internal transcribed spacer (ITS) sequences, G. ellingtonae n. sp. is distinct from G. pallida, G. rostochiensis, G. tabacum and G. mexicana. Bayesian and Maximum Parsimony analysis of cloned ITS rRNA gene sequences indicated three clades, with intraspecific variability as high as 2.8%. In silico analysis revealed ITS restriction fragment length polymorphisms for enzymes Bsh 1236I, Hinf I, and Rsa I that overlap patterns for other Globodera species.

Entities:  

Keywords:  Globodera ellingtonae; RFLP; Solanum tuberosum; detection; diagnosis; morphology; new species; potato; taxonomy

Year:  2012        PMID: 23483076      PMCID: PMC3593265     

Source DB:  PubMed          Journal:  J Nematol        ISSN: 0022-300X            Impact factor:   1.402


  23 in total

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Authors:  Damien Picard; Thierry Sempere; Olivier Plantard
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3.  AWTY (are we there yet?): a system for graphical exploration of MCMC convergence in Bayesian phylogenetics.

Authors:  Johan A A Nylander; James C Wilgenbusch; Dan L Warren; David L Swofford
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4.  DNA sequences from formalin-fixed nematodes: integrating molecular and morphological approaches to taxonomy.

Authors:  W K Thomas; J T Vida; L M Frisse; M Mundo; J G Baldwin
Journal:  J Nematol       Date:  1997-09       Impact factor: 1.402

5.  jModelTest: phylogenetic model averaging.

Authors:  David Posada
Journal:  Mol Biol Evol       Date:  2008-04-08       Impact factor: 16.240

6.  Origin and genetic diversity of Western European populations of the potato cyst nematode (Globodera pallida) inferred from mitochondrial sequences and microsatellite loci.

Authors:  O Plantard; D Picard; S Valette; M Scurrah; E Grenier; D Mugniéry
Journal:  Mol Ecol       Date:  2008-04-10       Impact factor: 6.185

7.  Quantitative detection of the potato cyst nematode, Globodera pallida, and the beet cyst nematode, Heterodera schachtii, using Real-Time PCR with SYBR green I dye.

Authors:  Mehrdad Madani; Sergei A Subbotin; Maurice Moens
Journal:  Mol Cell Probes       Date:  2004-12-23       Impact factor: 2.365

8.  Molecular phylogenetics and the evolution of host plant associations in the nematode genus Fergusobia (Tylenchida: Fergusobiinae).

Authors:  Weimin Ye; Robin M Giblin-Davis; Kerrie A Davies; Matthew F Purcell; Sonja J Scheffer; Gary S Taylor; Ted D Center; Krystalynne Morris; W Kelley Thomas
Journal:  Mol Phylogenet Evol       Date:  2007-03-12       Impact factor: 4.286

9.  Identification of Cyst Nematodes of Agronomic and Regulatory Concern with PCR-RFLP of ITS1.

Authors:  A L Szalanski; D D Sui; T S Harris; T O Powers
Journal:  J Nematol       Date:  1997-09       Impact factor: 1.402

10.  Morphological and Molecular Identification of Globodera pallida Associated with Potato in Idaho.

Authors:  A M Skantar; Z A Handoo; L K Carta; D J Chitwood
Journal:  J Nematol       Date:  2007-06       Impact factor: 1.402

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  11 in total

1.  The Draft Genome of Globodera ellingtonae.

Authors:  Wendy S Phillips; Dana K Howe; Amanda M V Brown; Sebastian Eves-van den Akker; Levi Dettwyler; Amy B Peetz; Dee R Denver; Inga A Zasada
Journal:  J Nematol       Date:  2017-06       Impact factor: 1.402

2.  Draft Transcriptome of Globodera ellingtonae.

Authors:  Wendy S Phillips; Sebastian Eves-van den Akker; Inga A Zasada
Journal:  J Nematol       Date:  2017-06       Impact factor: 1.402

3.  Host Status of Different Potato (Solanum tuberosum) Varieties and Hatching in Root Diffusates of Globodera ellingtonae.

Authors:  Inga A Zasada; Amy Peetz; Nadine Wade; Roy A Navarre; Russ E Ingham
Journal:  J Nematol       Date:  2013-09       Impact factor: 1.402

4.  Effect of Storage Environment on Hatching of the Cyst Nematode Globodera ellingtonae.

Authors:  Russell E Ingham; Duncan Kroese; Inga A Zasada
Journal:  J Nematol       Date:  2015-03       Impact factor: 1.402

5.  The Relationship between Temperature and Development in Globodera ellingtonae.

Authors:  Wendy S Phillips; Shannon Rose Kieran; Inga A Zasada
Journal:  J Nematol       Date:  2015-12       Impact factor: 1.402

6.  The mitochondrial genome of Globodera ellingtonae is composed of two circles with segregated gene content and differential copy numbers.

Authors:  Wendy S Phillips; Amanda M V Brown; Dana K Howe; Amy B Peetz; Vivian C Blok; Dee R Denver; Inga A Zasada
Journal:  BMC Genomics       Date:  2016-09-05       Impact factor: 3.969

7.  Duplication of hsp-110 Is Implicated in Differential Success of Globodera Species under Climate Change.

Authors:  Laura M Jones; Sebastian Eves-van den Akker; Patricija van-Oosten Hawle; Howard J Atkinson; Peter E Urwin
Journal:  Mol Biol Evol       Date:  2018-10-01       Impact factor: 16.240

8.  Effect of the trap crop, Solanum sisymbriifolium, on Globodera pallida, Globodera tabacum, and Globodera ellingtonae.

Authors:  L M Dandurand; I A Zasada; J A LaMondia
Journal:  J Nematol       Date:  2019       Impact factor: 1.402

Review 9.  Resisting Potato Cyst Nematodes With Resistance.

Authors:  Ulrike Gartner; Ingo Hein; Lynn H Brown; Xinwei Chen; Sophie Mantelin; Sanjeev K Sharma; Louise-Marie Dandurand; Joseph C Kuhl; John T Jones; Glenn J Bryan; Vivian C Blok
Journal:  Front Plant Sci       Date:  2021-03-25       Impact factor: 5.753

10.  The hidden diversity of the potato cyst nematode Globodera pallida in the south of Peru.

Authors:  Romain Thevenoux; Laurent Folcher; Magali Esquibet; Didier Fouville; Josselin Montarry; Eric Grenier
Journal:  Evol Appl       Date:  2019-12-03       Impact factor: 5.183

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