Literature DB >> 23476433

2-(4-Meth-oxy-phen-yl)-1-pentyl-4,5-di-phenyl-1H-imidazole.

Jim Simpson1, Shaaban K Mohamed, Adel A Marzouk, Avtandil H Talybov, Antar A Abdelhamid.   

Abstract

The title compound, C27H28N2O, is a lophine (2,4,5-triphenyl-1H-imidazole) derivative with an n-pentyl chain on the amine N atom and a 4-meth-oxy substituent on the benzene ring. The two phenyl and meth-oxy-benzene rings are inclined to the imidazole ring at angles of 25.32 (7), 76.79 (5) and 35.42 (7)°, respectively, while the meth-oxy substituent lies close to the plane of its benzene ring, with a maximum deviation of 0.126 (3) Å for the meth-oxy C atom. In the crystal, inversion dimers linked by pairs of C-H⋯O hydrogen bonds generate R2(2)(22) loops. These dimers are stacked along the a-axis direction.

Entities:  

Year:  2012        PMID: 23476433      PMCID: PMC3588259          DOI: 10.1107/S1600536812049100

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the non-linear optical and chemiluminescence properties of lophine and its derivatives, see: Santos et al. (2001 ▶); Radziszewski (1877 ▶); Maeda & Hayashi (1969 ▶, 1970 ▶). For the bioactivity of imidazoles, see: Antolini et al. (1999 ▶); Eyers et al. (1998 ▶); Laszlo et al. (1999 ▶); Newman et al. (2000 ▶); Veisi et al. (2012 ▶); Wang et al. (2002 ▶). For related structures, see, for example: Yanover & Kaftory (2009a ▶,b ▶); Kison & Opatz (2009 ▶); Zhao et al. (2012 ▶). For representative bond lengths, see: Allen et al. (1987 ▶) and for hydrogen-bond motifs, see: Bernstein et al. (1995 ▶).

Experimental

Crystal data

C27H28N2O M = 396.51 Triclinic, a = 9.7214 (19) Å b = 10.739 (1) Å c = 11.7367 (10) Å α = 114.069 (4)° β = 99.021 (6)° γ = 95.425 (6)° V = 1087.7 (3) Å3 Z = 2 Mo Kα radiation μ = 0.07 mm−1 T = 93 K 0.47 × 0.18 × 0.08 mm

Data collection

Bruker APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2011 ▶) T min = 0.619, T max = 0.746 15574 measured reflections 4968 independent reflections 3542 reflections with I > 2σ(I) R int = 0.043

Refinement

R[F 2 > 2σ(F 2)] = 0.048 wR(F 2) = 0.132 S = 1.06 4968 reflections 273 parameters H-atom parameters constrained Δρmax = 0.21 e Å−3 Δρmin = −0.25 e Å−3 Data collection: APEX2 (Bruker, 2011 ▶); cell refinement: APEX2 and SAINT (Bruker, 2011 ▶); data reduction: SAINT (Bruker, 2011 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶) and TITAN2000 (Hunter & Simpson, 1999 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶) and TITAN2000; molecular graphics: SHELXTL (Sheldrick, 2008 ▶) and Mercury (Macrae et al., 2008 ▶); software used to prepare material for publication: SHELXL97, enCIFer (Allen et al., 2004 ▶), PLATON (Spek, 2009 ▶) and publCIF (Westrip, 2010 ▶). Click here for additional data file. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812049100/bt6874sup1.cif Click here for additional data file. Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812049100/bt6874Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536812049100/bt6874Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C27H28N2OZ = 2
Mr = 396.51F(000) = 424
Triclinic, P1Dx = 1.211 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 9.7214 (19) ÅCell parameters from 3238 reflections
b = 10.739 (1) Åθ = 2.6–26.1°
c = 11.7367 (10) ŵ = 0.07 mm1
α = 114.069 (4)°T = 93 K
β = 99.021 (6)°Rectangular plate, colourless
γ = 95.425 (6)°0.47 × 0.18 × 0.08 mm
V = 1087.7 (3) Å3
Bruker APEXII CCD area-detector diffractometer4968 independent reflections
Radiation source: fine-focus sealed tube3542 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.043
ω scansθmax = 27.6°, θmin = 3.1°
Absorption correction: multi-scan (SADABS; Bruker, 2011)h = −12→12
Tmin = 0.619, Tmax = 0.746k = −13→14
15574 measured reflectionsl = −15→15
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.048Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.132H-atom parameters constrained
S = 1.06w = 1/[σ2(Fo2) + (0.0663P)2 + 0.0245P] where P = (Fo2 + 2Fc2)/3
4968 reflections(Δ/σ)max < 0.001
273 parametersΔρmax = 0.21 e Å3
0 restraintsΔρmin = −0.25 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.65447 (14)1.04609 (14)0.93573 (12)0.0209 (3)
C20.63626 (14)0.90460 (14)0.87092 (12)0.0208 (3)
N20.73101 (12)0.86376 (11)0.94408 (10)0.0214 (3)
C30.80178 (14)0.98139 (14)1.04912 (13)0.0206 (3)
N10.75725 (12)1.09265 (12)1.04654 (10)0.0218 (3)
C40.58701 (15)1.14575 (14)0.89992 (12)0.0213 (3)
C50.65877 (16)1.28159 (15)0.94687 (13)0.0252 (3)
H50.74901.30861.00310.030*
C60.60042 (16)1.37763 (15)0.91278 (14)0.0276 (3)
H60.65071.46960.94540.033*
C70.46848 (16)1.33933 (16)0.83088 (14)0.0290 (4)
H70.42881.40450.80640.035*
C80.39535 (17)1.20596 (16)0.78529 (14)0.0283 (4)
H80.30451.17980.73020.034*
C90.45371 (15)1.11015 (15)0.81940 (13)0.0244 (3)
H90.40221.01880.78750.029*
C100.54830 (15)0.80462 (14)0.74497 (13)0.0210 (3)
C110.42624 (16)0.71869 (15)0.73438 (14)0.0279 (4)
H110.39700.72260.80910.033*
C120.34667 (17)0.62676 (16)0.61431 (15)0.0334 (4)
H120.26370.56770.60770.040*
C130.38700 (17)0.62053 (16)0.50497 (14)0.0310 (4)
H130.33210.55770.42330.037*
C140.50733 (17)0.70598 (16)0.51489 (14)0.0329 (4)
H140.53530.70260.43980.040*
C150.58783 (16)0.79690 (15)0.63386 (13)0.0280 (4)
H150.67130.85480.63960.034*
C160.90797 (15)0.98543 (14)1.15551 (13)0.0216 (3)
C171.00822 (15)0.89913 (15)1.14112 (13)0.0240 (3)
H171.01020.83291.05790.029*
C181.10545 (15)0.90705 (15)1.24484 (13)0.0249 (3)
H181.17230.84621.23260.030*
C191.10445 (15)1.00433 (15)1.36650 (13)0.0243 (3)
O1191.19783 (10)1.02238 (11)1.47489 (9)0.0288 (3)
C1191.28969 (17)0.92355 (17)1.46185 (15)0.0351 (4)
H11A1.23320.83031.42560.053*
H11B1.34710.94421.54590.053*
H11C1.35180.92831.40500.053*
C201.00777 (15)1.09470 (15)1.38280 (13)0.0255 (3)
H201.00871.16331.46580.031*
C210.91080 (15)1.08526 (15)1.27931 (13)0.0242 (3)
H210.84501.14711.29180.029*
C220.75400 (15)0.72148 (14)0.90983 (13)0.0228 (3)
H22A0.66250.65740.86690.027*
H22B0.79080.71140.98860.027*
C230.85838 (15)0.68150 (14)0.82145 (13)0.0241 (3)
H23A0.81030.66480.73440.029*
H23B0.93790.75990.85180.029*
C240.91712 (16)0.55285 (15)0.81503 (14)0.0260 (3)
H24A0.96240.56800.90240.031*
H24B0.83810.47340.78140.031*
C251.02476 (16)0.51780 (16)0.73060 (14)0.0311 (4)
H25A0.97620.49060.64110.037*
H25B1.09660.60170.75710.037*
C261.09912 (18)0.40151 (16)0.73654 (16)0.0359 (4)
H26A1.15290.43010.82370.054*
H26B1.16370.38090.67750.054*
H26C1.02860.31850.71220.054*
U11U22U33U12U13U23
C10.0207 (7)0.0229 (7)0.0170 (7)0.0013 (6)0.0033 (6)0.0072 (6)
C20.0205 (7)0.0251 (7)0.0170 (7)0.0031 (6)0.0037 (5)0.0097 (6)
N20.0241 (6)0.0216 (6)0.0168 (6)0.0025 (5)0.0030 (5)0.0075 (5)
C30.0221 (7)0.0216 (7)0.0172 (7)0.0025 (6)0.0059 (6)0.0071 (6)
N10.0229 (6)0.0238 (6)0.0180 (6)0.0035 (5)0.0047 (5)0.0081 (5)
C40.0243 (7)0.0244 (7)0.0154 (7)0.0067 (6)0.0074 (6)0.0070 (6)
C50.0268 (8)0.0255 (8)0.0196 (7)0.0052 (6)0.0032 (6)0.0066 (6)
C60.0352 (9)0.0212 (7)0.0255 (8)0.0044 (6)0.0090 (7)0.0083 (6)
C70.0373 (9)0.0294 (8)0.0235 (8)0.0136 (7)0.0083 (7)0.0124 (7)
C80.0292 (8)0.0331 (8)0.0209 (7)0.0088 (7)0.0034 (6)0.0098 (7)
C90.0259 (8)0.0235 (8)0.0211 (7)0.0045 (6)0.0054 (6)0.0067 (6)
C100.0229 (7)0.0201 (7)0.0182 (7)0.0053 (6)0.0031 (6)0.0067 (6)
C110.0296 (8)0.0271 (8)0.0222 (7)0.0021 (6)0.0084 (6)0.0056 (6)
C120.0265 (8)0.0299 (8)0.0327 (9)−0.0018 (7)0.0048 (7)0.0047 (7)
C130.0321 (9)0.0293 (8)0.0208 (7)0.0055 (7)−0.0042 (6)0.0038 (6)
C140.0405 (9)0.0363 (9)0.0184 (7)0.0037 (7)0.0042 (7)0.0096 (7)
C150.0292 (8)0.0305 (8)0.0223 (7)−0.0008 (6)0.0031 (6)0.0116 (7)
C160.0223 (7)0.0227 (7)0.0187 (7)0.0009 (6)0.0033 (6)0.0089 (6)
C170.0254 (8)0.0257 (8)0.0177 (7)0.0023 (6)0.0049 (6)0.0065 (6)
C180.0225 (8)0.0286 (8)0.0238 (7)0.0046 (6)0.0053 (6)0.0114 (6)
C190.0217 (7)0.0316 (8)0.0189 (7)−0.0009 (6)0.0008 (6)0.0128 (6)
O1190.0271 (6)0.0383 (6)0.0204 (5)0.0066 (5)0.0007 (4)0.0135 (5)
C1190.0310 (9)0.0456 (10)0.0290 (8)0.0105 (8)−0.0007 (7)0.0180 (8)
C200.0277 (8)0.0267 (8)0.0185 (7)0.0024 (6)0.0055 (6)0.0064 (6)
C210.0243 (8)0.0255 (7)0.0210 (7)0.0040 (6)0.0048 (6)0.0084 (6)
C220.0249 (7)0.0206 (7)0.0214 (7)0.0022 (6)0.0013 (6)0.0092 (6)
C230.0268 (8)0.0234 (7)0.0188 (7)0.0033 (6)0.0026 (6)0.0068 (6)
C240.0276 (8)0.0263 (8)0.0227 (7)0.0054 (6)0.0037 (6)0.0095 (6)
C250.0320 (9)0.0300 (8)0.0292 (8)0.0073 (7)0.0080 (7)0.0097 (7)
C260.0339 (9)0.0317 (9)0.0369 (9)0.0088 (7)0.0076 (7)0.0091 (7)
C1—C21.3721 (19)C16—C171.390 (2)
C1—N11.3811 (17)C16—C211.4045 (19)
C1—C41.4716 (19)C17—C181.3864 (19)
C2—N21.3833 (17)C17—H170.9500
C2—C101.4848 (18)C18—C191.386 (2)
N2—C31.3742 (17)C18—H180.9500
N2—C221.4622 (17)C19—O1191.3724 (16)
C3—N11.3188 (17)C19—C201.393 (2)
C3—C161.4730 (19)O119—C1191.4272 (18)
C4—C91.3950 (19)C119—H11A0.9800
C4—C51.396 (2)C119—H11B0.9800
C5—C61.386 (2)C119—H11C0.9800
C5—H50.9500C20—C211.3772 (19)
C6—C71.389 (2)C20—H200.9500
C6—H60.9500C21—H210.9500
C7—C81.381 (2)C22—C231.529 (2)
C7—H70.9500C22—H22A0.9900
C8—C91.384 (2)C22—H22B0.9900
C8—H80.9500C23—C241.5225 (19)
C9—H90.9500C23—H23A0.9900
C10—C151.389 (2)C23—H23B0.9900
C10—C111.389 (2)C24—C251.521 (2)
C11—C121.392 (2)C24—H24A0.9900
C11—H110.9500C24—H24B0.9900
C12—C131.378 (2)C25—C261.521 (2)
C12—H120.9500C25—H25A0.9900
C13—C141.375 (2)C25—H25B0.9900
C13—H130.9500C26—H26A0.9800
C14—C151.384 (2)C26—H26B0.9800
C14—H140.9500C26—H26C0.9800
C15—H150.9500
C2—C1—N1110.31 (12)C18—C17—C16121.84 (13)
C2—C1—C4129.52 (12)C18—C17—H17119.1
N1—C1—C4120.10 (12)C16—C17—H17119.1
C1—C2—N2105.42 (11)C19—C18—C17119.52 (14)
C1—C2—C10132.42 (13)C19—C18—H18120.2
N2—C2—C10121.98 (12)C17—C18—H18120.2
C3—N2—C2107.27 (11)O119—C19—C18124.04 (13)
C3—N2—C22127.52 (12)O119—C19—C20116.28 (12)
C2—N2—C22125.14 (11)C18—C19—C20119.63 (13)
N1—C3—N2111.01 (12)C19—O119—C119117.07 (11)
N1—C3—C16123.28 (12)O119—C119—H11A109.5
N2—C3—C16125.62 (12)O119—C119—H11B109.5
C3—N1—C1105.98 (11)H11A—C119—H11B109.5
C9—C4—C5118.02 (13)O119—C119—H11C109.5
C9—C4—C1122.72 (13)H11A—C119—H11C109.5
C5—C4—C1119.25 (13)H11B—C119—H11C109.5
C6—C5—C4121.02 (13)C21—C20—C19120.41 (13)
C6—C5—H5119.5C21—C20—H20119.8
C4—C5—H5119.5C19—C20—H20119.8
C5—C6—C7119.98 (14)C20—C21—C16120.87 (14)
C5—C6—H6120.0C20—C21—H21119.6
C7—C6—H6120.0C16—C21—H21119.6
C8—C7—C6119.63 (14)N2—C22—C23112.03 (12)
C8—C7—H7120.2N2—C22—H22A109.2
C6—C7—H7120.2C23—C22—H22A109.2
C7—C8—C9120.34 (14)N2—C22—H22B109.2
C7—C8—H8119.8C23—C22—H22B109.2
C9—C8—H8119.8H22A—C22—H22B107.9
C8—C9—C4121.00 (14)C24—C23—C22113.10 (12)
C8—C9—H9119.5C24—C23—H23A109.0
C4—C9—H9119.5C22—C23—H23A109.0
C15—C10—C11118.59 (13)C24—C23—H23B109.0
C15—C10—C2119.43 (13)C22—C23—H23B109.0
C11—C10—C2121.97 (13)H23A—C23—H23B107.8
C10—C11—C12120.06 (14)C25—C24—C23112.34 (12)
C10—C11—H11120.0C25—C24—H24A109.1
C12—C11—H11120.0C23—C24—H24A109.1
C13—C12—C11120.69 (15)C25—C24—H24B109.1
C13—C12—H12119.7C23—C24—H24B109.1
C11—C12—H12119.7H24A—C24—H24B107.9
C14—C13—C12119.50 (14)C26—C25—C24113.26 (14)
C14—C13—H13120.2C26—C25—H25A108.9
C12—C13—H13120.2C24—C25—H25A108.9
C13—C14—C15120.24 (15)C26—C25—H25B108.9
C13—C14—H14119.9C24—C25—H25B108.9
C15—C14—H14119.9H25A—C25—H25B107.7
C14—C15—C10120.91 (15)C25—C26—H26A109.5
C14—C15—H15119.5C25—C26—H26B109.5
C10—C15—H15119.5H26A—C26—H26B109.5
C17—C16—C21117.68 (13)C25—C26—H26C109.5
C17—C16—C3124.27 (12)H26A—C26—H26C109.5
C21—C16—C3118.03 (13)H26B—C26—H26C109.5
D—H···AD—HH···AD···AD—H···A
C15—H15···O119i0.952.613.4393 (19)146
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
C15—H15⋯O119i 0.952.613.4393 (19)146

Symmetry code: (i) .

  11 in total

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Authors:  M Antolini; A Bozzoli; C Ghiron; G Kennedy; T Rossi; A Ursini
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Journal:  J Med Chem       Date:  2002-04-11       Impact factor: 7.446

5.  Modular synthesis of tetrasubstituted imidazoles and trisubstituted oxazoles by aldimine cross-coupling.

Authors:  Coralie Kison; Till Opatz
Journal:  Chemistry       Date:  2009       Impact factor: 5.236

6.  Lophine (2,4,5-triphenyl-1H-imidazole).

Authors:  Diana Yanover; Menahem Kaftory
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-03-06

7.  Structural comparisons between methylated and unmethylated nitrophenyl lophines.

Authors:  Diana Yanover; Menahem Kaftory
Journal:  Acta Crystallogr C       Date:  2009-07-07       Impact factor: 1.172

8.  Conversion of SB 203580-insensitive MAP kinase family members to drug-sensitive forms by a single amino-acid substitution.

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9.  1,2,4,5-Tetra-phenyl-1H-imidazole.

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10.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
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