Literature DB >> 21582448

Lophine (2,4,5-triphenyl-1H-imidazole).

Diana Yanover1, Menahem Kaftory.   

Abstract

The title compound, C(21)H(16)N(2), has been known since 1877. Although the crystal structure of 36 derivatives of lophine are known, the structure of parent compound has remained unknown until now. The three phenyl rings bonded to the imidazole core are not coplanar with the latter, with dihedral angles of 21.4 (3), 24.7 (3), and 39.0 (3)°, respectively, between the phenyl ring planes in the 2-, 4- and 5-positions of the imidazole ring. The mol-ecules are packed in layers running perpendicular to the b axis. Although there are acceptor and donor atoms for hydrogen bonds, no such inter-actions are detected in the crystal in contrast to other lophine derivatives.

Entities:  

Year:  2009        PMID: 21582448      PMCID: PMC2968781          DOI: 10.1107/S1600536809006552

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background on lophine and its derivatives, see: Fridman et al. (2008 ▶); Fridman, Kaftory & Speiser (2007 ▶); Fridman, Kaftory, Eichen & Speiser (2007 ▶); Kamidate et al. (1989 ▶); Liu et al. (2005 ▶); Nakashima (2003 ▶); Nakashima et al. (1995 ▶); Radziszewski (1877 ▶); Seethalakshmi et al. (2006 ▶); Thiruvalluvar et al. (2007 ▶); Thuer et al. (2004 ▶). For information about the Cambridge Database, see: Allen (2002 ▶). For related literature, see: Inouye & Sakaino (2000 ▶); Kaftory et al. (1998 ▶); Santos et al. (2001 ▶).

Experimental

Crystal data

C21H16N2 M = 296.36 Orthorhombic, a = 20.218 (4) Å b = 7.538 (2) Å c = 20.699 (4) Å V = 3154.6 (12) Å3 Z = 8 Mo Kα radiation μ = 0.07 mm−1 T = 293 K 0.50 × 0.10 × 0.05 mm

Data collection

Nonius KappaCCD diffractometer Absorption correction: none 22192 measured reflections 2747 independent reflections 1036 reflections with I > 2σ(I) R int = 0.143

Refinement

R[F 2 > 2σ(F 2)] = 0.088 wR(F 2) = 0.245 S = 1.09 2747 reflections 209 parameters H-atom parameters constrained Δρmax = 0.25 e Å−3 Δρmin = −0.30 e Å−3 Data collection: COLLECT (Nonius, 2006); cell refinement: DENZO HKL-2000 (Otwinowski & Minor, 1997 ▶); data reduction: DENZO HKL-2000; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1999 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809006552/hb2915sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809006552/hb2915Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C21H16N2F(000) = 1248
Mr = 296.36Dx = 1.248 Mg m3
Orthorhombic, PbcaMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ac 2abCell parameters from 22192 reflections
a = 20.218 (4) Åθ = 2.0–25.3°
b = 7.538 (2) ŵ = 0.07 mm1
c = 20.699 (4) ÅT = 293 K
V = 3154.6 (12) Å3Plate, colorless
Z = 80.50 × 0.10 × 0.05 mm
Nonius KappaCCD diffractometer1036 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.143
graphiteθmax = 25.3°, θmin = 2.0°
φ and ω scansh = −23→22
22192 measured reflectionsk = −8→8
2747 independent reflectionsl = −24→23
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.088H-atom parameters constrained
wR(F2) = 0.245w = 1/[σ2(Fo2) + (0.0863P)2] where P = (Fo2 + 2Fc2)/3
S = 1.09(Δ/σ)max < 0.001
2747 reflectionsΔρmax = 0.25 e Å3
209 parametersΔρmin = −0.30 e Å3
0 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.0089 (18)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
N10.6928 (2)0.1996 (5)0.14220 (18)0.0556 (11)
H10.68090.18060.10290.067*
N20.7563 (2)0.2458 (5)0.2252 (2)0.0668 (12)
C10.8110 (3)0.1974 (7)0.1209 (3)0.0660 (14)
C20.8052 (3)0.2208 (9)0.0564 (3)0.0928 (19)
H20.76200.24370.03900.111*
C30.8616 (4)0.2073 (9)0.0170 (3)0.108 (2)
H30.85700.2267−0.02860.129*
C40.9225 (3)0.1634 (8)0.0422 (3)0.0890 (19)
H40.96110.15170.01550.107*
C50.9267 (3)0.1408 (8)0.1067 (4)0.0902 (19)
H50.96940.11340.12440.108*
C60.8727 (3)0.1565 (7)0.1470 (3)0.0822 (18)
H60.87780.14080.19270.099*
C70.7536 (3)0.2141 (7)0.1634 (3)0.0767 (16)
C80.6519 (3)0.2205 (6)0.1946 (3)0.0672 (14)
C90.6911 (3)0.2496 (6)0.2465 (3)0.0690 (14)
C100.6777 (3)0.2762 (7)0.3158 (2)0.0689 (15)
C110.6295 (3)0.1845 (7)0.3489 (3)0.0771 (16)
H110.60280.10110.32550.093*
C120.6206 (3)0.2137 (9)0.4140 (3)0.0876 (18)
H120.58700.15090.43750.105*
C130.6578 (4)0.3288 (10)0.4475 (3)0.098 (2)
H130.65030.34690.49280.118*
C140.7082 (4)0.4240 (10)0.4148 (3)0.098 (2)
H140.73550.50900.43670.118*
C150.7179 (3)0.3959 (8)0.3504 (3)0.0841 (18)
H150.75310.45480.32790.101*
C160.5797 (3)0.2127 (7)0.1838 (2)0.0673 (15)
C170.5352 (3)0.3003 (7)0.2245 (3)0.0739 (16)
H170.55230.36360.26110.089*
C180.4681 (3)0.2945 (8)0.2130 (3)0.0827 (17)
H180.43830.35680.24110.099*
C190.4436 (3)0.2035 (9)0.1613 (3)0.0944 (19)
H190.39680.19830.15360.113*
C200.4872 (4)0.1191 (8)0.1199 (3)0.095 (2)
H200.46970.05570.08350.114*
C210.5545 (3)0.1206 (7)0.1311 (3)0.0805 (17)
H210.58460.06150.10240.097*
U11U22U33U12U13U23
N10.056 (3)0.067 (2)0.044 (2)0.000 (2)−0.008 (2)−0.0054 (19)
N20.065 (3)0.072 (3)0.064 (3)−0.005 (2)0.003 (3)0.005 (2)
C10.069 (4)0.066 (3)0.062 (4)0.004 (3)−0.003 (3)0.001 (3)
C20.077 (5)0.133 (5)0.068 (4)0.024 (4)−0.010 (4)−0.006 (4)
C30.120 (6)0.138 (6)0.065 (4)0.011 (5)0.008 (4)−0.004 (4)
C40.076 (5)0.097 (4)0.094 (5)0.009 (3)0.005 (4)0.007 (4)
C50.074 (5)0.094 (4)0.102 (5)0.003 (3)−0.003 (4)0.018 (4)
C60.085 (5)0.087 (4)0.074 (4)−0.016 (3)−0.011 (4)0.012 (3)
C70.094 (5)0.068 (3)0.068 (4)−0.003 (3)−0.002 (4)0.008 (3)
C80.074 (4)0.060 (3)0.068 (4)0.002 (3)−0.005 (3)0.003 (3)
C90.082 (4)0.056 (3)0.070 (4)−0.004 (3)−0.002 (3)0.000 (3)
C100.066 (4)0.072 (3)0.068 (4)−0.005 (3)−0.006 (3)0.000 (3)
C110.070 (4)0.083 (4)0.077 (4)−0.011 (3)0.000 (3)0.008 (3)
C120.069 (4)0.122 (5)0.071 (4)0.003 (4)−0.003 (4)0.021 (4)
C130.081 (5)0.146 (6)0.067 (4)0.015 (4)−0.006 (4)−0.010 (4)
C140.102 (6)0.108 (5)0.084 (5)−0.004 (4)−0.012 (4)−0.021 (4)
C150.086 (4)0.090 (4)0.077 (4)−0.018 (3)−0.001 (3)0.000 (3)
C160.081 (4)0.059 (3)0.062 (3)−0.008 (3)−0.004 (3)0.002 (3)
C170.086 (5)0.067 (3)0.068 (4)0.006 (3)−0.010 (3)0.001 (3)
C180.075 (5)0.083 (4)0.090 (5)0.003 (3)−0.006 (4)0.012 (4)
C190.075 (5)0.104 (5)0.105 (5)−0.005 (4)−0.012 (4)0.020 (4)
C200.106 (6)0.090 (4)0.090 (5)−0.016 (4)−0.027 (5)−0.004 (4)
C210.086 (5)0.083 (4)0.072 (4)−0.009 (3)−0.010 (4)0.000 (3)
N1—C71.310 (7)C10—C151.410 (7)
N1—C81.374 (6)C11—C121.377 (7)
N1—H10.8600C11—H110.9600
N2—C71.302 (6)C12—C131.342 (8)
N2—C91.391 (6)C12—H120.9600
C1—C21.353 (7)C13—C141.419 (9)
C1—C61.392 (7)C13—H130.9600
C1—C71.462 (7)C14—C151.363 (7)
C2—C31.406 (8)C14—H140.9600
C2—H20.9602C15—H150.9599
C3—C41.378 (8)C16—C171.398 (7)
C3—H30.9600C16—C211.390 (7)
C4—C51.348 (7)C17—C181.377 (7)
C4—H40.9600C17—H170.9602
C5—C61.378 (7)C18—C191.364 (8)
C5—H50.9600C18—H180.9599
C6—H60.9602C19—C201.384 (9)
C8—C91.353 (7)C19—H190.9600
C8—C161.477 (7)C20—C211.380 (8)
C9—C101.474 (7)C20—H200.9601
C10—C111.377 (7)C21—H210.9599
C7—N1—C8107.0 (4)C12—C11—C10119.9 (6)
C7—N1—H1126.5C12—C11—H11121.6
C8—N1—H1126.5C10—C11—H11118.5
C7—N2—C9106.0 (5)C13—C12—C11122.4 (6)
C2—C1—C6119.3 (6)C13—C12—H12117.0
C2—C1—C7120.9 (6)C11—C12—H12120.6
C6—C1—C7119.8 (5)C12—C13—C14118.9 (6)
C1—C2—C3119.5 (6)C12—C13—H13120.6
C1—C2—H2118.3C14—C13—H13120.6
C3—C2—H2122.2C15—C14—C13119.4 (6)
C4—C3—C2121.5 (6)C15—C14—H14118.9
C4—C3—H3119.7C13—C14—H14121.6
C2—C3—H3118.8C14—C15—C10120.9 (6)
C5—C4—C3117.5 (6)C14—C15—H15120.6
C5—C4—H4120.5C10—C15—H15118.5
C3—C4—H4122.0C17—C16—C21118.2 (5)
C4—C5—C6122.5 (6)C17—C16—C8121.7 (5)
C4—C5—H5117.4C21—C16—C8120.1 (5)
C6—C5—H5120.0C18—C17—C16121.0 (5)
C5—C6—C1119.6 (6)C18—C17—H17120.3
C5—C6—H6120.0C16—C17—H17118.7
C1—C6—H6120.4C19—C18—C17120.5 (6)
N1—C7—N2112.5 (6)C19—C18—H18119.5
N1—C7—C1122.4 (5)C17—C18—H18120.0
N2—C7—C1125.0 (6)C18—C19—C20119.1 (6)
C9—C8—N1107.0 (5)C18—C19—H19120.6
C9—C8—C16134.8 (6)C20—C19—H19120.4
N1—C8—C16118.1 (5)C21—C20—C19121.4 (6)
C8—C9—N2107.5 (5)C21—C20—H20119.9
C8—C9—C10133.5 (6)C19—C20—H20118.7
N2—C9—C10119.0 (5)C20—C21—C16119.8 (6)
C11—C10—C15118.5 (5)C20—C21—H21121.3
C11—C10—C9123.1 (5)C16—C21—H21118.9
C15—C10—C9118.4 (5)
C6—C1—C2—C3−1.4 (9)C8—C9—C10—C1138.5 (8)
C7—C1—C2—C3178.7 (6)N2—C9—C10—C11−139.1 (5)
C1—C2—C3—C42.7 (10)C8—C9—C10—C15−144.2 (6)
C2—C3—C4—C5−2.6 (10)N2—C9—C10—C1538.2 (7)
C3—C4—C5—C61.3 (9)C15—C10—C11—C121.4 (9)
C4—C5—C6—C1−0.1 (9)C9—C10—C11—C12178.7 (5)
C2—C1—C6—C50.1 (8)C10—C11—C12—C13−0.5 (10)
C7—C1—C6—C5180.0 (5)C11—C12—C13—C140.0 (10)
C8—N1—C7—N2−1.1 (6)C12—C13—C14—C15−0.3 (10)
C8—N1—C7—C1179.4 (5)C13—C14—C15—C101.2 (10)
C9—N2—C7—N11.0 (6)C11—C10—C15—C14−1.8 (9)
C9—N2—C7—C1−179.5 (5)C9—C10—C15—C14−179.2 (6)
C2—C1—C7—N120.7 (8)C9—C8—C16—C1724.5 (9)
C6—C1—C7—N1−159.2 (5)N1—C8—C16—C17−153.3 (5)
C2—C1—C7—N2−158.7 (6)C9—C8—C16—C21−157.2 (5)
C6—C1—C7—N221.4 (8)N1—C8—C16—C2125.0 (7)
C7—N1—C8—C90.7 (5)C21—C16—C17—C180.5 (8)
C7—N1—C8—C16179.1 (4)C8—C16—C17—C18178.8 (4)
N1—C8—C9—N2−0.1 (5)C16—C17—C18—C19−0.3 (8)
C16—C8—C9—N2−178.1 (5)C17—C18—C19—C20−0.9 (9)
N1—C8—C9—C10−177.9 (5)C18—C19—C20—C212.0 (10)
C16—C8—C9—C104.1 (10)C19—C20—C21—C16−1.9 (9)
C7—N2—C9—C8−0.5 (5)C17—C16—C21—C200.6 (8)
C7—N2—C9—C10177.6 (4)C8—C16—C21—C20−177.7 (5)
  4 in total

1.  Red, orange and yellow crystals of 4,5-bis(4-methoxyphenyl)-2-(3-nitrophenyl)-1H-imidazole

Authors: 
Journal:  Acta Crystallogr C       Date:  2000-07       Impact factor: 1.172

2.  The Cambridge Structural Database: a quarter of a million crystal structures and rising.

Authors:  Frank H Allen
Journal:  Acta Crystallogr B       Date:  2002-05-29

3.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

4.  Lophine derivatives as versatile analytical tools.

Authors:  Kenichiro Nakashima
Journal:  Biomed Chromatogr       Date:  2003 Mar-Apr       Impact factor: 1.902

  4 in total
  5 in total

1.  Crystal structure of 1-[2-(4-chloro-phen-yl)-4,5-diphenyl-1H-imidazol-1-yl]propan-2-ol.

Authors:  Shaaban K Mohamed; Adel A Marzouk; Mustafa R Albayati; Antar A Abdelhamid; Jim Simpson
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2017-01-01

2.  Crystal structure of 1-[2-(4-nitro-phen-yl)-4,5-diphenyl-1H-imidazol-1-yl]propan-2-ol.

Authors:  Jim Simpson; Shaaban K Mohamed; Adel A Marzouk; Antar A Abdelhamid; Mustafa R Albayati
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2017-08-30

3.  Organic-inorganic hybrid sol-gel materials doped with a fluorescent triarylimidazole derivative.

Authors:  Rui P C L Sousa; Rita B Figueira; Bárbara R Gomes; Susana P G Costa; Miguel Azenha; Rui F P Pereira; M Manuela Raposo
Journal:  RSC Adv       Date:  2021-07-15       Impact factor: 4.036

4.  2-(4-Meth-oxy-phen-yl)-1-pentyl-4,5-di-phenyl-1H-imidazole.

Authors:  Jim Simpson; Shaaban K Mohamed; Adel A Marzouk; Avtandil H Talybov; Antar A Abdelhamid
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-12-05

5.  4-(4,5-Diphenyl-1H-imidazol-2-yl)-N,N-di-methyl-aniline.

Authors:  M Prabhuswamy; S Viveka; S Madan Kumar; G K Nagaraja; N K Lokanath
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-05-08
  5 in total

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