| Literature DB >> 23476353 |
T Balakrishnan1, K Ramamurthi, J Jeyakanthan, S Thamotharan.
Abstract
In the title coordination polymer, {[Li(C2H5NO2)2(H2O)]Br} n , the Li(+) cation is coordinated by three carboxyl-ate O atoms of zwitterionic glycine mol-ecules and by a water mol-ecule, forming a distorted tetra-hedral geometry. One of the two glycine mol-ecules bridges neighbouring complexes, forming an infinite chain parallel to the c axis. Polymeric chains are further linked by extensive hydrogen bonds involving the Br(-) anions and glycine and water mol-ecules, producing a three-dimensional network.Entities:
Year: 2012 PMID: 23476353 PMCID: PMC3588392 DOI: 10.1107/S1600536812050660
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Li(C2H5NO2)2(H2O)]Br | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 7161 reflections |
| θ = 2.3–26.0° | |
| µ = 4.28 mm−1 | |
| β = 118.138 (7)° | Rod, colourless |
| 0.61 × 0.30 × 0.30 mm | |
| STOE IPDS diffractometer | 1847 independent reflections |
| Radiation source: fine-focus sealed tube | 1520 reflections with |
| Graphite monochromator | |
| phi rotation scans | θmax = 26.0°, θmin = 2.3° |
| Absorption correction: multi-scan ( | |
| 7515 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H atoms treated by a mixture of independent and constrained refinement | |
| (Δ/σ)max = 0.001 | |
| 1847 reflections | Δρmax = 0.55 e Å−3 |
| 151 parameters | Δρmin = −0.26 e Å−3 |
| 2 restraints | Extinction correction: |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.0097 (8) |
| Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
| O1 | 0.4191 (2) | 0.89555 (8) | 0.8413 (2) | 0.0210 (3) | |
| O2 | 0.1743 (3) | 0.80884 (9) | 0.7211 (2) | 0.0250 (4) | |
| O1W | 0.0182 (3) | 0.65924 (9) | 0.4468 (2) | 0.0218 (4) | |
| H1 | 0.075 (4) | 0.6666 (14) | 0.385 (4) | 0.027 (7)* | |
| H2 | 0.084 (4) | 0.6254 (14) | 0.522 (4) | 0.043 (9)* | |
| O3 | −0.1525 (3) | 0.81668 (8) | 0.1971 (2) | 0.0270 (4) | |
| O4 | −0.2535 (2) | 0.80493 (8) | 0.4080 (2) | 0.0217 (3) | |
| N1 | 0.5965 (3) | 0.84975 (12) | 0.6419 (3) | 0.0205 (4) | |
| H1A | 0.643 (4) | 0.8360 (15) | 0.559 (4) | 0.031 (7)* | |
| H1B | 0.702 (5) | 0.8395 (17) | 0.755 (5) | 0.038 (8)* | |
| H1C | 0.580 (5) | 0.899 (2) | 0.631 (4) | 0.047 (9)* | |
| N2 | −0.2448 (3) | 0.96593 (11) | 0.1353 (3) | 0.0174 (4) | |
| H2A | −0.129 (5) | 0.9644 (14) | 0.156 (4) | 0.025 (7)* | |
| H2B | −0.323 (4) | 0.9429 (15) | 0.027 (4) | 0.029 (7)* | |
| H2C | −0.284 (4) | 1.0168 (17) | 0.126 (4) | 0.035 (8)* | |
| C1 | 0.3295 (3) | 0.84132 (11) | 0.7358 (3) | 0.0153 (4) | |
| C2 | 0.4092 (3) | 0.81116 (11) | 0.6103 (3) | 0.0174 (4) | |
| H2E | 0.4342 | 0.7553 | 0.6307 | 0.021* | |
| H2F | 0.3062 | 0.8189 | 0.4812 | 0.021* | |
| C3 | −0.2198 (3) | 0.84265 (12) | 0.2952 (3) | 0.0166 (4) | |
| C4 | −0.2679 (4) | 0.92762 (12) | 0.2840 (3) | 0.0204 (5) | |
| H4A | −0.4078 | 0.9343 | 0.2624 | 0.025* | |
| H4B | −0.1772 | 0.9523 | 0.4025 | 0.025* | |
| Li1 | −0.0369 (6) | 0.7388 (2) | 0.5754 (5) | 0.0196 (8) | |
| Br1 | 0.24155 (3) | 0.968012 (12) | 0.27597 (3) | 0.02208 (9) |
| O1 | 0.0197 (8) | 0.0202 (8) | 0.0247 (9) | −0.0040 (6) | 0.0118 (7) | −0.0074 (6) |
| O2 | 0.0244 (9) | 0.0289 (8) | 0.0290 (10) | −0.0120 (7) | 0.0186 (8) | −0.0097 (7) |
| O1W | 0.0316 (9) | 0.0191 (8) | 0.0248 (10) | 0.0070 (7) | 0.0217 (9) | 0.0058 (7) |
| O3 | 0.0410 (10) | 0.0198 (7) | 0.0349 (10) | 0.0062 (7) | 0.0300 (9) | 0.0011 (7) |
| O4 | 0.0254 (8) | 0.0231 (7) | 0.0223 (9) | 0.0046 (6) | 0.0159 (8) | 0.0045 (6) |
| N1 | 0.0191 (11) | 0.0237 (10) | 0.0236 (12) | −0.0025 (8) | 0.0142 (11) | −0.0050 (8) |
| N2 | 0.0149 (9) | 0.0166 (9) | 0.0213 (11) | 0.0007 (8) | 0.0089 (9) | −0.0015 (8) |
| C1 | 0.0165 (10) | 0.0150 (9) | 0.0145 (11) | 0.0024 (8) | 0.0073 (10) | 0.0018 (8) |
| C2 | 0.0191 (11) | 0.0168 (9) | 0.0201 (12) | −0.0012 (8) | 0.0123 (10) | −0.0027 (8) |
| C3 | 0.0128 (10) | 0.0204 (10) | 0.0157 (12) | 0.0008 (8) | 0.0061 (10) | −0.0019 (8) |
| C4 | 0.0253 (12) | 0.0207 (11) | 0.0211 (12) | 0.0008 (9) | 0.0158 (11) | −0.0023 (9) |
| Li1 | 0.023 (2) | 0.0190 (16) | 0.020 (2) | −0.0040 (14) | 0.0125 (18) | −0.0022 (14) |
| Br1 | 0.01662 (13) | 0.02188 (12) | 0.02587 (15) | −0.00224 (9) | 0.00846 (10) | −0.00292 (9) |
| O1—C1 | 1.247 (3) | N1—H1C | 0.86 (3) |
| O2—C1 | 1.253 (3) | N2—C4 | 1.480 (3) |
| O2—Li1 | 1.915 (4) | N2—H2A | 0.81 (3) |
| O1W—Li1 | 1.908 (4) | N2—H2B | 0.90 (3) |
| O1W—H1 | 0.816 (17) | N2—H2C | 0.93 (3) |
| O1W—H2 | 0.829 (18) | C1—C2 | 1.518 (3) |
| O3—C3 | 1.228 (3) | C2—H2E | 0.9900 |
| O3—Li1i | 1.880 (4) | C2—H2F | 0.9900 |
| O4—C3 | 1.261 (3) | C3—C4 | 1.516 (3) |
| O4—Li1 | 1.944 (4) | C4—H4A | 0.9900 |
| N1—C2 | 1.472 (3) | C4—H4B | 0.9900 |
| N1—H1A | 0.94 (3) | Li1—O3ii | 1.880 (4) |
| N1—H1B | 0.92 (4) | ||
| C1—O2—Li1 | 144.09 (18) | O3—C3—O4 | 126.0 (2) |
| Li1—O1W—H1 | 123.4 (18) | O3—C3—C4 | 118.73 (18) |
| Li1—O1W—H2 | 108 (2) | O4—C3—C4 | 115.30 (17) |
| H1—O1W—H2 | 106 (3) | O3—C3—Li1 | 96.65 (15) |
| C3—O3—Li1i | 169.50 (19) | C4—C3—Li1 | 134.84 (17) |
| C3—O4—Li1 | 116.16 (16) | N2—C4—C3 | 111.84 (17) |
| C2—N1—H1A | 114.4 (17) | N2—C4—H4A | 109.2 |
| C2—N1—H1B | 113.0 (18) | C3—C4—H4A | 109.2 |
| H1A—N1—H1B | 105 (3) | N2—C4—H4B | 109.2 |
| C2—N1—H1C | 111 (2) | C3—C4—H4B | 109.2 |
| H1A—N1—H1C | 105 (3) | H4A—C4—H4B | 107.9 |
| H1B—N1—H1C | 108 (3) | O3ii—Li1—O1W | 101.73 (17) |
| C4—N2—H2A | 110 (2) | O3ii—Li1—O2 | 116.6 (2) |
| C4—N2—H2B | 110.4 (17) | O1W—Li1—O2 | 118.6 (2) |
| H2A—N2—H2B | 109 (3) | O3ii—Li1—O4 | 103.87 (18) |
| C4—N2—H2C | 109.9 (18) | O1W—Li1—O4 | 111.3 (2) |
| H2A—N2—H2C | 109 (2) | O2—Li1—O4 | 103.93 (17) |
| H2B—N2—H2C | 108 (3) | O3ii—Li1—C3 | 128.00 (19) |
| O1—C1—O2 | 125.69 (19) | O1W—Li1—C3 | 99.35 (16) |
| O1—C1—C2 | 118.81 (18) | O2—Li1—C3 | 92.83 (15) |
| O2—C1—C2 | 115.49 (18) | O4—Li1—C3 | 24.36 (7) |
| N1—C2—C1 | 112.13 (17) | O3ii—Li1—H2 | 89.3 (7) |
| N1—C2—H2E | 109.2 | O1W—Li1—H2 | 20.0 (6) |
| C1—C2—H2E | 109.2 | O2—Li1—H2 | 112.4 (8) |
| N1—C2—H2F | 109.2 | O4—Li1—H2 | 130.3 (7) |
| C1—C2—H2F | 109.2 | C3—Li1—H2 | 119.3 (6) |
| H2E—C2—H2F | 107.9 | ||
| Li1—O2—C1—O1 | 168.2 (3) | C1—O2—Li1—C3 | −72.0 (3) |
| Li1—O2—C1—C2 | −10.9 (4) | C3—O4—Li1—O3ii | −172.65 (17) |
| O1—C1—C2—N1 | 3.5 (3) | C3—O4—Li1—O1W | −63.9 (2) |
| O2—C1—C2—N1 | −177.3 (2) | C3—O4—Li1—O2 | 64.9 (2) |
| Li1i—O3—C3—O4 | −14.7 (13) | O3—C3—Li1—O3ii | −133.0 (2) |
| Li1i—O3—C3—C4 | 165.1 (10) | O4—C3—Li1—O3ii | 9.1 (2) |
| Li1i—O3—C3—Li1 | 14.2 (11) | C4—C3—Li1—O3ii | 84.0 (3) |
| Li1—O4—C3—O3 | 49.0 (3) | O3—C3—Li1—O1W | −20.0 (2) |
| Li1—O4—C3—C4 | −130.8 (2) | O4—C3—Li1—O1W | 122.0 (2) |
| O3—C3—C4—N2 | 6.3 (3) | C4—C3—Li1—O1W | −163.0 (2) |
| O4—C3—C4—N2 | −173.94 (19) | O3—C3—Li1—O2 | 99.58 (17) |
| Li1—C3—C4—N2 | 143.3 (2) | O4—C3—Li1—O2 | −118.4 (2) |
| C1—O2—Li1—O3ii | 152.4 (3) | C4—C3—Li1—O2 | −43.4 (3) |
| C1—O2—Li1—O1W | 30.3 (4) | O3—C3—Li1—O4 | −142.0 (3) |
| C1—O2—Li1—O4 | −93.9 (3) | C4—C3—Li1—O4 | 75.0 (3) |
| H··· | ||||
| N1—H1 | 0.94 (3) | 1.83 (3) | 2.774 (2) | 176 (3) |
| N1—H1 | 0.92 (4) | 2.15 (4) | 2.989 (3) | 151 (2) |
| N1—H1 | 0.86 (3) | 2.61 (3) | 3.353 (2) | 146 (3) |
| N2—H2 | 0.81 (3) | 2.48 (3) | 3.283 (2) | 170 (3) |
| N2—H2 | 0.90 (3) | 2.00 (3) | 2.833 (3) | 153 (2) |
| N2—H2 | 0.93 (3) | 1.92 (3) | 2.797 (2) | 157 (3) |
| O1 | 0.82 (2) | 1.88 (2) | 2.692 (2) | 172 (3) |
| O1 | 0.83 (2) | 2.48 (2) | 3.2923 (17) | 169 (3) |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| N1—H1 | 0.94 (3) | 1.83 (3) | 2.774 (2) | 176 (3) |
| N1—H1 | 0.92 (4) | 2.15 (4) | 2.989 (3) | 151 (2) |
| N1—H1 | 0.86 (3) | 2.61 (3) | 3.353 (2) | 146 (3) |
| N2—H2 | 0.81 (3) | 2.48 (3) | 3.283 (2) | 170 (3) |
| N2—H2 | 0.90 (3) | 2.00 (3) | 2.833 (3) | 153 (2) |
| N2—H2 | 0.93 (3) | 1.92 (3) | 2.797 (2) | 157 (3) |
| O1 | 0.82 (2) | 1.88 (2) | 2.692 (2) | 172 (3) |
| O1 | 0.83 (2) | 2.48 (2) | 3.2923 (17) | 169 (3) |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) ; (vi) ; (vii) .