Literature DB >> 8312483

Ligand binding to heme proteins: III. FTIR studies of His-E7 and Val-E11 mutants of carbonmonoxymyoglobin.

D P Braunstein1, K Chu, K D Egeberg, H Frauenfelder, J R Mourant, G U Nienhaus, P Ormos, S G Sligar, B A Springer, R D Young.   

Abstract

Fouier-transform infrared (FTIR) difference spectra of several His-E7 and Val-E11 mutants of sperm whale carbonmonoxymyoglobin were obtained by photodissociation at cryogenic temperatures. The IR absorption of the CO ligand shows characteristic features for each of the mutants, both in the ligand-bound (A) state and in the photodissociated (B) state. For most of the mutants, a single A substate band is observed, which points to the crucial role of the His-E7 residue in determining the A substrate spectrum of the bound CO in the native structure. The fact that some of the mutants show more than one stretch band of the bound CO indicates that the appearance of multiple A substates is not exclusively connected to the presence of His-E7. In all but one mutant, multiple stretch bands of the CO in the photodissociated state are observed; these B substates are thought to arise from discrete positions and/or orientations of the photodissociated ligand in the heme pocket. The red shifts of the B bands with respect to the free-gas frequency indicate weak binding in the heme pocket. The observation of similar red shifts in microperoxidase (MP-8), where there is no residue on the distal side, suggests that the photodissociated ligand is still associated with the heme iron. Photoselection experiments were performed to determine the orientation of the bound ligand with respect to the heme normal by photolyzing small fractions of the sample with linearly polarized light at 540 nm. The resulting linear dichroism in the CO stretch spectrum yielded angles alpha > 20 degrees between the CO molecular axis and the heme normal for all of the mutants. We conclude that the off-axis position of the CO ligand in the native structure does not arise from steric constraints imposed by the distal histidine. There is no clear correlation between the size of the distal residue and the alpha of the CO ligand.

Entities:  

Mesh:

Substances:

Year:  1993        PMID: 8312483      PMCID: PMC1225985          DOI: 10.1016/S0006-3495(93)81310-9

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  42 in total

Review 1.  Myoglobin and haemoglobin: role of distal residues in reactions with haem ligands.

Authors:  M F Perutz
Journal:  Trends Biochem Sci       Date:  1989-02       Impact factor: 13.807

2.  Resonance raman investigations of site-directed mutants of myoglobin: effects of distal histidine replacement.

Authors:  D Morikis; P M Champion; B A Springer; S G Sligar
Journal:  Biochemistry       Date:  1989-05-30       Impact factor: 3.162

3.  Orientation of carbon monoxide and structure-function relationship in carbonmonoxymyoglobin.

Authors:  P Ormos; D Braunstein; H Frauenfelder; M K Hong; S L Lin; T B Sauke; R D Young
Journal:  Proc Natl Acad Sci U S A       Date:  1988-11       Impact factor: 11.205

4.  5 K extended X-ray absorption fine structure and 40 K 10-s resolved extended X-ray absorption fine structure studies of photolyzed carboxymyoglobin.

Authors:  T Y Teng; H W Huang; G A Olah
Journal:  Biochemistry       Date:  1987-12-15       Impact factor: 3.162

5.  Kinetic, structural, and spectroscopic identification of geminate states of myoglobin: a ligand binding site on the reaction pathway.

Authors:  L Powers; B Chance; M Chance; B Campbell; J Friedman; S Khalid; C Kumar; A Naqui; K S Reddy; Y Zhou
Journal:  Biochemistry       Date:  1987-07-28       Impact factor: 3.162

6.  The role of the distal histidine in myoglobin and haemoglobin.

Authors:  J S Olson; A J Mathews; R J Rohlfs; B A Springer; K D Egeberg; S G Sligar; J Tame; J P Renaud; K Nagai
Journal:  Nature       Date:  1988-11-17       Impact factor: 49.962

7.  Two types of conformers with distinct Fe-C-O configuration in the ferrous CO complex of horseradish peroxidase. Resonance Raman and infarared spectroscopic studies with native and deuteroheme-substituted enzymes.

Authors:  T Uno; Y Nishimura; M Tsuboi; R Makino; T Iizuka; Y Ishimura
Journal:  J Biol Chem       Date:  1987-04-05       Impact factor: 5.157

8.  Ligand binding to synthetic mutant myoglobin (His-E7----Gly): role of the distal histidine.

Authors:  D Braunstein; A Ansari; J Berendzen; B R Cowen; K D Egeberg; H Frauenfelder; M K Hong; P Ormos; T B Sauke; R Scholl
Journal:  Proc Natl Acad Sci U S A       Date:  1988-11       Impact factor: 11.205

9.  Discrimination between oxygen and carbon monoxide and inhibition of autooxidation by myoglobin. Site-directed mutagenesis of the distal histidine.

Authors:  B A Springer; K D Egeberg; S G Sligar; R J Rohlfs; A J Mathews; J S Olson
Journal:  J Biol Chem       Date:  1989-02-25       Impact factor: 5.157

10.  Iron-carbonyl bond geometries of carboxymyoglobin and carboxyhemoglobin in solution determined by picosecond time-resolved infrared spectroscopy.

Authors:  J N Moore; P A Hansen; R M Hochstrasser
Journal:  Proc Natl Acad Sci U S A       Date:  1988-07       Impact factor: 11.205

View more
  23 in total

1.  Proton electron nuclear double resonance from nitrosyl horse heart myoglobin: the role of His-E7 and Val-E11.

Authors:  M Flores; E Wajnberg; G Bemski
Journal:  Biophys J       Date:  2000-04       Impact factor: 4.033

2.  The effect of ligand dynamics on heme electronic transition band III in myoglobin.

Authors:  Karin Nienhaus; Don C Lamb; Pengchi Deng; G Ulrich Nienhaus
Journal:  Biophys J       Date:  2002-02       Impact factor: 4.033

3.  Influence of the heme pocket conformation on the structure and vibrations of the Fe-CO bond in myoglobin: a QM/MM density functional study.

Authors:  C Rovira; B Schulze; M Eichinger; J D Evanseck; M Parrinello
Journal:  Biophys J       Date:  2001-07       Impact factor: 4.033

4.  Transient ligand docking sites in Cerebratulus lacteus mini-hemoglobin.

Authors:  Pengchi Deng; Karin Nienhaus; Pasquale Palladino; John S Olson; George Blouin; Luc Moens; Sylvia Dewilde; Eva Geuens; G Ulrich Nienhaus
Journal:  Gene       Date:  2007-04-29       Impact factor: 3.688

5.  Ligand migration and binding in the dimeric hemoglobin of Scapharca inaequivalvis.

Authors:  Karin Nienhaus; James E Knapp; Pasquale Palladino; William E Royer; G Ulrich Nienhaus
Journal:  Biochemistry       Date:  2007-11-15       Impact factor: 3.162

6.  Protein fluctuations are sensed by stimulated infrared echoes of the vibrations of carbon monoxide and azide probes.

Authors:  M Lim; P Hamm; R M Hochstrasser
Journal:  Proc Natl Acad Sci U S A       Date:  1998-12-22       Impact factor: 11.205

7.  Dynamic properties of monomeric insect erythrocruorin III from Chironomus thummi-thummi: relationships between structural flexibility and functional complexity.

Authors:  E E Di Iorio; I Tavernelli; W Yu
Journal:  Biophys J       Date:  1997-11       Impact factor: 4.033

8.  Ligand binding to heme proteins. VI. Interconversion of taxonomic substates in carbonmonoxymyoglobin.

Authors:  J B Johnson; D C Lamb; H Frauenfelder; J D Müller; B McMahon; G U Nienhaus; R D Young
Journal:  Biophys J       Date:  1996-09       Impact factor: 4.033

9.  An engineered heme-copper center in myoglobin: CO migration and binding.

Authors:  Karin Nienhaus; John S Olson; G Ulrich Nienhaus
Journal:  Biochim Biophys Acta       Date:  2013-02-28

10.  Ligand and substrate migration in human indoleamine 2,3-dioxygenase.

Authors:  Elena Nickel; Karin Nienhaus; Changyuan Lu; Syun-Ru Yeh; G Ulrich Nienhaus
Journal:  J Biol Chem       Date:  2009-09-20       Impact factor: 5.157

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.