Literature DB >> 23456257

Epigenetic methylations and their connections with metabolism.

Fulvio Chiacchiera1, Andrea Piunti, Diego Pasini.   

Abstract

Metabolic pathways play fundamental roles in several processes that regulate cell physiology and adaptation to environmental changes. Altered metabolic pathways predispose to several different pathologies ranging from diabetes to cancer. Specific transcriptional programs tightly regulate the enzymes involved in cell metabolism and dictate cell fate regulating the differentiation into specialized cell types that contribute to metabolic adaptation in higher organisms. For these reasons, it is of extreme importance to identify signaling pathways and transcription factors that positively and negatively regulate metabolism. Genomic organization allows a plethora of different strategies to regulate transcription. Importantly, large evidence suggests that the quality of diet and the caloric regimen can influence the epigenetic state of our genome and that certain metabolic pathways are also epigenetically controlled reveling a tight crosstalk between metabolism and epigenomes. Here we focus our attention on methylation-based epigenetic reactions, on how different metabolic pathways control these activities, and how these can influence metabolism. Altogether, the recent discoveries linking these apparent distant areas reveal that an exciting field of research is emerging.

Entities:  

Mesh:

Substances:

Year:  2013        PMID: 23456257     DOI: 10.1007/s00018-013-1293-5

Source DB:  PubMed          Journal:  Cell Mol Life Sci        ISSN: 1420-682X            Impact factor:   9.261


  148 in total

1.  DNA-binding factors shape the mouse methylome at distal regulatory regions.

Authors:  Michael B Stadler; Rabih Murr; Lukas Burger; Robert Ivanek; Florian Lienert; Anne Schöler; Erik van Nimwegen; Christiane Wirbelauer; Edward J Oakeley; Dimos Gaidatzis; Vijay K Tiwari; Dirk Schübeler
Journal:  Nature       Date:  2011-12-14       Impact factor: 49.962

2.  JmjC-domain-containing proteins and histone demethylation.

Authors:  Robert J Klose; Eric M Kallin; Yi Zhang
Journal:  Nat Rev Genet       Date:  2006-09       Impact factor: 53.242

Review 3.  Transcriptional coregulators in the control of energy homeostasis.

Authors:  Jérôme N Feige; Johan Auwerx
Journal:  Trends Cell Biol       Date:  2007-05-01       Impact factor: 20.808

Review 4.  Determinants and dynamics of genome accessibility.

Authors:  Oliver Bell; Vijay K Tiwari; Nicolas H Thomä; Dirk Schübeler
Journal:  Nat Rev Genet       Date:  2011-07-12       Impact factor: 53.242

5.  The von Hippel-Lindau tumor suppressor protein regulates gene expression and tumor growth through histone demethylase JARID1C.

Authors:  X Niu; T Zhang; L Liao; L Zhou; D J Lindner; M Zhou; B Rini; Q Yan; H Yang
Journal:  Oncogene       Date:  2011-07-04       Impact factor: 9.867

6.  Ring1-mediated ubiquitination of H2A restrains poised RNA polymerase II at bivalent genes in mouse ES cells.

Authors:  Julie K Stock; Sara Giadrossi; Miguel Casanova; Emily Brookes; Miguel Vidal; Haruhiko Koseki; Neil Brockdorff; Amanda G Fisher; Ana Pombo
Journal:  Nat Cell Biol       Date:  2007-11-25       Impact factor: 28.824

7.  Jarid2/Jumonji coordinates control of PRC2 enzymatic activity and target gene occupancy in pluripotent cells.

Authors:  Jamy C Peng; Anton Valouev; Tomek Swigut; Junmei Zhang; Yingming Zhao; Arend Sidow; Joanna Wysocka
Journal:  Cell       Date:  2009-12-24       Impact factor: 41.582

8.  Epigenetic transcriptional repression of cellular genes by a viral SET protein.

Authors:  Shiraz Mujtaba; Karishma L Manzur; James R Gurnon; Ming Kang; James L Van Etten; Ming-Ming Zhou
Journal:  Nat Cell Biol       Date:  2008-09       Impact factor: 28.824

Review 9.  TET family proteins and their role in stem cell differentiation and transformation.

Authors:  Luisa Cimmino; Omar Abdel-Wahab; Ross L Levine; Iannis Aifantis
Journal:  Cell Stem Cell       Date:  2011-09-02       Impact factor: 24.633

10.  Oncometabolite 2-hydroxyglutarate is a competitive inhibitor of α-ketoglutarate-dependent dioxygenases.

Authors:  Wei Xu; Hui Yang; Ying Liu; Ying Yang; Ping Wang; Se-Hee Kim; Shinsuke Ito; Chen Yang; Pu Wang; Meng-Tao Xiao; Li-xia Liu; Wen-qing Jiang; Jing Liu; Jin-ye Zhang; Bin Wang; Stephen Frye; Yi Zhang; Yan-hui Xu; Qun-ying Lei; Kun-Liang Guan; Shi-min Zhao; Yue Xiong
Journal:  Cancer Cell       Date:  2011-01-18       Impact factor: 38.585

View more
  13 in total

Review 1.  Mitochondrial health, the epigenome and healthspan.

Authors:  Miguel A Aon; Sonia Cortassa; Magdalena Juhaszova; Steven J Sollott
Journal:  Clin Sci (Lond)       Date:  2016-08-01       Impact factor: 6.124

Review 2.  Mitochondrial Complex II: At the Crossroads.

Authors:  Ayenachew Bezawork-Geleta; Jakub Rohlena; Lanfeng Dong; Karel Pacak; Jiri Neuzil
Journal:  Trends Biochem Sci       Date:  2017-02-07       Impact factor: 13.807

Review 3.  Macro domains as metabolite sensors on chromatin.

Authors:  Melanija Posavec; Gyula Timinszky; Marcus Buschbeck
Journal:  Cell Mol Life Sci       Date:  2013-03-03       Impact factor: 9.261

4.  PRC2 preserves intestinal progenitors and restricts secretory lineage commitment.

Authors:  Fulvio Chiacchiera; Alessandra Rossi; SriGanesh Jammula; Marika Zanotti; Diego Pasini
Journal:  EMBO J       Date:  2016-09-01       Impact factor: 11.598

Review 5.  A Tox21 Approach to Altered Epigenetic Landscapes: Assessing Epigenetic Toxicity Pathways Leading to Altered Gene Expression and Oncogenic Transformation In Vitro.

Authors:  Craig L Parfett; Daniel Desaulniers
Journal:  Int J Mol Sci       Date:  2017-06-01       Impact factor: 5.923

6.  The role of DNA methylation during anoxia tolerance in a freshwater turtle (Trachemys scripta elegans).

Authors:  Sanoji Wijenayake; Kenneth B Storey
Journal:  J Comp Physiol B       Date:  2016-02-03       Impact factor: 2.200

7.  Apolipoprotein E4 and Insulin Resistance Interact to Impair Cognition and Alter the Epigenome and Metabolome.

Authors:  Lance A Johnson; Eileen Ruth S Torres; Soren Impey; Jan F Stevens; Jacob Raber
Journal:  Sci Rep       Date:  2017-03-08       Impact factor: 4.379

8.  Evaluation of IGFBP-7 DNA methylation changes and serum protein variation in Swedish subjects with and without type 2 diabetes.

Authors:  Harvest F Gu; Tianwei Gu; Agneta Hilding; Yiming Zhu; Lars Kärvestedt; Claes-Göran Ostenson; Maode Lai; Masahiko Kutsukake; Jan Frystyk; Kazuhiro Tamura; Kerstin Brismar
Journal:  Clin Epigenetics       Date:  2013-11-04       Impact factor: 6.551

Review 9.  Human genetics of tuberculosis: a long and winding road.

Authors:  Laurent Abel; Jamila El-Baghdadi; Ahmed Aziz Bousfiha; Jean-Laurent Casanova; Erwin Schurr
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2014-05-12       Impact factor: 6.237

10.  Thermal manipulation of the chicken embryo triggers differential gene expression in response to a later heat challenge.

Authors:  Thomas Loyau; Christelle Hennequet-Antier; Vincent Coustham; Cécile Berri; Marie Leduc; Sabine Crochet; Mélanie Sannier; Michel Jacques Duclos; Sandrine Mignon-Grasteau; Sophie Tesseraud; Aurélien Brionne; Sonia Métayer-Coustard; Marco Moroldo; Jérôme Lecardonnel; Patrice Martin; Sandrine Lagarrigue; Shlomo Yahav; Anne Collin
Journal:  BMC Genomics       Date:  2016-05-04       Impact factor: 3.969

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.