Literature DB >> 23442172

The virtual brain integrates computational modeling and multimodal neuroimaging.

Petra Ritter1, Michael Schirner, Anthony R McIntosh, Viktor K Jirsa.   

Abstract

Brain function is thought to emerge from the interactions among neuronal populations. Apart from traditional efforts to reproduce brain dynamics from the micro- to macroscopic scales, complementary approaches develop phenomenological models of lower complexity. Such macroscopic models typically generate only a few selected-ideally functionally relevant-aspects of the brain dynamics. Importantly, they often allow an understanding of the underlying mechanisms beyond computational reproduction. Adding detail to these models will widen their ability to reproduce a broader range of dynamic features of the brain. For instance, such models allow for the exploration of consequences of focal and distributed pathological changes in the system, enabling us to identify and develop approaches to counteract those unfavorable processes. Toward this end, The Virtual Brain (TVB) ( www.thevirtualbrain.org ), a neuroinformatics platform with a brain simulator that incorporates a range of neuronal models and dynamics at its core, has been developed. This integrated framework allows the model-based simulation, analysis, and inference of neurophysiological mechanisms over several brain scales that underlie the generation of macroscopic neuroimaging signals. In this article, we describe how TVB works, and we present the first proof of concept.

Entities:  

Mesh:

Year:  2013        PMID: 23442172      PMCID: PMC3696923          DOI: 10.1089/brain.2012.0120

Source DB:  PubMed          Journal:  Brain Connect        ISSN: 2158-0014


  94 in total

1.  An integrative MEG-fMRI study of the primary somatosensory cortex using cross-modal correspondence analysis.

Authors:  Matthias Schulz; Wilkin Chau; Simon J Graham; Anthony R McIntosh; Bernhard Ross; Ryouhei Ishii; Christo Pantev
Journal:  Neuroimage       Date:  2004-05       Impact factor: 6.556

2.  A database of computational models of a half-center oscillator for analyzing how neuronal parameters influence network activity.

Authors:  Anca Doloc-Mihu; Ronald L Calabrese
Journal:  J Biol Phys       Date:  2011-02-12       Impact factor: 1.365

3.  Connecting mean field models of neural activity to EEG and fMRI data.

Authors:  Ingo Bojak; Thom F Oostendorp; Andrew T Reid; Rolf Kötter
Journal:  Brain Topogr       Date:  2010-04-04       Impact factor: 3.020

4.  Electrophysiological signatures of resting state networks in the human brain.

Authors:  D Mantini; M G Perrucci; C Del Gratta; G L Romani; M Corbetta
Journal:  Proc Natl Acad Sci U S A       Date:  2007-08-01       Impact factor: 11.205

Review 5.  Simultaneous EEG-fMRI.

Authors:  Petra Ritter; Arno Villringer
Journal:  Neurosci Biobehav Rev       Date:  2006-08-15       Impact factor: 8.989

6.  fMRI-EEG integrated cortical source imaging by use of time-variant spatial constraints.

Authors:  Zhongming Liu; Bin He
Journal:  Neuroimage       Date:  2007-10-12       Impact factor: 6.556

7.  Parameter space analysis suggests multi-site plasticity contributes to motor pattern initiation in Tritonia.

Authors:  Robert J Calin-Jageman; Mark J Tunstall; Brett D Mensh; Paul S Katz; William N Frost
Journal:  J Neurophysiol       Date:  2007-07-25       Impact factor: 2.714

8.  Excitatory and inhibitory interactions in localized populations of model neurons.

Authors:  H R Wilson; J D Cowan
Journal:  Biophys J       Date:  1972-01       Impact factor: 4.033

Review 9.  Searching for a baseline: functional imaging and the resting human brain.

Authors:  D A Gusnard; M E Raichle; M E Raichle
Journal:  Nat Rev Neurosci       Date:  2001-10       Impact factor: 34.870

10.  Channel density distributions explain spiking variability in the globus pallidus: a combined physiology and computer simulation database approach.

Authors:  Cengiz Günay; Jeremy R Edgerton; Dieter Jaeger
Journal:  J Neurosci       Date:  2008-07-23       Impact factor: 6.167

View more
  69 in total

Review 1.  Rethinking segregation and integration: contributions of whole-brain modelling.

Authors:  Gustavo Deco; Giulio Tononi; Melanie Boly; Morten L Kringelbach
Journal:  Nat Rev Neurosci       Date:  2015-06-17       Impact factor: 34.870

Review 2.  Cerebral cartography and connectomics.

Authors:  Olaf Sporns
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2015-05-19       Impact factor: 6.237

3.  Cortical network models of impulse firing in the resting and active states predict cortical energetics.

Authors:  Maxwell R Bennett; Les Farnell; William G Gibson; Jim Lagopoulos
Journal:  Proc Natl Acad Sci U S A       Date:  2015-03-16       Impact factor: 11.205

4.  Mapping complementary features of cross-species structural connectivity to construct realistic "Virtual Brains".

Authors:  Gleb Bezgin; Ana Solodkin; Rembrandt Bakker; Petra Ritter; Anthony R McIntosh
Journal:  Hum Brain Mapp       Date:  2017-01-05       Impact factor: 5.038

Review 5.  On the Usage of Brain Atlases in Neuroimaging Research.

Authors:  Andreas Hess; Rukun Hinz; Georgios A Keliris; Philipp Boehm-Sturm
Journal:  Mol Imaging Biol       Date:  2018-10       Impact factor: 3.488

6.  Recovering directed networks in neuroimaging datasets using partially conditioned Granger causality.

Authors:  Guo-Rong Wu; Wei Liao; Sebastiano Stramaglia; Huafu Chen; Daniele Marinazzo
Journal:  Brain Connect       Date:  2013-05-15

7.  Resting-state networks link invasive and noninvasive brain stimulation across diverse psychiatric and neurological diseases.

Authors:  Michael D Fox; Randy L Buckner; Hesheng Liu; M Mallar Chakravarty; Andres M Lozano; Alvaro Pascual-Leone
Journal:  Proc Natl Acad Sci U S A       Date:  2014-09-29       Impact factor: 11.205

8.  Structural architecture supports functional organization in the human aging brain at a regionwise and network level.

Authors:  Joelle Zimmermann; Petra Ritter; Kelly Shen; Simon Rothmeier; Michael Schirner; Anthony R McIntosh
Journal:  Hum Brain Mapp       Date:  2016-04-04       Impact factor: 5.038

9.  Brain state expression and transitions are related to complex executive cognition in normative neurodevelopment.

Authors:  John D Medaglia; Theodore D Satterthwaite; Apoorva Kelkar; Rastko Ciric; Tyler M Moore; Kosha Ruparel; Ruben C Gur; Raquel E Gur; Danielle S Bassett
Journal:  Neuroimage       Date:  2017-11-07       Impact factor: 6.556

10.  Inferring multi-scale neural mechanisms with brain network modelling.

Authors:  Michael Schirner; Anthony Randal McIntosh; Viktor Jirsa; Gustavo Deco; Petra Ritter
Journal:  Elife       Date:  2018-01-08       Impact factor: 8.140

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.