Literature DB >> 29308767

Inferring multi-scale neural mechanisms with brain network modelling.

Michael Schirner1,2,3, Anthony Randal McIntosh4, Viktor Jirsa5, Gustavo Deco6,7,8,9, Petra Ritter1,2,3,10.   

Abstract

The neurophysiological processes underlying non-invasive brain activity measurements are incompletely understood. Here, we developed a connectome-based brain network model that integrates individual structural and functional data with neural population dynamics to support multi-scale neurophysiological inference. Simulated populations were linked by structural connectivity and, as a novelty, driven by electroencephalography (EEG) source activity. Simulations not only predicted subjects' individual resting-state functional magnetic resonance imaging (fMRI) time series and spatial network topologies over 20 minutes of activity, but more importantly, they also revealed precise neurophysiological mechanisms that underlie and link six empirical observations from different scales and modalities: (1) resting-state fMRI oscillations, (2) functional connectivity networks, (3) excitation-inhibition balance, (4, 5) inverse relationships between α-rhythms, spike-firing and fMRI on short and long time scales, and (6) fMRI power-law scaling. These findings underscore the potential of this new modelling framework for general inference and integration of neurophysiological knowledge to complement empirical studies.
© 2018, Schirner et al.

Entities:  

Keywords:  Brain modeling; EEG; alpha rhythm; computational biology; connectomics; fMRI; human; neuroscience; resting-state networks; systems biology

Mesh:

Year:  2018        PMID: 29308767      PMCID: PMC5802851          DOI: 10.7554/eLife.28927

Source DB:  PubMed          Journal:  Elife        ISSN: 2050-084X            Impact factor:   8.140


  85 in total

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Authors:  W Klimesch
Journal:  Brain Res Brain Res Rev       Date:  1999-04

2.  Probabilistic independent component analysis for functional magnetic resonance imaging.

Authors:  Christian F Beckmann; Stephen M Smith
Journal:  IEEE Trans Med Imaging       Date:  2004-02       Impact factor: 10.048

3.  α-Oscillations in the monkey sensorimotor network influence discrimination performance by rhythmical inhibition of neuronal spiking.

Authors:  Saskia Haegens; Verónica Nácher; Rogelio Luna; Ranulfo Romo; Ole Jensen
Journal:  Proc Natl Acad Sci U S A       Date:  2011-11-14       Impact factor: 11.205

Review 4.  Emerging concepts for the dynamical organization of resting-state activity in the brain.

Authors:  Gustavo Deco; Viktor K Jirsa; Anthony R McIntosh
Journal:  Nat Rev Neurosci       Date:  2011-01       Impact factor: 34.870

5.  Evaluating gradient artifact correction of EEG data acquired simultaneously with fMRI.

Authors:  Petra Ritter; Robert Becker; Christine Graefe; Arno Villringer
Journal:  Magn Reson Imaging       Date:  2007-04-26       Impact factor: 2.546

6.  Predicting human resting-state functional connectivity from structural connectivity.

Authors:  C J Honey; O Sporns; L Cammoun; X Gigandet; J P Thiran; R Meuli; P Hagmann
Journal:  Proc Natl Acad Sci U S A       Date:  2009-02-02       Impact factor: 11.205

7.  A study of the brain's resting state based on alpha band power, heart rate and fMRI.

Authors:  J C de Munck; S I Gonçalves; Th J C Faes; J P A Kuijer; P J W Pouwels; R M Heethaar; F H Lopes da Silva
Journal:  Neuroimage       Date:  2008-05-02       Impact factor: 6.556

8.  Resting-state functional connectivity emerges from structurally and dynamically shaped slow linear fluctuations.

Authors:  Gustavo Deco; Adrián Ponce-Alvarez; Dante Mantini; Gian Luca Romani; Patric Hagmann; Maurizio Corbetta
Journal:  J Neurosci       Date:  2013-07-03       Impact factor: 6.167

9.  Electrophysiological correlates of the brain's intrinsic large-scale functional architecture.

Authors:  Biyu J He; Abraham Z Snyder; John M Zempel; Matthew D Smyth; Marcus E Raichle
Journal:  Proc Natl Acad Sci U S A       Date:  2008-10-08       Impact factor: 11.205

Review 10.  α-band oscillations, attention, and controlled access to stored information.

Authors:  Wolfgang Klimesch
Journal:  Trends Cogn Sci       Date:  2012-11-07       Impact factor: 20.229

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  37 in total

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4.  Multi-scale semi-supervised clustering of brain images: Deriving disease subtypes.

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Journal:  Med Image Anal       Date:  2021-11-11       Impact factor: 8.545

5.  Oscillation-Based Connectivity Architecture Is Dominated by an Intrinsic Spatial Organization, Not Cognitive State or Frequency.

Authors:  Parham Mostame; Sepideh Sadaghiani
Journal:  J Neurosci       Date:  2020-11-17       Impact factor: 6.167

Review 6.  Conflicting emergences. Weak vs. strong emergence for the modelling of brain function.

Authors:  Federico E Turkheimer; Peter Hellyer; Angie A Kehagia; Paul Expert; Louis-David Lord; Jakub Vohryzek; Jessica De Faria Dafflon; Mick Brammer; Robert Leech
Journal:  Neurosci Biobehav Rev       Date:  2019-01-23       Impact factor: 8.989

Review 7.  Measures of resting state EEG rhythms for clinical trials in Alzheimer's disease: Recommendations of an expert panel.

Authors:  Claudio Babiloni; Xianghong Arakaki; Hamed Azami; Karim Bennys; Katarzyna Blinowska; Laura Bonanni; Ana Bujan; Maria C Carrillo; Andrzej Cichocki; Jaisalmer de Frutos-Lucas; Claudio Del Percio; Bruno Dubois; Rebecca Edelmayer; Gary Egan; Stephane Epelbaum; Javier Escudero; Alan Evans; Francesca Farina; Keith Fargo; Alberto Fernández; Raffaele Ferri; Giovanni Frisoni; Harald Hampel; Michael G Harrington; Vesna Jelic; Jaeseung Jeong; Yang Jiang; Maciej Kaminski; Voyko Kavcic; Kerry Kilborn; Sanjeev Kumar; Alice Lam; Lew Lim; Roberta Lizio; David Lopez; Susanna Lopez; Brendan Lucey; Fernando Maestú; William J McGeown; Ian McKeith; Davide Vito Moretti; Flavio Nobili; Giuseppe Noce; John Olichney; Marco Onofrj; Ricardo Osorio; Mario Parra-Rodriguez; Tarek Rajji; Petra Ritter; Andrea Soricelli; Fabrizio Stocchi; Ioannis Tarnanas; John Paul Taylor; Stefan Teipel; Federico Tucci; Mitchell Valdes-Sosa; Pedro Valdes-Sosa; Marco Weiergräber; Gorsev Yener; Bahar Guntekin
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8.  Glutamate connectivity associations converge upon the salience network in schizophrenia and healthy controls.

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9.  Origins of 1/f-like tissue oxygenation fluctuations in the murine cortex.

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Journal:  PLoS Biol       Date:  2021-07-15       Impact factor: 8.029

10.  Network Controllability in Transmodal Cortex Predicts Positive Psychosis Spectrum Symptoms.

Authors:  Linden Parkes; Tyler M Moore; Monica E Calkins; Matthew Cieslak; David R Roalf; Daniel H Wolf; Ruben C Gur; Raquel E Gur; Theodore D Satterthwaite; Danielle S Bassett
Journal:  Biol Psychiatry       Date:  2021-03-21       Impact factor: 12.810

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