| Literature DB >> 23437086 |
Wei Nie1, Yongan Liu, Jiarong Bian, Bin Li, Qingyu Xiu.
Abstract
BACKGROUND: Associations between interleukin-13 (IL-13) polymorphisms and asthma risk remained controversial and ambiguous. Therefore, we performed a meta-analysis to assess the associations between IL-13 polymorphisms and asthma susceptibility.Entities:
Mesh:
Substances:
Year: 2013 PMID: 23437086 PMCID: PMC3577847 DOI: 10.1371/journal.pone.0056065
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Figure 1Flow of study identification, inclusion, and exclusion.
Characteristics of the case-control studies included in meta-analysis.
| First authors/references | Year | Country | Ethnicity | Age group | Atopic status | Case(n) | Control(n) | Genotypingmethod | Qualityscore |
| van der Pouw Kraan | 1999 | Netherlands | Caucasian | NA | Atopic | 101 | 107 | PCR-OLA | 5 |
| Hakonarson | 2001 | Iceland | Caucasian | Mixed | Atopic | 94 | 94 | PCR | 10 |
| Howard | 2001 | Holland | Caucasian | Adults | Mixed | 171 | 119 | Sequencing | 9 |
| Kauppi | 2001 | Finland | Caucasian | NA | NA | 163 | 132 | PCR | 7 |
| Leung | 2001 | China | Asian | Children | Mixed | 157 | 54 | PCR-RFLP | 9 |
| Xi 1 | 2004 | China | Asian | Adults | NA | 45 | 46 | PCR-RFLP | 5 |
| Xi 2 | 2004 | China | Asian | Children | NA | 43 | 31 | PCR-RFLP | 5 |
| Wu | 2004 | China | Asian | Mixed | NA | 100 | 100 | PCR-RFLP | 7 |
| Donfack 1 | 2005 | USA | Caucasian | NA | Mixed | 126 | 205 | DNAprint, LAS | 9 |
| Donfack 2 | 2005 | USA | African American | NA | Mixed | 205 | 183 | DNAprint, LAS | 9 |
| Moissidis | 2005 | USA | African American | Mixed | NA | 61 | 157 | PCR-RFLP | 5 |
| Zhao | 2005 | China | Asian | Children | NA | 130 | 100 | PCR-RFLP | 7 |
| Kabesch | 2006 | Germany | Caucasian | Children | NA | 73 | 773 | PCR-RFLP | 9 |
| Battle | 2007 | USA | African American | Mixed | NA | 264 | 176 | PCR-RFLP | 11 |
| Kang | 2007 | Korea | Asian | Children | NA | 374 | 242 | PCR-RFLP | 11 |
| Chan | 2008 | China | Asian | Children | Mixed | 273 | 141 | PCR-RFLP | 7 |
| Kim | 2008 | Korea | Asian | Children | Mixed | 715 | 240 | PCR-RFLP | 10 |
| Black | 2009 | UK | Caucasian | Adults | NA | 275 | 2453 | Tetra primer PCR | 11 |
| Daley | 2009 | Australia | Caucasian | Mixed | NA | 644 | 751 | Illumina | 9 |
| Bead Array | |||||||||
| System | |||||||||
| H Li | 2009 | China | Asian | Children | NA | 192 | 192 | PCR-RFLP | 8 |
| Jiang | 2009 | China | Asian | Mixed | NA | 24 | 24 | PCR-RFLP | 7 |
| Llanes | 2009 | Spain | Caucasian | Adults | Atopic | 109 | 50 | PCR-RFLP | 8 |
| Wang | 2009 | China | Asian | Children | Mixed | 446 | 511 | Taqman | 8 |
| Feng | 2009 | China | Asian | Children | NA | 45 | 43 | PCR | 6 |
| Wang | 2009 | China | Asian | Adults | NA | 150 | 160 | PCR-RFLP | 6 |
| Bottema | 2010 | Netherlands | Caucasian | Adults | Atopic | 115 | 92 | MassARRAY | 8 |
| Dmitrieva-Zdorova | 2010 | Russia | Caucasian | Adults | Atopic | 283 | 227 | MALDI-TOF mass-spectrometry | 5 |
| Palikhe | 2010 | Korea | Asian | Adults | NA | 463 | 430 | SNAPshot | 6 |
| Undarmaa 1 | 2010 | Japan | Asian | Children | Atopic | 325 | 336 | TaqMan-ASA | 9 |
| Undarmaa 2 | 2010 | Japan | Asian | Adults | Atopic | 367 | 676 | TaqMan-ASA | 9 |
| Wu XH | 2010 | China | Asian | Children | NA | 252 | 227 | PCR-RFLP | 8 |
| Yang LF | 2010 | China | Asian | Children | NA | 178 | 158 | PCR-RFLP | 5 |
| DeWan | 2010 | USA | Mixed | Children | Atopic | 104 | 503 | Affymetrix | 11 |
| Genome-Wide Human | |||||||||
| SNP Array 5.0, TaqMan | |||||||||
| Yang XX | 2011 | China | Asian | Adults | Mixed | 193 | 204 | MALDI-TOF mass-spectrometry | 7 |
| Baye 1 | 2011 | USA | Caucasian | Children | NA | 413 | 298 | IGGAS | 9 |
| Baye 2 | 2011 | USA | African American | Children | NA | 315 | 51 | IGGAS | 9 |
| Noguchi | 2011 | Japan | Asian | Children | Mixed | 938 | 2376 | Illumina HumanHap550v3 | 12 |
| /610-Quad Genotyping BeadChip | |||||||||
| Munoz | 2012 | Mexico | Caucasian | Children | NA | 90 | 111 | TaqMan | 5 |
Data for atopic or non-atopic asthma patients could be separately extracted.
PCR, polymerase chain reaction; OLA, oligonucleotide ligase assay; RFLP, restriction fragment length polymorphism; LAS, multiplex PCR and an immobilized linear array system; TaqMan-ASA, TaqMan allele-specific amplification method; IGGAS, Illumina GoldenGate Assay system; NA, not available.
Distribution of IL-13 genotype among patients and controls.
| Studies | Asthma | Control | HWE | ||||
| 11 | 12 | 22 | 11 | 12 | 22 | ( | |
| −1112C/T | |||||||
| van der Pouw Kraan | 57 | 31 | 13 | 77 | 28 | 2 | 0.765 |
| Howard | 99 | 63 | 9 | 87 | 30 | 2 | 0.748 |
| Wu | 50 | 37 | 13 | 69 | 25 | 6 | 0.087 |
| Donfack 1 | 72 | 42 | 12 | 126 | 71 | 8 | 0.607 |
| Donfack 2 | 69 | 100 | 36 | 66 | 85 | 32 | 0.609 |
| Moissidis | 13 | 36 | 12 | 62 | 75 | 20 | 0.712 |
| Kabesch | 34 | 33 | 6 | 471 | 263 | 39 | 0.770 |
| Battle | 95 | 126 | 42 | 58 | 85 | 30 | 0.905 |
| Kang | 236 | 128 | 10 | 156 | 79 | 6 | 0.276 |
| Kim | 455 | 236 | 25 | 155 | 80 | 6 | 0.246 |
| Black | 158 | 98 | 7 | 1609 | 673 | 80 | 0.353 |
| Daley | 425 | 195 | 22 | 490 | 234 | 27 | 0.886 |
| H Li | 136 | 47 | 9 | 141 | 45 | 6 | 0.312 |
| Wang | 321 | 113 | 12 | 357 | 136 | 18 | 0.265 |
| Bottema | 67 | 43 | 5 | 65 | 23 | 4 | 0.301 |
| Dmitrieva-Zdorova | 149 | 116 | 18 | 117 | 94 | 16 | 0.623 |
| Undarmaa 1 | 190 | 117 | 18 | 227 | 98 | 11 | 0.915 |
| Undarmaa 2 | 230 | 121 | 16 | 459 | 196 | 21 | 0.989 |
| Yang XX | 144 | 43 | 6 | 148 | 50 | 6 | 0.484 |
| Baye 1 | 243 | 148 | 22 | 187 | 98 | 13 | 0.972 |
| Baye 2 | 115 | 151 | 49 | 18 | 25 | 8 | 0.889 |
| Munoz | 45 | 34 | 11 | 58 | 46 | 7 | 0.594 |
| +2044A/G | |||||||
| Hakonarson | 3 | 25 | 66 | 3 | 27 | 64 | 0.941 |
| Howard | 11 | 52 | 89 | 9 | 44 | 67 | 0.637 |
| Kauppi | 17 | 82 | 64 | 19 | 51 | 62 | 0.119 |
| Leung | 29 | 74 | 54 | 7 | 26 | 21 | 0.812 |
| Xi 1 | 6 | 24 | 15 | 3 | 20 | 23 | 0.624 |
| Xi 2 | 8 | 25 | 10 | 2 | 13 | 16 | 0.765 |
| Donfack 1 | 7 | 41 | 79 | 5 | 73 | 127 | 0.141 |
| Donfack 2 | 6 | 67 | 132 | 4 | 53 | 126 | 0.564 |
| Zhao | 52 | 60 | 18 | 50 | 42 | 8 | 0.842 |
| Battle | 9 | 81 | 171 | 5 | 52 | 117 | 0.787 |
| Kang | 48 | 166 | 160 | 28 | 100 | 101 | 0.673 |
| Chan | 43 | 136 | 94 | 17 | 70 | 54 | 0.431 |
| Kim | 90 | 318 | 301 | 28 | 100 | 99 | 0.724 |
| Black | 11 | 98 | 166 | 76 | 657 | 1729 | 0.161 |
| Daley | 22 | 196 | 426 | 21 | 209 | 520 | 0.999 |
| Jiang | 2 | 2 | 20 | 1 | 5 | 18 | 0.422 |
| Llanes | 2 | 38 | 68 | 4 | 54 | 87 | 0.194 |
| Wang | 49 | 194 | 203 | 59 | 234 | 212 | 0.646 |
| Feng | 10 | 19 | 17 | 3 | 10 | 30 | 0.128 |
| Bottema | 6 | 51 | 57 | 3 | 24 | 62 | 0.721 |
| Dmitrieva-Zdorova | 23 | 116 | 144 | 17 | 85 | 125 | 0.630 |
| Palikhe | 56 | 200 | 207 | 50 | 174 | 206 | 0.158 |
| Undarmaa 1 | 36 | 144 | 145 | 34 | 149 | 156 | 0.856 |
| Undarmaa 2 | 39 | 162 | 166 | 65 | 289 | 322 | 0.989 |
| Wu XH | 36 | 111 | 105 | 18 | 84 | 125 | 0.465 |
| Yang LF | 47 | 60 | 71 | 19 | 66 | 73 | 0.497 |
| DeWan | 5 | 34 | 65 | 23 | 171 | 309 | 0.915 |
| Baye 1 | 26 | 157 | 230 | 14 | 101 | 183 | 0.989 |
| Baye 2 | 8 | 87 | 220 | 1 | 14 | 36 | 0.787 |
| Noguchi | 113 | 438 | 387 | 232 | 1033 | 1111 | 0.718 |
| Munoz | 21 | 52 | 17 | 23 | 65 | 23 | 0.071 |
CC or AA;
CT or AG;
TT or GG.
HWE, Hardy-Weinberg equilibrium.
Determination of the genetic effects of IL-13 polymorphisms on asthma and subgroup analyses.
| Polymorphisms | Study | Sample size | No. of studies | Test of association | Model | Heterogeneity | ||||||
| case | control | OR (95% CI) |
|
|
|
|
| |||||
| −1112C/T | ||||||||||||
| TT vs. CC | Overall | 3776 | 5571 | 22 | 1.32 (1.11–1.58) | 3.17 | 0.002 | R | 27.19 | 0.16 | 23.0 | |
| TC vs. CC | Overall | 5461 | 7742 | 22 | 1.17 (1.06–1.30) | 3.06 | 0.002 | R | 30.35 | 0.09 | 31.0 | |
| TT vs. TC | Overall | 2431 | 2907 | 22 | 1.12 (0.94–1.34) | 1.26 | 0.21 | R | 14.98 | 0.82 | 0.0 | |
| TT+TC vs. CC | Overall | 5834 | 8110 | 22 | 1.20 (1.08–1.34) | 3.32 | 0.0009 | R | 35.99 | 0.02 | 42.0 | |
| TT+TC vs. CC | Asian | 2713 | 2501 | 8 | 1.13 (0.97–1.32) | 1.16 | 0.11 | R | 10.55 | 0.16 | 34.0 | |
| TT+TC vs. CC | Caucasian | 2277 | 5045 | 10 | 1.30 (1.09–1.55) | 2.95 | 0.003 | R | 17.87 | 0.04 | 50.0 | |
| TT+TC vs. CC | African | 844 | 564 | 4 | 1.16 (0.80–1.67) | 0.77 | 0.44 | R | 6.21 | 0.10 | 52.0 | |
| American | ||||||||||||
| TT+TC vs. CC | Atopic | 2198 | 2390 | 10 | 1.25 (1.07–1.45) | 2.90 | 0.004 | R | 11.60 | 0.24 | 22.0 | |
| TT+TC vs. CC | Non-atopic | 297 | 952 | 5 | 1.28 (0.97–1.68) | 1.73 | 0.08 | R | 1.29 | 0.86 | 0.0 | |
| +2044A/G | ||||||||||||
| AA vs. GG | Overall | 4808 | 7055 | 31 | 1.28 (1.13–1.46) | 3.81 | 0.0001 | R | 32.41 | 0.35 | 7.0 | |
| AG vs. GG | Overall | 7277 | 10304 | 31 | 1.15 (1.06–1.25) | 3.38 | 0.0007 | R | 37.69 | 0.16 | 20.0 | |
| AA vs. AG | Overall | 4151 | 4935 | 31 | 1.11 (0.99–1.25) | 1.78 | 0.08 | R | 20.39 | 0.91 | 0.0 | |
| AA+AG vs. GG | Overall | 8118 | 11147 | 31 | 1.18 (1.08–1.28) | 3.78 | 0.0002 | R | 44.30 | 0.04 | 32.0 | |
| AA+AG vs. GG | Asian | 4770 | 5603 | 16 | 1.19 (1.04–1.36) | 2.49 | 0.01 | R | 29.20 | 0.02 | 49.0 | |
| AA+AG vs. GG | Caucasian | 2463 | 4633 | 11 | 1.22 (1.06–1.40) | 2.82 | 0.005 | R | 13.25 | 0.21 | 25.0 | |
| AA+AG vs. GG | African | 781 | 408 | 3 | 1.13 (0.86–1.47) | 0.88 | 0.38 | R | 0.25 | 0.88 | 0.0 | |
| American | ||||||||||||
| AA+AG vs. GG | Atopic | 2486 | 2827 | 12 | 1.12 (1.00–1.26) | 1.92 | 0.05 | R | 10.60 | 0.48 | 0.0 | |
| AA+AG vs. GG | Non-atopic | 259 | 789 | 5 | 0.87 (0.60–1.27) | 0.72 | 0.47 | R | 5.42 | 0.25 | 26.0 | |
vs., versus; R, random-effects model.
Figure 2Meta-analysis for the association between asthma risk and the IL-13 −1112C/T polymorphism.
Figure 3One-way sensitivity analysis for the IL-13 −1112C/T polymorphism with asthma risk.
Figure 4Cumulative meta-analysis of associations between the IL-13 −1112C/T polymorphism and asthma risk.
Figure 5Funnel plot for asthma risk and the IL-13 −1112C/T polymorphism.
Figure 6Meta-analysis for the association between asthma risk and the IL-13+2044A/G polymorphism.
Figure 7One-way sensitivity analysis for the IL-13+2044A/G polymorphism with asthma risk.
Figure 8Cumulative meta-analysis of associations between the IL-13+2044A/G polymorphism and asthma risk.
Figure 9Funnel plot for asthma risk and the IL-13+2044A/G polymorphism.