| Literature DB >> 23424523 |
K Jayamoorthy1, T Mohandas, P Sakthivel, J Jayabharathi.
Abstract
In the title mol-ecule, C(20)H(13)F(3)N(2), the benzimidazole unit is close to being planar [maximum deviation = 0.012 (1) Å] and forms dihedral angles of 31.43 (7) and 61.45 (9)° with the 4-(trifluoromethyl)phenyl and 1-phenyl rings, respectively; the dihedral angle between these rings is 60.94 (10)°. In the crystal, C-H⋯F hydrogen bonds link the mol-ecules into chains along the c-axis direction. The CF(3) group is rotationally disordered with an occupancy ratio of 0.557 (8):0.443 (8) for the F atoms.Entities:
Year: 2013 PMID: 23424523 PMCID: PMC3569777 DOI: 10.1107/S1600536813000834
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C20H13F3N2 | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 7057 reflections | |
| θ = 2.3–27.1° | |
| µ = 0.11 mm−1 | |
| α = 67.654 (2)° | |
| β = 68.123 (2)° | Block, colourless |
| γ = 85.013 (2)° | 0.30 × 0.20 × 0.20 mm |
| Bruker Kappa APEXII diffractometer | 2889 independent reflections |
| Radiation source: fine focus sealed tube | 2338 reflections with |
| Graphite monochromator | |
| Detector resolution: 18.4 pixels mm-1 | θmax = 25.0°, θmin = 2.3° |
| ω and φ scan | |
| Absorption correction: multi-scan ( | |
| 16592 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 2889 reflections | (Δ/σ)max = 0.001 |
| 255 parameters | Δρmax = 0.15 e Å−3 |
| 36 restraints | Δρmin = −0.14 e Å−3 |
| Geometry. Bond distances, angles |
| Refinement. Refinement of |
| Occ. (<1) | |||||
| C1 | −0.1427 (3) | 0.2068 (3) | 1.5614 (2) | 0.0834 (5) | |
| C2 | −0.04295 (19) | 0.28680 (17) | 1.41364 (16) | 0.0618 (4) | |
| C3 | 0.0815 (2) | 0.39161 (19) | 1.37506 (17) | 0.0672 (4) | |
| H3 | 0.1005 | 0.4140 | 1.4414 | 0.081* | |
| C4 | 0.17792 (19) | 0.46346 (18) | 1.23902 (17) | 0.0614 (4) | |
| H4 | 0.2612 | 0.5346 | 1.2139 | 0.074* | |
| C5 | 0.15171 (17) | 0.43049 (15) | 1.13943 (15) | 0.0523 (4) | |
| C6 | 0.02360 (19) | 0.32742 (17) | 1.17905 (16) | 0.0590 (4) | |
| H6 | 0.0027 | 0.3061 | 1.1130 | 0.071* | |
| C7 | −0.0730 (2) | 0.25634 (18) | 1.31517 (17) | 0.0635 (4) | |
| H7 | −0.1587 | 0.1876 | 1.3406 | 0.076* | |
| C8 | 0.25824 (17) | 0.51116 (15) | 0.99601 (15) | 0.0524 (4) | |
| C9 | 0.40857 (19) | 0.68454 (16) | 0.81207 (16) | 0.0575 (4) | |
| C10 | 0.4994 (2) | 0.81574 (18) | 0.71278 (18) | 0.0711 (5) | |
| H10 | 0.5086 | 0.8970 | 0.7349 | 0.085* | |
| C11 | 0.5744 (2) | 0.8215 (2) | 0.58197 (19) | 0.0782 (5) | |
| H11 | 0.6351 | 0.9086 | 0.5140 | 0.094* | |
| C12 | 0.5625 (2) | 0.7008 (2) | 0.54771 (18) | 0.0774 (5) | |
| H12 | 0.6156 | 0.7090 | 0.4573 | 0.093* | |
| C13 | 0.4747 (2) | 0.56999 (19) | 0.64349 (17) | 0.0682 (5) | |
| H13 | 0.4676 | 0.4887 | 0.6207 | 0.082* | |
| C14 | 0.39737 (18) | 0.56482 (16) | 0.77574 (15) | 0.0549 (4) | |
| C15 | 0.27055 (17) | 0.30532 (15) | 0.90658 (15) | 0.0539 (4) | |
| C16 | 0.1858 (2) | 0.28353 (19) | 0.83389 (17) | 0.0663 (4) | |
| H16 | 0.1456 | 0.3645 | 0.7795 | 0.080* | |
| C17 | 0.1609 (2) | 0.1411 (2) | 0.8421 (2) | 0.0855 (6) | |
| H17 | 0.1055 | 0.1259 | 0.7918 | 0.103* | |
| C18 | 0.2174 (3) | 0.0223 (2) | 0.9239 (3) | 0.0940 (7) | |
| H18 | 0.1999 | −0.0738 | 0.9296 | 0.113* | |
| C19 | 0.2999 (2) | 0.0440 (2) | 0.9977 (2) | 0.0926 (7) | |
| H19 | 0.3362 | −0.0377 | 1.0547 | 0.111* | |
| C20 | 0.3294 (2) | 0.18642 (18) | 0.9882 (2) | 0.0743 (5) | |
| H20 | 0.3882 | 0.2016 | 1.0363 | 0.089* | |
| N1 | 0.32109 (16) | 0.64829 (13) | 0.95021 (13) | 0.0604 (4) | |
| N2 | 0.29987 (15) | 0.45366 (12) | 0.89494 (12) | 0.0530 (3) | |
| F1 | −0.2223 (12) | 0.0892 (8) | 1.5887 (4) | 0.142 (3) | 0.557 (8) |
| F2 | −0.2557 (8) | 0.2984 (5) | 1.6041 (5) | 0.1329 (18) | 0.557 (8) |
| F3 | −0.0570 (6) | 0.1792 (13) | 1.6361 (4) | 0.160 (3) | 0.557 (8) |
| F1' | −0.2976 (8) | 0.1695 (15) | 1.5888 (7) | 0.155 (4) | 0.443 (8) |
| F2' | −0.1517 (17) | 0.2719 (7) | 1.6418 (4) | 0.140 (3) | 0.443 (8) |
| F3' | −0.0821 (14) | 0.0771 (8) | 1.6144 (5) | 0.160 (3) | 0.443 (8) |
| F1 | 0.203 (7) | 0.116 (3) | 0.0732 (19) | −0.092 (4) | −0.010 (3) | −0.018 (3) |
| F2 | 0.122 (3) | 0.158 (4) | 0.084 (2) | 0.009 (3) | 0.007 (2) | −0.053 (2) |
| F3 | 0.141 (3) | 0.231 (7) | 0.069 (2) | −0.037 (4) | −0.056 (2) | 0.013 (4) |
| N1 | 0.0698 (8) | 0.0499 (7) | 0.0627 (8) | 0.0024 (6) | −0.0207 (6) | −0.0258 (6) |
| N2 | 0.0609 (7) | 0.0454 (7) | 0.0545 (7) | 0.0035 (5) | −0.0201 (6) | −0.0220 (6) |
| C1 | 0.0916 (14) | 0.0895 (15) | 0.0642 (12) | −0.0089 (12) | −0.0223 (11) | −0.0268 (11) |
| C2 | 0.0670 (10) | 0.0589 (9) | 0.0589 (10) | 0.0050 (7) | −0.0227 (8) | −0.0224 (8) |
| C3 | 0.0728 (10) | 0.0776 (11) | 0.0603 (10) | 0.0032 (8) | −0.0255 (8) | −0.0340 (9) |
| C4 | 0.0620 (9) | 0.0639 (9) | 0.0656 (10) | −0.0008 (7) | −0.0222 (8) | −0.0321 (8) |
| C5 | 0.0559 (8) | 0.0482 (8) | 0.0580 (9) | 0.0100 (6) | −0.0232 (7) | −0.0247 (7) |
| C6 | 0.0647 (9) | 0.0606 (9) | 0.0600 (9) | 0.0036 (7) | −0.0265 (8) | −0.0278 (8) |
| C7 | 0.0651 (9) | 0.0593 (9) | 0.0648 (10) | −0.0033 (7) | −0.0218 (8) | −0.0227 (8) |
| C8 | 0.0570 (8) | 0.0473 (8) | 0.0590 (9) | 0.0084 (6) | −0.0240 (7) | −0.0248 (7) |
| C9 | 0.0622 (9) | 0.0488 (8) | 0.0607 (9) | 0.0044 (7) | −0.0212 (7) | −0.0215 (7) |
| C10 | 0.0803 (11) | 0.0526 (9) | 0.0746 (12) | −0.0029 (8) | −0.0221 (9) | −0.0227 (8) |
| C11 | 0.0835 (12) | 0.0625 (10) | 0.0695 (12) | −0.0103 (9) | −0.0175 (9) | −0.0122 (9) |
| C12 | 0.0835 (12) | 0.0795 (12) | 0.0583 (10) | −0.0090 (10) | −0.0138 (9) | −0.0236 (9) |
| C13 | 0.0758 (10) | 0.0674 (10) | 0.0616 (10) | −0.0032 (8) | −0.0189 (8) | −0.0293 (9) |
| C14 | 0.0579 (8) | 0.0492 (8) | 0.0578 (9) | 0.0039 (6) | −0.0209 (7) | −0.0206 (7) |
| C15 | 0.0528 (8) | 0.0470 (8) | 0.0604 (9) | 0.0042 (6) | −0.0135 (7) | −0.0259 (7) |
| C16 | 0.0696 (10) | 0.0668 (10) | 0.0642 (10) | −0.0043 (8) | −0.0179 (8) | −0.0313 (8) |
| C17 | 0.0841 (12) | 0.0859 (14) | 0.0873 (14) | −0.0208 (11) | −0.0080 (10) | −0.0510 (12) |
| C18 | 0.0763 (12) | 0.0638 (12) | 0.1207 (18) | −0.0121 (10) | 0.0082 (12) | −0.0525 (13) |
| C19 | 0.0771 (12) | 0.0520 (10) | 0.1213 (18) | 0.0141 (9) | −0.0182 (12) | −0.0242 (11) |
| C20 | 0.0694 (10) | 0.0558 (10) | 0.0954 (13) | 0.0136 (8) | −0.0318 (10) | −0.0268 (9) |
| F3' | 0.229 (7) | 0.098 (4) | 0.084 (3) | 0.048 (4) | −0.030 (4) | 0.003 (2) |
| F2' | 0.226 (8) | 0.108 (4) | 0.063 (2) | −0.050 (4) | −0.005 (4) | −0.042 (3) |
| F1' | 0.107 (4) | 0.209 (9) | 0.089 (3) | −0.058 (4) | −0.023 (2) | 0.008 (5) |
| F1—C1 | 1.258 (9) | C11—C12 | 1.387 (3) |
| F1'—C1 | 1.319 (8) | C12—C13 | 1.369 (3) |
| F2—C1 | 1.346 (7) | C13—C14 | 1.382 (2) |
| F2'—C1 | 1.270 (8) | C15—C20 | 1.374 (2) |
| F3—C1 | 1.271 (6) | C15—C16 | 1.373 (2) |
| F3'—C1 | 1.328 (9) | C16—C17 | 1.377 (3) |
| N1—C8 | 1.312 (2) | C17—C18 | 1.363 (4) |
| N1—C9 | 1.380 (2) | C18—C19 | 1.369 (4) |
| N2—C8 | 1.3785 (19) | C19—C20 | 1.381 (3) |
| N2—C14 | 1.381 (2) | C3—H3 | 0.9300 |
| N2—C15 | 1.428 (2) | C4—H4 | 0.9300 |
| C1—C2 | 1.488 (3) | C6—H6 | 0.9300 |
| C2—C3 | 1.377 (3) | C7—H7 | 0.9300 |
| C2—C7 | 1.375 (2) | C10—H10 | 0.9300 |
| C3—C4 | 1.377 (2) | C11—H11 | 0.9300 |
| C4—C5 | 1.384 (2) | C12—H12 | 0.9300 |
| C5—C8 | 1.469 (2) | C13—H13 | 0.9300 |
| C5—C6 | 1.387 (2) | C16—H16 | 0.9300 |
| C6—C7 | 1.377 (2) | C17—H17 | 0.9300 |
| C9—C14 | 1.392 (2) | C18—H18 | 0.9300 |
| C9—C10 | 1.390 (2) | C19—H19 | 0.9300 |
| C10—C11 | 1.363 (3) | C20—H20 | 0.9300 |
| C8—N1—C9 | 105.22 (13) | N2—C14—C13 | 131.82 (16) |
| C8—N2—C14 | 106.09 (12) | C9—C14—C13 | 122.50 (15) |
| C8—N2—C15 | 129.34 (12) | N2—C15—C16 | 119.38 (15) |
| C14—N2—C15 | 124.15 (12) | N2—C15—C20 | 119.91 (15) |
| F1—C1—F2 | 106.3 (5) | C16—C15—C20 | 120.70 (16) |
| F1—C1—F3 | 109.8 (6) | C15—C16—C17 | 119.60 (18) |
| F1—C1—C2 | 114.8 (3) | C16—C17—C18 | 120.1 (2) |
| F2—C1—F3 | 104.2 (6) | C17—C18—C19 | 120.2 (2) |
| F2—C1—C2 | 108.4 (3) | C18—C19—C20 | 120.4 (2) |
| F3—C1—C2 | 112.5 (3) | C15—C20—C19 | 118.9 (2) |
| F1'—C1—C2 | 114.9 (3) | C2—C3—H3 | 120.00 |
| F2'—C1—C2 | 117.1 (4) | C4—C3—H3 | 120.00 |
| F3'—C1—C2 | 112.0 (4) | C3—C4—H4 | 120.00 |
| F1'—C1—F2' | 104.8 (8) | C5—C4—H4 | 120.00 |
| F1'—C1—F3' | 103.7 (8) | C5—C6—H6 | 120.00 |
| F2'—C1—F3' | 102.8 (6) | C7—C6—H6 | 120.00 |
| C1—C2—C3 | 119.76 (17) | C2—C7—H7 | 120.00 |
| C1—C2—C7 | 120.63 (18) | C6—C7—H7 | 120.00 |
| C3—C2—C7 | 119.62 (15) | C9—C10—H10 | 121.00 |
| C2—C3—C4 | 120.44 (16) | C11—C10—H10 | 121.00 |
| C3—C4—C5 | 120.38 (17) | C10—C11—H11 | 119.00 |
| C4—C5—C6 | 118.73 (14) | C12—C11—H11 | 119.00 |
| C4—C5—C8 | 117.86 (14) | C11—C12—H12 | 119.00 |
| C6—C5—C8 | 123.37 (14) | C13—C12—H12 | 119.00 |
| C5—C6—C7 | 120.67 (16) | C12—C13—H13 | 122.00 |
| C2—C7—C6 | 120.13 (17) | C14—C13—H13 | 122.00 |
| N1—C8—N2 | 112.81 (13) | C15—C16—H16 | 120.00 |
| N1—C8—C5 | 122.94 (14) | C17—C16—H16 | 120.00 |
| N2—C8—C5 | 124.24 (14) | C16—C17—H17 | 120.00 |
| N1—C9—C10 | 130.14 (16) | C18—C17—H17 | 120.00 |
| N1—C9—C14 | 110.21 (14) | C17—C18—H18 | 120.00 |
| C10—C9—C14 | 119.65 (15) | C19—C18—H18 | 120.00 |
| C9—C10—C11 | 117.88 (17) | C18—C19—H19 | 120.00 |
| C10—C11—C12 | 121.69 (18) | C20—C19—H19 | 120.00 |
| C11—C12—C13 | 121.68 (17) | C15—C20—H20 | 121.00 |
| C12—C13—C14 | 116.59 (17) | C19—C20—H20 | 121.00 |
| N2—C14—C9 | 105.68 (13) | ||
| C9—N1—C8—C5 | −178.47 (15) | C3—C4—C5—C8 | 179.82 (16) |
| C8—N1—C9—C10 | 179.79 (19) | C6—C5—C8—N1 | 147.01 (17) |
| C9—N1—C8—N2 | 0.13 (19) | C4—C5—C8—N2 | 150.81 (16) |
| C8—N1—C9—C14 | −0.27 (19) | C8—C5—C6—C7 | −179.41 (16) |
| C8—N2—C14—C9 | −0.22 (18) | C4—C5—C6—C7 | −1.7 (3) |
| C15—N2—C14—C9 | −173.36 (15) | C4—C5—C8—N1 | −30.8 (2) |
| C14—N2—C15—C20 | 114.16 (19) | C6—C5—C8—N2 | −31.4 (3) |
| C14—N2—C8—N1 | 0.06 (19) | C5—C6—C7—C2 | −0.2 (3) |
| C15—N2—C8—C5 | −8.7 (3) | N1—C9—C10—C11 | −179.91 (19) |
| C8—N2—C14—C13 | 179.45 (19) | C14—C9—C10—C11 | 0.2 (3) |
| C14—N2—C8—C5 | 178.63 (15) | N1—C9—C14—N2 | 0.31 (19) |
| C8—N2—C15—C20 | −57.3 (2) | C10—C9—C14—N2 | −179.74 (16) |
| C15—N2—C8—N1 | 172.71 (15) | C10—C9—C14—C13 | 0.6 (3) |
| C14—N2—C15—C16 | −64.8 (2) | N1—C9—C14—C13 | −179.40 (16) |
| C8—N2—C15—C16 | 123.79 (18) | C9—C10—C11—C12 | −0.5 (3) |
| C15—N2—C14—C13 | 6.3 (3) | C10—C11—C12—C13 | 0.1 (3) |
| F1—C1—C2—C3 | −162.7 (5) | C11—C12—C13—C14 | 0.6 (3) |
| F1—C1—C2—C7 | 16.9 (6) | C12—C13—C14—N2 | 179.49 (18) |
| F3—C1—C2—C3 | −36.2 (7) | C12—C13—C14—C9 | −0.9 (3) |
| F2—C1—C2—C3 | 78.6 (4) | N2—C15—C16—C17 | 178.39 (17) |
| F2—C1—C2—C7 | −101.9 (4) | C20—C15—C16—C17 | −0.5 (3) |
| F3—C1—C2—C7 | 143.4 (6) | N2—C15—C20—C19 | −179.86 (19) |
| C7—C2—C3—C4 | −1.4 (3) | C16—C15—C20—C19 | −1.0 (3) |
| C3—C2—C7—C6 | 1.7 (3) | C15—C16—C17—C18 | 1.2 (3) |
| C1—C2—C3—C4 | 178.2 (2) | C16—C17—C18—C19 | −0.3 (4) |
| C1—C2—C7—C6 | −177.9 (2) | C17—C18—C19—C20 | −1.2 (4) |
| C2—C3—C4—C5 | −0.5 (3) | C18—C19—C20—C15 | 1.8 (4) |
| C3—C4—C5—C6 | 2.0 (3) |
| H··· | ||||
| C17—H17···F3i | 0.93 | 2.54 | 3.429 (6) | 160 |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| C17—H17⋯F3i | 0.93 | 2.54 | 3.429 (6) | 160 |
Symmetry code: (i) .