Literature DB >> 32808608

Chemically triggered crosslinking with bioorthogonal cyclopropenones.

R David Row1, Sean S Nguyen1, Andrew J Ferreira1, Jennifer A Prescher2.   

Abstract

We report a proximity-driven crosslinking strategy featuring bioorthogonal cyclopropenones. These motifs react with phosphines to form electrophilic ketene-ylides. Such intermediates can be trapped by neighboring proteins to form covalent adducts. Successful crosslinking was achieved using a model split reporter, and the rate of crosslinking could be tuned using different phosphine triggers. We further demonstrated that the reaction can be performed in cell lysate. Based on these features, we anticipate that cyclopropenones will enable unique studies of protein-protein and other biomolecule interactions.

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Year:  2020        PMID: 32808608      PMCID: PMC7501174          DOI: 10.1039/d0cc04600k

Source DB:  PubMed          Journal:  Chem Commun (Camb)        ISSN: 1359-7345            Impact factor:   6.222


  42 in total

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Authors:  Tuan-Anh Nguyen; Marko Cigler; Kathrin Lang
Journal:  Angew Chem Int Ed Engl       Date:  2018-10-03       Impact factor: 15.336

Review 2.  The Life of Pi Star: Exploring the Exciting and Forbidden Worlds of the Benzophenone Photophore.

Authors:  György Dormán; Hiroyuki Nakamura; Abigail Pulsipher; Glenn D Prestwich
Journal:  Chem Rev       Date:  2016-12-16       Impact factor: 60.622

3.  Proximity-Triggered Covalent Stabilization of Low-Affinity Protein Complexes In Vitro and In Vivo.

Authors:  Marko Cigler; Thorsten G Müller; Daniel Horn-Ghetko; Marie-Kristin von Wrisberg; Maximilian Fottner; Roger S Goody; Aymelt Itzen; Matthias P Müller; Kathrin Lang
Journal:  Angew Chem Int Ed Engl       Date:  2017-11-09       Impact factor: 15.336

4.  Macromolecular crowding extended to a heptameric system: the Co-chaperonin protein 10.

Authors:  Ximena Aguilar; Christoph F Weise; Tobias Sparrman; Magnus Wolf-Watz; Pernilla Wittung-Stafshede
Journal:  Biochemistry       Date:  2011-03-21       Impact factor: 3.162

5.  Ligand and Target Discovery by Fragment-Based Screening in Human Cells.

Authors:  Christopher G Parker; Andrea Galmozzi; Yujia Wang; Bruno E Correia; Kenji Sasaki; Christopher M Joslyn; Arthur S Kim; Cullen L Cavallaro; R Michael Lawrence; Stephen R Johnson; Iñigo Narvaiza; Enrique Saez; Benjamin F Cravatt
Journal:  Cell       Date:  2017-01-19       Impact factor: 41.582

6.  A Bifunctional Amino Acid Enables Both Covalent Chemical Capture and Isolation of in Vivo Protein-Protein Interactions.

Authors:  Cassandra M Joiner; Meghan E Breen; James Clayton; Anna K Mapp
Journal:  Chembiochem       Date:  2016-12-14       Impact factor: 3.164

7.  Genetically encoded chemical probes in cells reveal the binding path of urocortin-I to CRF class B GPCR.

Authors:  Irene Coin; Vsevolod Katritch; Tingting Sun; Zheng Xiang; Fai Yiu Siu; Michael Beyermann; Raymond C Stevens; Lei Wang
Journal:  Cell       Date:  2013-11-27       Impact factor: 41.582

8.  Genetically encoded cleavable protein photo-cross-linker.

Authors:  Shixian Lin; Dan He; Teng Long; Shuai Zhang; Rong Meng; Peng R Chen
Journal:  J Am Chem Soc       Date:  2014-08-13       Impact factor: 15.419

Review 9.  Arylfluorosulfate-Based Electrophiles for Covalent Protein Labeling: A New Addition to the Arsenal.

Authors:  Pablo Martín-Gago; Christian A Olsen
Journal:  Angew Chem Int Ed Engl       Date:  2018-10-26       Impact factor: 15.336

10.  Proteome-wide Map of Targets of T790M-EGFR-Directed Covalent Inhibitors.

Authors:  Sherry Niessen; Melissa M Dix; Sabrina Barbas; Zachary E Potter; Shuyan Lu; Oleg Brodsky; Simon Planken; Douglas Behenna; Chau Almaden; Ketan S Gajiwala; Kevin Ryan; RoseAnn Ferre; Michael R Lazear; Matthew M Hayward; John C Kath; Benjamin F Cravatt
Journal:  Cell Chem Biol       Date:  2017-09-28       Impact factor: 8.116

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  3 in total

1.  Fluorogenic Cyclopropenones for Multicomponent, Real-Time Imaging.

Authors:  Tyler K Heiss; Robert S Dorn; Andrew J Ferreira; Anna C Love; Jennifer A Prescher
Journal:  J Am Chem Soc       Date:  2022-04-20       Impact factor: 16.383

Review 2.  Flipping the Switch: Innovations in Inducible Probes for Protein Profiling.

Authors:  Sean M McKenna; Ellen M Fay; Joanna F McGouran
Journal:  ACS Chem Biol       Date:  2021-11-15       Impact factor: 5.100

3.  Platform for Orthogonal N-Cysteine-Specific Protein Modification Enabled by Cyclopropenone Reagents.

Authors:  Alena Istrate; Michael B Geeson; Claudio D Navo; Barbara B Sousa; Marta C Marques; Ross J Taylor; Toby Journeaux; Sebastian R Oehler; Michael R Mortensen; Michael J Deery; Andrew D Bond; Francisco Corzana; Gonzalo Jiménez-Osés; Gonçalo J L Bernardes
Journal:  J Am Chem Soc       Date:  2022-06-05       Impact factor: 16.383

  3 in total

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