Literature DB >> 23392618

Hypermorphic expression of centromeric retroelement-encoded small RNAs impairs CENP-A loading.

Dawn M Carone1, Chu Zhang, Laura E Hall, Craig Obergfell, Benjamin R Carone, Michael J O'Neill, Rachel J O'Neill.   

Abstract

The proper functioning of centromeres requires a complex cascade of epigenetic events involving chromatin and kinetochore assembly; however, the precise mechanism by which this cascade proceeds is unknown. The pivotal event during kinetochore formation is the "loading," or deposition, of CENP-A. This histone H3 variant is specific to centromeres and replaces conventional H3 in centromeric chromatin. Failure to load CENP-A into mammalian centromeres in late telophase/early G1 of the cell cycle leads to malsegregation and cell division defects in subsequent cell cycles. Mounting evidence supports the hypothesis that an RNA component is involved, although how RNAs participate in centromere formation in mammals has remained unknown. Using the marsupial model, the tammar wallaby, we show that centromeric retroelements produce small RNAs and that hypermorphic expression of these centromeric small RNAs results in disruption of CENP-A localization. We propose that tight regulation of the processing of this new class of small RNAs, crasiRNAs, is an integral component of the epigenetic framework necessary for centromere establishment.

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Year:  2013        PMID: 23392618     DOI: 10.1007/s10577-013-9337-0

Source DB:  PubMed          Journal:  Chromosome Res        ISSN: 0967-3849            Impact factor:   5.239


  69 in total

1.  The eukaryotic genome as an RNA machine.

Authors:  Paulo P Amaral; Marcel E Dinger; Tim R Mercer; John S Mattick
Journal:  Science       Date:  2008-03-28       Impact factor: 47.728

2.  Undermethylation associated with retroelement activation and chromosome remodelling in an interspecific mammalian hybrid.

Authors:  R J O'Neill; M J O'Neill; J A Graves
Journal:  Nature       Date:  1998-05-07       Impact factor: 49.962

3.  A novel chromatin immunoprecipitation and array (CIA) analysis identifies a 460-kb CENP-A-binding neocentromere DNA.

Authors:  A W Lo; D J Magliano; M C Sibson; P Kalitsis; J M Craig; K H Choo
Journal:  Genome Res       Date:  2001-03       Impact factor: 9.043

4.  Epigenetic engineering: histone H3K9 acetylation is compatible with kinetochore structure and function.

Authors:  Jan H Bergmann; Julia N Jakubsche; Nuno M Martins; Alexander Kagansky; Megumi Nakano; Hiroshi Kimura; David A Kelly; Bryan M Turner; Hiroshi Masumoto; Vladimir Larionov; William C Earnshaw
Journal:  J Cell Sci       Date:  2012-02-13       Impact factor: 5.285

5.  DNA binding of centromere protein C (CENPC) is stabilized by single-stranded RNA.

Authors:  Yaqing Du; Christopher N Topp; R Kelly Dawe
Journal:  PLoS Genet       Date:  2010-02-05       Impact factor: 5.917

6.  Genomic microarray analysis reveals distinct locations for the CENP-A binding domains in three human chromosome 13q32 neocentromeres.

Authors:  Alicia Alonso; Radma Mahmood; Shulan Li; Fanny Cheung; Kinya Yoda; Peter E Warburton
Journal:  Hum Mol Genet       Date:  2003-08-19       Impact factor: 6.150

7.  Regulation of heterochromatic silencing and histone H3 lysine-9 methylation by RNAi.

Authors:  Thomas A Volpe; Catherine Kidner; Ira M Hall; Grace Teng; Shiv I S Grewal; Robert A Martienssen
Journal:  Science       Date:  2002-08-22       Impact factor: 47.728

8.  Genes required for mitotic spindle assembly in Drosophila S2 cells.

Authors:  Gohta Goshima; Roy Wollman; Sarah S Goodwin; Nan Zhang; Jonathan M Scholey; Ronald D Vale; Nico Stuurman
Journal:  Science       Date:  2007-04-05       Impact factor: 47.728

9.  A transcriptomic analysis of human centromeric and pericentric sequences in normal and tumor cells.

Authors:  Angéline Eymery; Béatrice Horard; Michèle El Atifi-Borel; Geneviève Fourel; François Berger; Anne-Laure Vitte; Arnaud Van den Broeck; Elisabeth Brambilla; Alexandra Fournier; Mary Callanan; Sylvie Gazzeri; Saadi Khochbin; Sophie Rousseaux; Eric Gilson; Claire Vourc'h
Journal:  Nucleic Acids Res       Date:  2009-08-31       Impact factor: 16.971

10.  Co-localization of CENP-C and CENP-H to discontinuous domains of CENP-A chromatin at human neocentromeres.

Authors:  Alicia Alonso; Björn Fritz; Dan Hasson; György Abrusan; Fanny Cheung; Kinya Yoda; Bernhard Radlwimmer; Andreas G Ladurner; Peter E Warburton
Journal:  Genome Biol       Date:  2007       Impact factor: 13.583

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  19 in total

Review 1.  No longer a nuisance: long non-coding RNAs join CENP-A in epigenetic centromere regulation.

Authors:  Silvana Rošić; Sylvia Erhardt
Journal:  Cell Mol Life Sci       Date:  2016-01-09       Impact factor: 9.261

Review 2.  Transcription and ncRNAs: at the cent(rome)re of kinetochore assembly and maintenance.

Authors:  Kristin C Scott
Journal:  Chromosome Res       Date:  2013-12       Impact factor: 5.239

Review 3.  Epigenetic Regulation of Centromere Chromatin Stability by Dietary and Environmental Factors.

Authors:  Diego Hernández-Saavedra; Rita S Strakovsky; Patricia Ostrosky-Wegman; Yuan-Xiang Pan
Journal:  Adv Nutr       Date:  2017-11-15       Impact factor: 8.701

4.  Human centromere repositioning within euchromatin after partial chromosome deletion.

Authors:  Lori L Sullivan; Kristin A Maloney; Aaron J Towers; Simon G Gregory; Beth A Sullivan
Journal:  Chromosome Res       Date:  2016-08-31       Impact factor: 5.239

Review 5.  Orchestrating the Specific Assembly of Centromeric Nucleosomes.

Authors:  Ewelina Zasadzińska; Daniel R Foltz
Journal:  Prog Mol Subcell Biol       Date:  2017

6.  From telomere to telomere: The transcriptional and epigenetic state of human repeat elements.

Authors:  Jessica M Storer; Gabrielle A Hartley; Patrick G S Grady; Ariel Gershman; Savannah J Hoyt; Leonardo G de Lima; Charles Limouse; Reza Halabian; Luke Wojenski; Matias Rodriguez; Nicolas Altemose; Arang Rhie; Leighton J Core; Jennifer L Gerton; Wojciech Makalowski; Daniel Olson; Jeb Rosen; Arian F A Smit; Aaron F Straight; Mitchell R Vollger; Travis J Wheeler; Michael C Schatz; Evan E Eichler; Adam M Phillippy; Winston Timp; Karen H Miga; Rachel J O'Neill
Journal:  Science       Date:  2022-04-01       Impact factor: 63.714

7.  Human Centromeres Produce Chromosome-Specific and Array-Specific Alpha Satellite Transcripts that Are Complexed with CENP-A and CENP-C.

Authors:  Shannon M McNulty; Lori L Sullivan; Beth A Sullivan
Journal:  Dev Cell       Date:  2017-08-07       Impact factor: 13.417

Review 8.  Centromere identity from the DNA point of view.

Authors:  Miroslav Plohl; Nevenka Meštrović; Brankica Mravinac
Journal:  Chromosoma       Date:  2014-04-25       Impact factor: 4.316

9.  A long non-coding RNA is required for targeting centromeric protein A to the human centromere.

Authors:  Delphine Quénet; Yamini Dalal
Journal:  Elife       Date:  2014-08-12       Impact factor: 8.140

10.  Identification of a recently active mammalian SINE derived from ribosomal RNA.

Authors:  Mark S Longo; Judy D Brown; Chu Zhang; Michael J O'Neill; Rachel J O'Neill
Journal:  Genome Biol Evol       Date:  2015-01-29       Impact factor: 3.416

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