Literature DB >> 22331359

Epigenetic engineering: histone H3K9 acetylation is compatible with kinetochore structure and function.

Jan H Bergmann1, Julia N Jakubsche, Nuno M Martins, Alexander Kagansky, Megumi Nakano, Hiroshi Kimura, David A Kelly, Bryan M Turner, Hiroshi Masumoto, Vladimir Larionov, William C Earnshaw.   

Abstract

Human kinetochores are transcriptionally active, producing very low levels of transcripts of the underlying alpha-satellite DNA. However, it is not known whether kinetochores can tolerate acetylated chromatin and the levels of transcription that are characteristic of housekeeping genes, or whether kinetochore-associated 'centrochromatin', despite being transcribed at a low level, is essentially a form of repressive chromatin. Here, we have engineered two types of acetylated chromatin within the centromere of a synthetic human artificial chromosome. Tethering a minimal NF-κB p65 activation domain within kinetochore-associated chromatin produced chromatin with high levels of histone H3 acetylated on lysine 9 (H3K9ac) and an ~10-fold elevation in transcript levels, but had no substantial effect on kinetochore assembly or function. By contrast, tethering the herpes virus VP16 activation domain produced similar modifications in the chromatin but resulted in an ~150-fold elevation in transcripts, approaching the level of transcription of an endogenous housekeeping gene. This rapidly inactivated kinetochores, causing a loss of assembled CENP-A and blocking further CENP-A assembly. Our data reveal that functional centromeres in vivo show a remarkable plasticity--kinetochores tolerate profound changes to their chromatin environment, but appear to be critically sensitive to the level of centromeric transcription.

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Year:  2012        PMID: 22331359      PMCID: PMC3283876          DOI: 10.1242/jcs.090639

Source DB:  PubMed          Journal:  J Cell Sci        ISSN: 0021-9533            Impact factor:   5.285


  53 in total

Review 1.  Structural and functional dynamics of human centromeric chromatin.

Authors:  Mary G Schueler; Beth A Sullivan
Journal:  Annu Rev Genomics Hum Genet       Date:  2006       Impact factor: 8.929

2.  Assembly of additional heterochromatin distinct from centromere-kinetochore chromatin is required for de novo formation of human artificial chromosome.

Authors:  Hiroshi Nakashima; Megumi Nakano; Ryoko Ohnishi; Yasushi Hiraoka; Yasufumi Kaneda; Akio Sugino; Hiroshi Masumoto
Journal:  J Cell Sci       Date:  2005-12-15       Impact factor: 5.285

Review 3.  Nucleosome displacement in transcription.

Authors:  Jerry L Workman
Journal:  Genes Dev       Date:  2006-08-01       Impact factor: 11.361

4.  Priming of centromere for CENP-A recruitment by human hMis18alpha, hMis18beta, and M18BP1.

Authors:  Yohta Fujita; Takeshi Hayashi; Tomomi Kiyomitsu; Yusuke Toyoda; Aya Kokubu; Chikashi Obuse; Mitsuhiro Yanagida
Journal:  Dev Cell       Date:  2007-01       Impact factor: 12.270

5.  Condensin regulates the stiffness of vertebrate centromeres.

Authors:  Susana A Ribeiro; Jesse C Gatlin; Yimin Dong; Ajit Joglekar; Lisa Cameron; Damien F Hudson; Christine J Farr; Bruce F McEwen; Edward D Salmon; William C Earnshaw; Paola Vagnarelli
Journal:  Mol Biol Cell       Date:  2009-03-04       Impact factor: 4.138

6.  Common effects of acidic activators on large-scale chromatin structure and transcription.

Authors:  Anne E Carpenter; Sevinci Memedula; Matthew J Plutz; Andrew S Belmont
Journal:  Mol Cell Biol       Date:  2005-02       Impact factor: 4.272

7.  Human centromeric chromatin is a dynamic chromosomal domain that can spread over noncentromeric DNA.

Authors:  Ai Leen Lam; Christopher D Boivin; Caitlin F Bonney; M Katharine Rudd; Beth A Sullivan
Journal:  Proc Natl Acad Sci U S A       Date:  2006-03-06       Impact factor: 11.205

8.  Centromere-specific assembly of CENP-a nucleosomes is mediated by HJURP.

Authors:  Daniel R Foltz; Lars E T Jansen; Aaron O Bailey; John R Yates; Emily A Bassett; Stacey Wood; Ben E Black; Don W Cleveland
Journal:  Cell       Date:  2009-05-01       Impact factor: 41.582

9.  HJURP is a cell-cycle-dependent maintenance and deposition factor of CENP-A at centromeres.

Authors:  Elaine M Dunleavy; Danièle Roche; Hideaki Tagami; Nicolas Lacoste; Dominique Ray-Gallet; Yusuke Nakamura; Yataro Daigo; Yoshihiro Nakatani; Geneviève Almouzni-Pettinotti
Journal:  Cell       Date:  2009-05-01       Impact factor: 41.582

Review 10.  Epigenetic regulation of centromeric chromatin: old dogs, new tricks?

Authors:  Robin C Allshire; Gary H Karpen
Journal:  Nat Rev Genet       Date:  2008-12       Impact factor: 53.242

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  60 in total

Review 1.  Pericentric and centromeric transcription: a perfect balance required.

Authors:  Laura E Hall; Sarah E Mitchell; Rachel J O'Neill
Journal:  Chromosome Res       Date:  2012-07       Impact factor: 5.239

Review 2.  Putting CENP-A in its place.

Authors:  Madison E Stellfox; Aaron O Bailey; Daniel R Foltz
Journal:  Cell Mol Life Sci       Date:  2012-06-23       Impact factor: 9.261

Review 3.  Transcription of tandemly repetitive DNA: functional roles.

Authors:  Maria Assunta Biscotti; Adriana Canapa; Mariko Forconi; Ettore Olmo; Marco Barucca
Journal:  Chromosome Res       Date:  2015-09       Impact factor: 5.239

Review 4.  No longer a nuisance: long non-coding RNAs join CENP-A in epigenetic centromere regulation.

Authors:  Silvana Rošić; Sylvia Erhardt
Journal:  Cell Mol Life Sci       Date:  2016-01-09       Impact factor: 9.261

Review 5.  Noisy silence: non-coding RNA and heterochromatin formation at repetitive elements.

Authors:  Holger Bierhoff; Anna Postepska-Igielska; Ingrid Grummt
Journal:  Epigenetics       Date:  2013-10-11       Impact factor: 4.528

Review 6.  Transcription and ncRNAs: at the cent(rome)re of kinetochore assembly and maintenance.

Authors:  Kristin C Scott
Journal:  Chromosome Res       Date:  2013-12       Impact factor: 5.239

Review 7.  Using human artificial chromosomes to study centromere assembly and function.

Authors:  Oscar Molina; Natalay Kouprina; Hiroshi Masumoto; Vladimir Larionov; William C Earnshaw
Journal:  Chromosoma       Date:  2017-07-07       Impact factor: 4.316

Review 8.  Critical histone post-translational modifications for centromere function and propagation.

Authors:  Tatsuo Fukagawa
Journal:  Cell Cycle       Date:  2017-06-09       Impact factor: 4.534

9.  Ccp1 Homodimer Mediates Chromatin Integrity by Antagonizing CENP-A Loading.

Authors:  Qianhua Dong; Feng-Xiang Yin; Feng Gao; Yuan Shen; Faben Zhang; Yang Li; Haijin He; Marlyn Gonzalez; Jinpu Yang; Shu Zhang; Min Su; Yu-Hang Chen; Fei Li
Journal:  Mol Cell       Date:  2016-09-22       Impact factor: 17.970

Review 10.  A new generation of human artificial chromosomes for functional genomics and gene therapy.

Authors:  Natalay Kouprina; William C Earnshaw; Hiroshi Masumoto; Vladimir Larionov
Journal:  Cell Mol Life Sci       Date:  2012-08-21       Impact factor: 9.261

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