Literature DB >> 23386923

Principles of Research Tissue Banking and Specimen Evaluation from the Pathologist's Perspective.

Sandra A McDonald1.   

Abstract

Human tissue biorepositories have an increasingly visible and important role within industrial enterprises in supporting biomedical research, including the rapidly advancing fields of proteomics, pharmacogenomics, and molecular epidemiology. Pathologists play a vital but often underrecognized role in the operation of these tissue banks. Besides interpreting studies that arise from banked samples, pathologists are needed to characterize tissues for research, to conduct quality assurance programs, to assist with resource allocation decisions, and to serve an educational role for investigators using the tissues. This article describes these key principles and illustrates examples where pathologist involvement is crucial to biorepository management. Of overarching importance, pathologists play a critical role in helping biorepository users understand the principles of specimen evaluation (histologic and structural composition of tissues, and their limitations) so as to optimize the scientific benefit of the tissues. In conclusion, greater involvement of pathologists in research tissue banking will enhance the scientific utility of biorepositories.

Entities:  

Year:  2010        PMID: 23386923      PMCID: PMC3562469          DOI: 10.1089/bio.2010.0018

Source DB:  PubMed          Journal:  Biopreserv Biobank        ISSN: 1947-5543            Impact factor:   2.300


  9 in total

1.  Frozen tumor tissue microarray technology for analysis of tumor RNA, DNA, and proteins.

Authors:  M Schoenberg Fejzo; D J Slamon
Journal:  Am J Pathol       Date:  2001-11       Impact factor: 4.307

Review 2.  Effect of fixatives and tissue processing on the content and integrity of nucleic acids.

Authors:  Mythily Srinivasan; Daniel Sedmak; Scott Jewell
Journal:  Am J Pathol       Date:  2002-12       Impact factor: 4.307

3.  Long-term preservation of antigenicity on tissue microarrays.

Authors:  Kyle A DiVito; Lori A Charette; David L Rimm; Robert L Camp
Journal:  Lab Invest       Date:  2004-08       Impact factor: 5.662

4.  Tissue ischemia time affects gene and protein expression patterns within minutes following surgical tumor excision.

Authors:  Annika Spruessel; Garnet Steimann; Mira Jung; Sung A Lee; Theresa Carr; Anne-Kristin Fentz; Joerg Spangenberg; Carsten Zornig; Hartmut H Juhl; Kerstin A David
Journal:  Biotechniques       Date:  2004-06       Impact factor: 1.993

5.  Laser capture microdissection.

Authors:  M R Emmert-Buck; R F Bonner; P D Smith; R F Chuaqui; Z Zhuang; S R Goldstein; R A Weiss; L A Liotta
Journal:  Science       Date:  1996-11-08       Impact factor: 47.728

6.  Laser capture microdissection analysis of gene expression in macrophages from atherosclerotic lesions of apolipoprotein E-deficient mice.

Authors:  Eugene Trogan; Robin P Choudhury; Hayes M Dansky; James X Rong; Jan L Breslow; Edward A Fisher
Journal:  Proc Natl Acad Sci U S A       Date:  2002-02-12       Impact factor: 11.205

7.  Biobanking of human pancreas cancer tissue: impact of ex-vivo procurement times on RNA quality.

Authors:  Udo Rudloff; Umesh Bhanot; William Gerald; David S Klimstra; William R Jarnagin; Murray F Brennan; Peter J Allen
Journal:  Ann Surg Oncol       Date:  2010-02-17       Impact factor: 5.344

8.  Loss of tumor marker-immunostaining intensity on stored paraffin slides of breast cancer.

Authors:  T W Jacobs; J E Prioleau; I E Stillman; S J Schnitt
Journal:  J Natl Cancer Inst       Date:  1996-08-07       Impact factor: 13.506

9.  Tissue microarrays for high-throughput molecular profiling of tumor specimens.

Authors:  J Kononen; L Bubendorf; A Kallioniemi; M Bärlund; P Schraml; S Leighton; J Torhorst; M J Mihatsch; G Sauter; O P Kallioniemi
Journal:  Nat Med       Date:  1998-07       Impact factor: 53.440

  9 in total
  8 in total

1.  Fee-for-service as a business model of growing importance: the academic biobank experience.

Authors:  Sandra A McDonald; Kara Sommerkamp; Maureen Egan-Palmer; Karen Kharasch; Victoria Holtschlag
Journal:  Biopreserv Biobank       Date:  2012-10       Impact factor: 2.300

2.  Automated Web-Based Request Mechanism for Workflow Enhancement in an Academic Customer-Focused Biorepository.

Authors:  Sandra A McDonald; Benjamin J Ryan; Amy Brink; Victoria L Holtschlag
Journal:  Biopreserv Biobank       Date:  2012-02       Impact factor: 2.300

3.  A new paradigm for biospecimen banking in the personalized medicine era.

Authors:  Sandra A McDonald; Mark A Watson; Joan Rossi; Colleen M Becker; David P Jaques; John D Pfeifer
Journal:  Am J Clin Pathol       Date:  2011-11       Impact factor: 2.493

Review 4.  Comprehensive genomic studies: emerging regulatory, strategic, and quality assurance challenges for biorepositories.

Authors:  Sandra A McDonald; Elaine R Mardis; David Ota; Mark A Watson; John D Pfeifer; Jonathan M Green
Journal:  Am J Clin Pathol       Date:  2012-07       Impact factor: 2.493

5.  Procurement of Human Tissues for Research Banking in the Surgical Pathology Laboratory: Prioritization Practices at Washington University Medical Center.

Authors:  Sandra A McDonald; Rebecca D Chernock; Tracey A Leach; Ajaz A Kahn; James H Yip; Joan Rossi; John D Pfeifer
Journal:  Biopreserv Biobank       Date:  2011-09       Impact factor: 2.300

6.  Digital pathology and image analysis augment biospecimen annotation and biobank quality assurance harmonization.

Authors:  Bih-Rong Wei; R Mark Simpson
Journal:  Clin Biochem       Date:  2013-12-18       Impact factor: 3.281

Review 7.  Let Archived Paraffin Blocks Be Utilized for Research with Waiver of Informed Consent.

Authors:  Yong-Jin Kim; Jeong Sik Park; Karam Ko; Chang Rok Jeong
Journal:  J Pathol Transl Med       Date:  2018-04-05

8.  Cancer oriented biobanks: A comprehensive review.

Authors:  Shankargouda Patil; Barnali Majumdar; Kamran Habib Awan; Gargi S Sarode; Sachin C Sarode; Amol R Gadbail; Shailesh Gondivkar
Journal:  Oncol Rev       Date:  2018-05-11
  8 in total

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