Literature DB >> 2334683

Structure of a thermostable disulfide-bridge mutant of phage T4 lysozyme shows that an engineered cross-link in a flexible region does not increase the rigidity of the folded protein.

P E Pjura1, M Matsumura, J A Wozniak, B W Matthews.   

Abstract

A disulfide bond introduced between amino acid positions 9 and 164 in phage T4 lysozyme has been shown to significantly increase the stability of the enzyme toward thermal denaturation [Matsumura, M., Becktel, W.J., Levitt, M., & Matthews, B. W. (1989) Proc. Natl. Acad. Sci. U.S.A. 86, 6562-6566]. To elucidate the structural features of the engineered disulfide, the crystal structure of the disulfide mutant has been determined at 1.8-A resolution. Residue 9 lies in the N-terminal alpha-helix, while residue 164 is located at the extreme C terminus of T4 lysozyme, which is the most mobile part of the molecule. The refined structure shows that the formation of the disulfide bond is accompanied by relatively large (approximately 2.5 A) localized shifts in C-terminal main-chain atoms. Comparison of the geometry of the engineered disulfide with those of naturally observed disulfides in proteins shows that the engineered bridge adopts a left-handed spiral conformation with a typical set of dihedral angles and C alpha-C alpha distance. The geometry of the engineered disulfide suggests that it is slightly more strained than the disulfide of oxidized dithiothreitol but that the strain is within the range observed in naturally occurring disulfides. The wild-type and cross-linked lysozymes have very similar overall crystallographic temperature factors, indicating that the introduction of the disulfide bond does not impose rigidity on the folded protein structure. In particular, residues 162-164 retain high mobility in the mutant structure, consistent with the idea that stabilization of the protein is due to the effect of the disulfide cross-link on the unfolded rather than the folded state.(ABSTRACT TRUNCATED AT 250 WORDS)

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Year:  1990        PMID: 2334683     DOI: 10.1021/bi00462a023

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  20 in total

1.  Trapping a 96 degrees domain rotation in two distinct conformations by engineered disulfide bridges.

Authors:  Robert Schultz-Heienbrok; Timm Maier; Norbert Sträter
Journal:  Protein Sci       Date:  2004-07       Impact factor: 6.725

2.  Structure of a stabilizing disulfide bridge mutant that closes the active-site cleft of T4 lysozyme.

Authors:  R H Jacobson; M Matsumura; H R Faber; B W Matthews
Journal:  Protein Sci       Date:  1992-01       Impact factor: 6.725

3.  Folding and function of a T4 lysozyme containing 10 consecutive alanines illustrate the redundancy of information in an amino acid sequence.

Authors:  D W Heinz; W A Baase; B W Matthews
Journal:  Proc Natl Acad Sci U S A       Date:  1992-05-01       Impact factor: 11.205

4.  Dynamics and unfolding pathways of a hyperthermophilic and a mesophilic rubredoxin.

Authors:  T Lazaridis; I Lee; M Karplus
Journal:  Protein Sci       Date:  1997-12       Impact factor: 6.725

5.  Engineering of a thermo-alkali-stable lipase from Rhizopus chinensis by rational design of a buried disulfide bond and combinatorial mutagenesis.

Authors:  Rui Wang; Shang Wang; Yan Xu; Xiaowei Yu
Journal:  J Ind Microbiol Biotechnol       Date:  2020-10-18       Impact factor: 3.346

Review 6.  A review of protein engineering for the food industry.

Authors:  P W Goodenough
Journal:  Mol Biotechnol       Date:  1995-10       Impact factor: 2.695

7.  Response of dynamic structure to removal of a disulfide bond: normal mode refinement of C77A/C95A mutant of human lysozyme.

Authors:  A Kidera; K Inaka; M Matsushima; N Go
Journal:  Protein Sci       Date:  1994-01       Impact factor: 6.725

8.  Cys.sqlite: A Structured-Information Approach to the Comprehensive Analysis of Cysteine Disulfide Bonds in the Protein Databank.

Authors:  Theodore L Fobe; Andrei Kazakov; Demian Riccardi
Journal:  J Chem Inf Model       Date:  2019-02-15       Impact factor: 4.956

9.  Disulfide crosslinks to probe the structure and flexibility of a designed four-helix bundle protein.

Authors:  L Regan; A Rockwell; Z Wasserman; W DeGrado
Journal:  Protein Sci       Date:  1994-12       Impact factor: 6.725

10.  Delineation of an evolutionary salvage pathway by compensatory mutations of a defective lysozyme.

Authors:  M Jucovic; A R Poteete
Journal:  Protein Sci       Date:  1998-10       Impact factor: 6.725

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