Literature DB >> 23324605

U1 snRNP-mediated poly(A) site suppression: beneficial and deleterious for mRNA fate.

Jörg Langemeier1, Maximilian Radtke, Jens Bohne.   

Abstract

The spliceosomal component U1snRNP commits pre-mRNAs to the splicing pathway. Recently, a nuclear RNA surveillance function has been ascribed to U1, namely the suppression of intronic polyadenylation sites. This surveillance holds regulatory potential as it alters the 3' ends of certain receptor tyrosine kinase mRNAs. However, suppression of 3' end processing by U1 snRNP is also the cause of a severe genetic disorder. We described a 3'UTR point mutation creating a 5'SS leading to U1-mediated suppression of 3' end formation. Thus, the inhibitory function of U1 is both beneficial and deleterious where misled. The exact mechanism of how U1 interferes with 3' end processing remains unclear. According to our data, U1 snRNP already interferes with cleavage or poly(A) site selection instead of directly inhibiting poly(A) polymerase as previously assumed. Here, we present alternative models for U1-mediated poly(A) site suppression and discuss the implications for RNA quality control and disease-related mutations.

Entities:  

Keywords:  3′ UTR; RNA processing; U1 site; genetic disease; polyadenylation

Mesh:

Substances:

Year:  2013        PMID: 23324605      PMCID: PMC3594276          DOI: 10.4161/rna.23314

Source DB:  PubMed          Journal:  RNA Biol        ISSN: 1547-6286            Impact factor:   4.652


  31 in total

1.  Position-dependent inhibition of the cleavage step of pre-mRNA 3'-end processing by U1 snRNP.

Authors:  S Vagner; U Rüegsegger; S I Gunderson; W Keller; I W Mattaj
Journal:  RNA       Date:  2000-02       Impact factor: 4.942

Review 2.  Strange bedfellows: polyadenylation factors at the promoter.

Authors:  Olga Calvo; James L Manley
Journal:  Genes Dev       Date:  2003-06-01       Impact factor: 11.361

3.  U1 snRNP inhibits pre-mRNA polyadenylation through a direct interaction between U1 70K and poly(A) polymerase.

Authors:  S I Gunderson; M Polycarpou-Schwarz; I W Mattaj
Journal:  Mol Cell       Date:  1998-01       Impact factor: 17.970

Review 4.  Mechanism and regulation of mRNA polyadenylation.

Authors:  D F Colgan; J L Manley
Journal:  Genes Dev       Date:  1997-11-01       Impact factor: 11.361

5.  The HIV-1 5' LTR poly(A) site is inactivated by U1 snRNP interaction with the downstream major splice donor site.

Authors:  M P Ashe; L H Pearson; N J Proudfoot
Journal:  EMBO J       Date:  1997-09-15       Impact factor: 11.598

Review 6.  Alternative polyadenylation: new insights from global analyses.

Authors:  Yongsheng Shi
Journal:  RNA       Date:  2012-10-24       Impact factor: 4.942

7.  A small nuclear ribonucleoprotein is required for splicing of adenoviral early RNA sequences.

Authors:  V W Yang; M R Lerner; J A Steitz; S J Flint
Journal:  Proc Natl Acad Sci U S A       Date:  1981-03       Impact factor: 11.205

8.  Analysis of the stimulatory effect of splicing on mRNA production and utilization in mammalian cells.

Authors:  Shihua Lu; Bryan R Cullen
Journal:  RNA       Date:  2003-05       Impact factor: 4.942

9.  An element in the bovine papillomavirus late 3' untranslated region reduces polyadenylated cytoplasmic RNA levels.

Authors:  P A Furth; C C Baker
Journal:  J Virol       Date:  1991-11       Impact factor: 5.103

10.  Sequences homologous to 5' splice sites are required for the inhibitory activity of papillomavirus late 3' untranslated regions.

Authors:  P A Furth; W T Choe; J H Rex; J C Byrne; C C Baker
Journal:  Mol Cell Biol       Date:  1994-08       Impact factor: 4.272

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  8 in total

Review 1.  A day in the life of the spliceosome.

Authors:  A Gregory Matera; Zefeng Wang
Journal:  Nat Rev Mol Cell Biol       Date:  2014-02       Impact factor: 94.444

2.  Suboptimal RNA-RNA interaction limits U1 snRNP inhibition of canonical mRNA 3' processing.

Authors:  Junjie Shi; Yanhui Deng; Shanshan Huang; Chunliu Huang; Jinkai Wang; Andy Peng Xiang; Chengguo Yao
Journal:  RNA Biol       Date:  2019-07-07       Impact factor: 4.652

3.  Protein phosphatase 2A family members (PP2A and PP6) associate with U1 snRNP and the spliceosome during pre-mRNA splicing.

Authors:  Malek Kamoun; Mohammed Filali; Michael V Murray; Sita Awasthi; Brian E Wadzinski
Journal:  Biochem Biophys Res Commun       Date:  2013-09-21       Impact factor: 3.575

4.  Cauliflower mosaic virus Transcriptome Reveals a Complex Alternative Splicing Pattern.

Authors:  Clément Bouton; Angèle Geldreich; Laëtitia Ramel; Lyubov A Ryabova; Maria Dimitrova; Mario Keller
Journal:  PLoS One       Date:  2015-07-10       Impact factor: 3.240

5.  Competition within Introns: Splicing Wins over Polyadenylation via a General Mechanism.

Authors:  M Tikhonov; P Georgiev; O Maksimenko
Journal:  Acta Naturae       Date:  2013-10       Impact factor: 1.845

6.  Exploring the Impact of Cleavage and Polyadenylation Factors on Pre-mRNA Splicing Across Eukaryotes.

Authors:  Gildas Lepennetier; Francesco Catania
Journal:  G3 (Bethesda)       Date:  2017-07-05       Impact factor: 3.154

7.  A conserved role for the ALS-linked splicing factor SFPQ in repression of pathogenic cryptic last exons.

Authors:  Patricia M Gordon; Fursham Hamid; Eugene V Makeyev; Corinne Houart
Journal:  Nat Commun       Date:  2021-03-26       Impact factor: 14.919

8.  Pathological mechanism and antisense oligonucleotide-mediated rescue of a non-coding variant suppressing factor 9 RNA biogenesis leading to hemophilia B.

Authors:  Simon Krooss; Sonja Werwitzke; Johannes Kopp; Alice Rovai; Dirk Varnholt; Amelie S Wachs; Aurelie Goyenvalle; Annemieke Aarstma-Rus; Michael Ott; Andreas Tiede; Jörg Langemeier; Jens Bohne
Journal:  PLoS Genet       Date:  2020-04-08       Impact factor: 5.917

  8 in total

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