Literature DB >> 24452469

A day in the life of the spliceosome.

A Gregory Matera1, Zefeng Wang2.   

Abstract

One of the most amazing findings in molecular biology was the discovery that eukaryotic genes are discontinuous, with coding DNA being interrupted by stretches of non-coding sequence. The subsequent realization that the intervening regions are removed from pre-mRNA transcripts via the activity of a common set of small nuclear RNAs (snRNAs), which assemble together with associated proteins into a complex known as the spliceosome, was equally surprising. How do cells coordinate the assembly of this molecular machine? And how does the spliceosome accurately recognize exons and introns to carry out the splicing reaction? Insights into these questions have been gained by studying the life cycle of spliceosomal snRNAs from their transcription, nuclear export and re-import to their dynamic assembly into the spliceosome. This assembly process can also affect the regulation of alternative splicing and has implications for human disease.

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Year:  2014        PMID: 24452469      PMCID: PMC4060434          DOI: 10.1038/nrm3742

Source DB:  PubMed          Journal:  Nat Rev Mol Cell Biol        ISSN: 1471-0072            Impact factor:   94.444


  203 in total

1.  hnRNP C tetramer measures RNA length to classify RNA polymerase II transcripts for export.

Authors:  Asako McCloskey; Ichiro Taniguchi; Kaori Shinmyozu; Mutsuhito Ohno
Journal:  Science       Date:  2012-03-30       Impact factor: 47.728

2.  RNA secondary structure in mutually exclusive splicing.

Authors:  Yun Yang; Leilei Zhan; Wenjing Zhang; Feng Sun; Wenfeng Wang; Nan Tian; Jingpei Bi; Haitao Wang; Dike Shi; Yajian Jiang; Yaozhou Zhang; Yongfeng Jin
Journal:  Nat Struct Mol Biol       Date:  2011-01-09       Impact factor: 15.369

3.  G triplets located throughout a class of small vertebrate introns enforce intron borders and regulate splice site selection.

Authors:  A J McCullough; S M Berget
Journal:  Mol Cell Biol       Date:  1997-08       Impact factor: 4.272

4.  Formation of the 3' end of U1 snRNA requires compatible snRNA promoter elements.

Authors:  N Hernandez; A M Weiner
Journal:  Cell       Date:  1986-10-24       Impact factor: 41.582

Review 5.  New connections between splicing and human disease.

Authors:  Richard A Padgett
Journal:  Trends Genet       Date:  2012-03-05       Impact factor: 11.639

6.  Are snRNPs involved in splicing?

Authors:  M R Lerner; J A Boyle; S M Mount; S L Wolin; J A Steitz
Journal:  Nature       Date:  1980-01-10       Impact factor: 49.962

7.  Essential role for the tudor domain of SMN in spliceosomal U snRNP assembly: implications for spinal muscular atrophy.

Authors:  D Bühler; V Raker; R Lührmann; U Fischer
Journal:  Hum Mol Genet       Date:  1999-12       Impact factor: 6.150

8.  Cajal body surveillance of U snRNA export complex assembly.

Authors:  Tatsuya Suzuki; Hiroto Izumi; Mutsuhito Ohno
Journal:  J Cell Biol       Date:  2010-08-23       Impact factor: 10.539

9.  Spliced segments at the 5' terminus of adenovirus 2 late mRNA.

Authors:  S M Berget; C Moore; P A Sharp
Journal:  Proc Natl Acad Sci U S A       Date:  1977-08       Impact factor: 11.205

10.  An RNA architectural locus control region involved in Dscam mutually exclusive splicing.

Authors:  Xuebin Wang; Guoli Li; Yun Yang; Wenfeng Wang; Wenjing Zhang; Huawei Pan; Peng Zhang; Yuan Yue; Hao Lin; Baoping Liu; Jingpei Bi; Feng Shi; Jinping Mao; Yijun Meng; Leilei Zhan; Yongfeng Jin
Journal:  Nat Commun       Date:  2012       Impact factor: 14.919

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  374 in total

1.  Design, Synthesis, and Properties of Phosphoramidate 2',5'-Linked Branched RNA: Toward the Rational Design of Inhibitors of the RNA Lariat Debranching Enzyme.

Authors:  Nobuhiro Tago; Adam Katolik; Nathaniel E Clark; Eric J Montemayor; Kohji Seio; Mitsuo Sekine; P John Hart; Masad J Damha
Journal:  J Org Chem       Date:  2015-09-30       Impact factor: 4.354

Review 2.  The pathogenicity of splicing defects: mechanistic insights into pre-mRNA processing inform novel therapeutic approaches.

Authors:  Elisabeth Daguenet; Gwendal Dujardin; Juan Valcárcel
Journal:  EMBO Rep       Date:  2015-11-13       Impact factor: 8.807

3.  U6 snRNA intron insertion occurred multiple times during fungi evolution.

Authors:  Sebastian Canzler; Peter F Stadler; Jana Hertel
Journal:  RNA Biol       Date:  2016       Impact factor: 4.652

4.  SPSB1-mediated HnRNP A1 ubiquitylation regulates alternative splicing and cell migration in EGF signaling.

Authors:  Feng Wang; Xing Fu; Peng Chen; Ping Wu; Xiaojuan Fan; Na Li; Hong Zhu; Ting-Ting Jia; Hongbin Ji; Zefeng Wang; Catherine C L Wong; Ronggui Hu; Jingyi Hui
Journal:  Cell Res       Date:  2017-01-13       Impact factor: 25.617

5.  New twists on long noncoding RNAs: from mobile elements to motile cancer cells.

Authors:  Tuan M Nguyen; Sumayya Alchalabi; Adewunmi Oluwatoyosi; Ali S Ropri; Jason I Herschkowitz; Jeffrey M Rosen
Journal:  RNA Biol       Date:  2020-06-10       Impact factor: 4.652

6.  Engineering Artificial Factors to Specifically Manipulate Alternative Splicing in Human Cells.

Authors:  Huan-Huan Wei; Yuanlong Liu; Yang Wang; Qianyun Lu; Xuerong Yang; Jiefu Li; Zefeng Wang
Journal:  J Vis Exp       Date:  2017-04-26       Impact factor: 1.355

7.  Transcriptome Engineering with RNA-Targeting Type VI-D CRISPR Effectors.

Authors:  Silvana Konermann; Peter Lotfy; Nicholas J Brideau; Jennifer Oki; Maxim N Shokhirev; Patrick D Hsu
Journal:  Cell       Date:  2018-03-15       Impact factor: 41.582

Review 8.  Faulty RNA splicing: consequences and therapeutic opportunities in brain and muscle disorders.

Authors:  Vittoria Pagliarini; Piergiorgio La Rosa; Claudio Sette
Journal:  Hum Genet       Date:  2017-04-22       Impact factor: 4.132

Review 9.  Characterizing excited conformational states of RNA by NMR spectroscopy.

Authors:  Bo Zhao; Qi Zhang
Journal:  Curr Opin Struct Biol       Date:  2015-03-10       Impact factor: 6.809

10.  Influenza virus mRNA trafficking through host nuclear speckles.

Authors:  Amir Mor; Alexander White; Ke Zhang; Matthew Thompson; Matthew Esparza; Raquel Muñoz-Moreno; Kazunori Koide; Kristen W Lynch; Adolfo García-Sastre; Beatriz M A Fontoura
Journal:  Nat Microbiol       Date:  2016-05-27       Impact factor: 17.745

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