Literature DB >> 23294727

Current and emerging technology approaches in genomics.

Yvette P Conley1, Leslie G Biesecker, Stephen Gonsalves, Carrie J Merkle, Maggie Kirk, Bradley E Aouizerat.   

Abstract

PURPOSE: To introduce current and emerging approaches that are being utilized in the field of genomics so the reader can conceptually evaluate the literature and appreciate how these approaches are advancing our understanding of health-related issues. ORGANIZING CONSTRUCT: Each approach is described and includes information related to how it is advancing research, its potential clinical utility, exemplars of current uses, challenges related to technologies used for these approaches, and when appropriate information related to understanding the evidence base for clinical utilization of each approach is provided. Web-based resources are included for the reader who would like more in-depth information and to provide opportunity to stay up to date with these approaches and their utility.
CONCLUSIONS: The chosen approaches-genome sequencing, genome-wide association studies, epigenomics, and gene expression-are extremely valuable approaches for collecting research data to help us better understand the pathophysiology of a variety of health-related conditions, but they are also gaining in utility for clinical assessment and testing purposes. CLINICAL RELEVANCE: Our increased understanding of the molecular underpinnings of disease will assist with better development of screening tests, diagnostic tests, tests that allow us to prognosticate, tests that allow for individualized treatments, and tests to facilitate post-treatment surveillance. No claim to original US government works.

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Year:  2013        PMID: 23294727      PMCID: PMC3773704          DOI: 10.1111/jnu.12001

Source DB:  PubMed          Journal:  J Nurs Scholarsh        ISSN: 1527-6546            Impact factor:   3.176


  41 in total

Review 1.  The history of cancer epigenetics.

Authors:  Andrew P Feinberg; Benjamin Tycko
Journal:  Nat Rev Cancer       Date:  2004-02       Impact factor: 60.716

2.  Strategies to prepare faculty to integrate genomics into nursing education programs.

Authors:  Janet K Williams; Cynthia A Prows; Yvette P Conley; Julie Eggert; Maggie Kirk; Francine Nichols
Journal:  J Nurs Scholarsh       Date:  2011-07-18       Impact factor: 3.176

Review 3.  What can exome sequencing do for you?

Authors:  Jacek Majewski; Jeremy Schwartzentruber; Emilie Lalonde; Alexandre Montpetit; Nada Jabado
Journal:  J Med Genet       Date:  2011-07-05       Impact factor: 6.318

Review 4.  Molecular genomic research designs.

Authors:  Kelley Baumgartel; Jamie Zelazny; Theresa Timcheck; Chantel Snyder; Mandy Bell; Yvette P Conley
Journal:  Annu Rev Nurs Res       Date:  2011

Review 5.  Next-generation sequencing and its applications in molecular diagnostics.

Authors:  Zhenqiang Su; Baitang Ning; Hong Fang; Huixiao Hong; Roger Perkins; Weida Tong; Leming Shi
Journal:  Expert Rev Mol Diagn       Date:  2011-04       Impact factor: 5.225

Review 6.  New DNA sequencing technologies open a promising era for cancer research and treatment.

Authors:  Leandro Sastre
Journal:  Clin Transl Oncol       Date:  2011-05       Impact factor: 3.405

Review 7.  Gene expression profiling in breast cancer: classification, prognostication, and prediction.

Authors:  Jorge S Reis-Filho; Lajos Pusztai
Journal:  Lancet       Date:  2011-11-19       Impact factor: 79.321

Review 8.  Discovering genotypes underlying human phenotypes: past successes for mendelian disease, future approaches for complex disease.

Authors:  David Botstein; Neil Risch
Journal:  Nat Genet       Date:  2003-03       Impact factor: 38.330

9.  The ClinSeq Project: piloting large-scale genome sequencing for research in genomic medicine.

Authors:  Leslie G Biesecker; James C Mullikin; Flavia M Facio; Clesson Turner; Praveen F Cherukuri; Robert W Blakesley; Gerard G Bouffard; Peter S Chines; Pedro Cruz; Nancy F Hansen; Jamie K Teer; Baishali Maskeri; Alice C Young; Teri A Manolio; Alexander F Wilson; Toren Finkel; Paul Hwang; Andrew Arai; Alan T Remaley; Vandana Sachdev; Robert Shamburek; Richard O Cannon; Eric D Green
Journal:  Genome Res       Date:  2009-07-14       Impact factor: 9.043

10.  Genome-wide DNA methylation profiling of CpG islands in breast cancer identifies novel genes associated with tumorigenicity.

Authors:  Victoria K Hill; Christopher Ricketts; Ivan Bieche; Sophie Vacher; Dean Gentle; Cheryl Lewis; Eamonn R Maher; Farida Latif
Journal:  Cancer Res       Date:  2011-03-01       Impact factor: 12.701

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  7 in total

1.  Symptom Science: Repurposing Existing Omics Data.

Authors:  Nicole D Osier; Christopher C Imes; Heba Khalil; Jamie Zelazny; Ann E Johansson; Yvette P Conley
Journal:  Biol Res Nurs       Date:  2016-09-20       Impact factor: 2.522

2.  Educating future nursing scientists: Recommendations for integrating omics content in PhD programs.

Authors:  Yvette P Conley; Margaret Heitkemper; Donna McCarthy; Cindy M Anderson; Elizabeth J Corwin; Sandra Daack-Hirsch; Susan G Dorsey; Katherine E Gregory; Maureen W Groer; Susan J Henly; Timothy Landers; Debra E Lyon; Jacquelyn Y Taylor; Joachim Voss
Journal:  Nurs Outlook       Date:  2015-06-12       Impact factor: 3.250

Review 3.  An overview of epigenetics in nursing.

Authors:  Ashley Erin Clark; Maria Adamian; Jacquelyn Y Taylor
Journal:  Nurs Clin North Am       Date:  2013-11-01       Impact factor: 1.208

Review 4.  Proposed mechanisms for cancer- and treatment-related cognitive changes.

Authors:  John D Merriman; Diane Von Ah; Christine Miaskowski; Bradley E Aouizerat
Journal:  Semin Oncol Nurs       Date:  2013-11       Impact factor: 2.315

5.  Understanding Genomic Knowledge in Rural Appalachia: The West Virginia Genome Community Project.

Authors:  Jennifer A Mallow; Laurie A Theeke; Patricia Crawford; Elizabeth Prendergast; Chuck Conner; Tony Richards; Barbara McKown; Donna Bush; Donald Reed; Meagan E Stabler; Jianjun Zhang; Geri Dino; Taura L Barr
Journal:  Online J Rural Nurs Health Care       Date:  2016

Review 6.  African Swine Fever Virus (ASFV): Biology, Genomics and Genotypes Circulating in Sub-Saharan Africa.

Authors:  Emma P Njau; Eunice M Machuka; Sarah Cleaveland; Gabriel M Shirima; Lughano J Kusiluka; Edward A Okoth; Roger Pelle
Journal:  Viruses       Date:  2021-11-15       Impact factor: 5.048

7.  The first genotype II African swine fever virus isolated in Africa provides insight into the current Eurasian pandemic.

Authors:  Emma P Njau; Jean-Baka Domelevo Entfellner; Eunice M Machuka; Edwina N Bochere; Sarah Cleaveland; Gabriel M Shirima; Lughano J Kusiluka; Chris Upton; Richard P Bishop; Roger Pelle; Edward A Okoth
Journal:  Sci Rep       Date:  2021-06-22       Impact factor: 4.379

  7 in total

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