| Literature DB >> 23284520 |
Sema Oztürk Yildirim1, Ray J Butcher, Yavuz Köysal, Esen Nur Kantar, Ayşe Belder.
Abstract
The title compound, C(16)H(19)N(3)O(4)S, is almost planar, with a dihedral angle of 2.88 (9)° between the mean planes of the benzene and thia-zole rings. The mol-ecule adopts an E conformation about the two C=N bonds, with a C-N-N-C torsion angle of -177.01 (11)°. An intra-molecular C-H⋯O hydrogen bond exists between a thia-zole methyl group and the formic acid ethyl ester carbonyl O atom. In the crystal, mol-ecules are linked by O--H⋯O hydrogen bonds, forming chains propagating along [2-10]. The chains are linked via C-H⋯O hydrogen bonds with R(2) (2)(12) ring motifs, forming sheets lying parallel to (12-2). The sheets are further linked through out-of-plane C-H⋯N hydrogen bonds with R(2) (2)(12) ring motifs and C-H⋯π inter-actions, forming an inter-esting three-dimensional supra-molecular architecture.Entities:
Year: 2012 PMID: 23284520 PMCID: PMC3515300 DOI: 10.1107/S1600536812043772
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C16H19N3O4S | |
| Triclinic, | |
| Hall symbol: -P 1 | Cu |
| Cell parameters from 4259 reflections | |
| θ = 3.6–75.0° | |
| µ = 1.96 mm−1 | |
| α = 74.843 (4)° | |
| β = 87.579 (4)° | Block, yellow |
| γ = 73.304 (4)° | 0.40 × 0.35 × 0.30 mm |
| Agilent Xcalibur (Ruby, Gemini) diffractometer | 3316 independent reflections |
| Radiation source: Enhance (Cu) X-ray Source | 3254 reflections with |
| Graphite monochromator | |
| Detector resolution: 10.5081 pixels mm-1 | θmax = 75.2°, θmin = 3.6° |
| ω scans | |
| Absorption correction: multi-scan ( | |
| 5272 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 3316 reflections | (Δ/σ)max < 0.001 |
| 222 parameters | Δρmax = 0.35 e Å−3 |
| 0 restraints | Δρmin = −0.29 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| S1 | 0.70492 (5) | 0.40814 (3) | 0.24740 (3) | 0.02041 (12) | |
| N1 | 0.66196 (18) | 0.27633 (12) | 0.10704 (9) | 0.0211 (3) | |
| N2 | 0.36294 (18) | 0.44474 (12) | 0.12687 (9) | 0.0215 (2) | |
| N3 | 0.28500 (18) | 0.54591 (12) | 0.18464 (9) | 0.0209 (2) | |
| O1 | 1.09737 (14) | 0.30755 (10) | 0.35164 (8) | 0.0228 (2) | |
| O2 | 1.25414 (15) | 0.14195 (11) | 0.26529 (9) | 0.0262 (2) | |
| O3 | 0.01284 (15) | 0.91719 (11) | 0.41058 (8) | 0.0250 (2) | |
| O4 | −0.36639 (15) | 1.02884 (11) | 0.35124 (9) | 0.0260 (2) | |
| H4O | −0.4861 | 1.0602 | 0.3258 | 0.031* | |
| C1 | 0.5524 (2) | 0.38117 (14) | 0.15329 (11) | 0.0197 (3) | |
| C2 | 0.8616 (2) | 0.21847 (14) | 0.14284 (11) | 0.0209 (3) | |
| C3 | 0.9110 (2) | 0.27517 (14) | 0.21950 (11) | 0.0207 (3) | |
| C4 | 1.1041 (2) | 0.23365 (14) | 0.27913 (11) | 0.0209 (3) | |
| C5 | 1.2838 (2) | 0.27620 (15) | 0.41589 (11) | 0.0229 (3) | |
| H5A | 1.3993 | 0.2794 | 0.3674 | 0.027* | |
| H5B | 1.3131 | 0.1810 | 0.4664 | 0.027* | |
| C6 | 1.2533 (2) | 0.38483 (16) | 0.47858 (12) | 0.0277 (3) | |
| H6A | 1.3767 | 0.3671 | 0.5220 | 0.042* | |
| H6B | 1.1399 | 0.3799 | 0.5270 | 0.042* | |
| H6C | 1.2234 | 0.4786 | 0.4278 | 0.042* | |
| C7 | 0.9959 (2) | 0.10729 (15) | 0.09540 (12) | 0.0256 (3) | |
| H7A | 1.1327 | 0.0781 | 0.1283 | 0.038* | |
| H7B | 1.0011 | 0.1449 | 0.0165 | 0.038* | |
| H7C | 0.9421 | 0.0260 | 0.1102 | 0.038* | |
| C8 | 0.5613 (2) | 0.23358 (15) | 0.02873 (12) | 0.0250 (3) | |
| H8A | 0.4387 | 0.2114 | 0.0602 | 0.037* | |
| H8B | 0.6532 | 0.1502 | 0.0113 | 0.037* | |
| H8C | 0.5243 | 0.3105 | −0.0379 | 0.037* | |
| C9 | 0.0948 (2) | 0.60606 (14) | 0.16368 (11) | 0.0211 (3) | |
| H9A | 0.0275 | 0.5778 | 0.1138 | 0.025* | |
| C10 | −0.0221 (2) | 0.71595 (14) | 0.21327 (11) | 0.0205 (3) | |
| C11 | 0.0644 (2) | 0.76348 (14) | 0.28849 (11) | 0.0199 (3) | |
| H11A | 0.2047 | 0.7247 | 0.3077 | 0.024* | |
| C12 | −0.0528 (2) | 0.86614 (14) | 0.33475 (11) | 0.0206 (3) | |
| C13 | −0.2607 (2) | 0.92734 (14) | 0.30389 (11) | 0.0208 (3) | |
| C14 | −0.3465 (2) | 0.88063 (15) | 0.22958 (11) | 0.0228 (3) | |
| H14A | −0.4862 | 0.9207 | 0.2091 | 0.027* | |
| C15 | −0.2279 (2) | 0.77488 (15) | 0.18495 (11) | 0.0231 (3) | |
| H15A | −0.2880 | 0.7426 | 0.1347 | 0.028* | |
| C16 | 0.2148 (2) | 0.84763 (16) | 0.45449 (12) | 0.0271 (3) | |
| H16A | 0.2424 | 0.8898 | 0.5108 | 0.041* | |
| H16B | 0.3111 | 0.8580 | 0.3963 | 0.041* | |
| H16C | 0.2290 | 0.7475 | 0.4864 | 0.041* |
| S1 | 0.01519 (18) | 0.02052 (19) | 0.02471 (19) | −0.00053 (13) | −0.00105 (12) | −0.00933 (13) |
| N1 | 0.0198 (6) | 0.0202 (6) | 0.0223 (5) | −0.0022 (5) | −0.0005 (4) | −0.0073 (4) |
| N2 | 0.0189 (6) | 0.0207 (6) | 0.0236 (6) | −0.0022 (4) | −0.0011 (4) | −0.0073 (4) |
| N3 | 0.0190 (6) | 0.0203 (6) | 0.0219 (5) | −0.0023 (5) | 0.0000 (4) | −0.0068 (4) |
| O1 | 0.0151 (5) | 0.0248 (5) | 0.0263 (5) | −0.0009 (4) | −0.0017 (4) | −0.0079 (4) |
| O2 | 0.0169 (5) | 0.0255 (5) | 0.0330 (5) | 0.0010 (4) | −0.0016 (4) | −0.0095 (4) |
| O3 | 0.0170 (5) | 0.0275 (5) | 0.0296 (5) | 0.0007 (4) | −0.0047 (4) | −0.0131 (4) |
| O4 | 0.0167 (5) | 0.0278 (5) | 0.0314 (5) | 0.0023 (4) | −0.0019 (4) | −0.0135 (4) |
| C1 | 0.0195 (7) | 0.0189 (6) | 0.0201 (6) | −0.0043 (5) | 0.0003 (5) | −0.0052 (5) |
| C2 | 0.0188 (6) | 0.0182 (6) | 0.0226 (6) | −0.0026 (5) | 0.0023 (5) | −0.0030 (5) |
| C3 | 0.0160 (6) | 0.0184 (6) | 0.0247 (6) | −0.0005 (5) | 0.0024 (5) | −0.0053 (5) |
| C4 | 0.0167 (6) | 0.0191 (6) | 0.0239 (6) | −0.0030 (5) | 0.0017 (5) | −0.0027 (5) |
| C5 | 0.0150 (6) | 0.0254 (7) | 0.0250 (7) | −0.0018 (5) | −0.0026 (5) | −0.0049 (5) |
| C6 | 0.0235 (7) | 0.0273 (7) | 0.0301 (7) | −0.0027 (6) | −0.0025 (6) | −0.0080 (6) |
| C7 | 0.0248 (7) | 0.0225 (7) | 0.0268 (7) | −0.0009 (6) | 0.0038 (6) | −0.0087 (5) |
| C8 | 0.0240 (7) | 0.0251 (7) | 0.0264 (7) | −0.0039 (6) | −0.0019 (6) | −0.0110 (6) |
| C9 | 0.0200 (7) | 0.0211 (6) | 0.0213 (6) | −0.0048 (5) | −0.0014 (5) | −0.0049 (5) |
| C10 | 0.0181 (7) | 0.0196 (6) | 0.0210 (6) | −0.0028 (5) | 0.0003 (5) | −0.0033 (5) |
| C11 | 0.0143 (6) | 0.0200 (6) | 0.0219 (6) | −0.0019 (5) | −0.0008 (5) | −0.0027 (5) |
| C12 | 0.0192 (7) | 0.0213 (6) | 0.0197 (6) | −0.0049 (5) | −0.0004 (5) | −0.0037 (5) |
| C13 | 0.0176 (6) | 0.0201 (6) | 0.0215 (6) | −0.0019 (5) | 0.0017 (5) | −0.0041 (5) |
| C14 | 0.0146 (6) | 0.0251 (7) | 0.0255 (7) | −0.0012 (5) | −0.0022 (5) | −0.0055 (5) |
| C15 | 0.0195 (7) | 0.0248 (7) | 0.0244 (7) | −0.0038 (5) | −0.0025 (5) | −0.0075 (5) |
| C16 | 0.0189 (7) | 0.0310 (7) | 0.0303 (7) | −0.0010 (6) | −0.0062 (6) | −0.0121 (6) |
| S1—C1 | 1.7507 (14) | C6—H6B | 0.9800 |
| S1—C3 | 1.7626 (14) | C6—H6C | 0.9800 |
| N1—C2 | 1.3773 (18) | C7—H7A | 0.9800 |
| N1—C1 | 1.3795 (18) | C7—H7B | 0.9800 |
| N1—C8 | 1.4599 (17) | C7—H7C | 0.9800 |
| N2—C1 | 1.2958 (18) | C8—H8A | 0.9800 |
| N2—N3 | 1.3982 (16) | C8—H8B | 0.9800 |
| N3—C9 | 1.2847 (18) | C8—H8C | 0.9800 |
| O1—C4 | 1.3315 (17) | C9—C10 | 1.4592 (19) |
| O1—C5 | 1.4624 (16) | C9—H9A | 0.9500 |
| O2—C4 | 1.2247 (17) | C10—C15 | 1.3951 (19) |
| O3—C12 | 1.3601 (17) | C10—C11 | 1.4039 (19) |
| O3—C16 | 1.4307 (16) | C11—C12 | 1.3808 (19) |
| O4—C13 | 1.3551 (17) | C11—H11A | 0.9500 |
| O4—H4O | 0.8400 | C12—C13 | 1.4159 (19) |
| C2—C3 | 1.359 (2) | C13—C14 | 1.387 (2) |
| C2—C7 | 1.4941 (19) | C14—C15 | 1.394 (2) |
| C3—C4 | 1.457 (2) | C14—H14A | 0.9500 |
| C5—C6 | 1.498 (2) | C15—H15A | 0.9500 |
| C5—H5A | 0.9900 | C16—H16A | 0.9800 |
| C5—H5B | 0.9900 | C16—H16B | 0.9800 |
| C6—H6A | 0.9800 | C16—H16C | 0.9800 |
| C1—S1—C3 | 89.88 (6) | C2—C7—H7C | 109.5 |
| C2—N1—C1 | 114.90 (11) | H7A—C7—H7C | 109.5 |
| C2—N1—C8 | 125.69 (12) | H7B—C7—H7C | 109.5 |
| C1—N1—C8 | 119.40 (11) | N1—C8—H8A | 109.5 |
| C1—N2—N3 | 110.82 (11) | N1—C8—H8B | 109.5 |
| C9—N3—N2 | 112.08 (11) | H8A—C8—H8B | 109.5 |
| C4—O1—C5 | 116.48 (11) | N1—C8—H8C | 109.5 |
| C12—O3—C16 | 116.76 (11) | H8A—C8—H8C | 109.5 |
| C13—O4—H4O | 109.5 | H8B—C8—H8C | 109.5 |
| N2—C1—N1 | 121.36 (12) | N3—C9—C10 | 122.79 (13) |
| N2—C1—S1 | 128.22 (11) | N3—C9—H9A | 118.6 |
| N1—C1—S1 | 110.42 (10) | C10—C9—H9A | 118.6 |
| C3—C2—N1 | 112.65 (12) | C15—C10—C11 | 119.09 (13) |
| C3—C2—C7 | 127.97 (13) | C15—C10—C9 | 118.38 (12) |
| N1—C2—C7 | 119.37 (12) | C11—C10—C9 | 122.53 (12) |
| C2—C3—C4 | 127.31 (12) | C12—C11—C10 | 120.55 (12) |
| C2—C3—S1 | 112.14 (10) | C12—C11—H11A | 119.7 |
| C4—C3—S1 | 120.50 (11) | C10—C11—H11A | 119.7 |
| O2—C4—O1 | 123.89 (13) | O3—C12—C11 | 125.70 (13) |
| O2—C4—C3 | 124.66 (13) | O3—C12—C13 | 114.35 (12) |
| O1—C4—C3 | 111.45 (11) | C11—C12—C13 | 119.95 (13) |
| O1—C5—C6 | 107.59 (11) | O4—C13—C14 | 123.43 (13) |
| O1—C5—H5A | 110.2 | O4—C13—C12 | 116.96 (12) |
| C6—C5—H5A | 110.2 | C14—C13—C12 | 119.61 (13) |
| O1—C5—H5B | 110.2 | C13—C14—C15 | 120.03 (13) |
| C6—C5—H5B | 110.2 | C13—C14—H14A | 120.0 |
| H5A—C5—H5B | 108.5 | C15—C14—H14A | 120.0 |
| C5—C6—H6A | 109.5 | C14—C15—C10 | 120.74 (13) |
| C5—C6—H6B | 109.5 | C14—C15—H15A | 119.6 |
| H6A—C6—H6B | 109.5 | C10—C15—H15A | 119.6 |
| C5—C6—H6C | 109.5 | O3—C16—H16A | 109.5 |
| H6A—C6—H6C | 109.5 | O3—C16—H16B | 109.5 |
| H6B—C6—H6C | 109.5 | H16A—C16—H16B | 109.5 |
| C2—C7—H7A | 109.5 | O3—C16—H16C | 109.5 |
| C2—C7—H7B | 109.5 | H16A—C16—H16C | 109.5 |
| H7A—C7—H7B | 109.5 | H16B—C16—H16C | 109.5 |
| C1—N2—N3—C9 | −177.01 (11) | S1—C3—C4—O2 | 179.55 (11) |
| N3—N2—C1—N1 | 179.73 (11) | C2—C3—C4—O1 | −177.28 (13) |
| N3—N2—C1—S1 | 0.40 (17) | S1—C3—C4—O1 | −0.06 (16) |
| C2—N1—C1—N2 | 179.91 (12) | C4—O1—C5—C6 | 171.31 (11) |
| C8—N1—C1—N2 | −1.54 (19) | N2—N3—C9—C10 | −179.74 (11) |
| C2—N1—C1—S1 | −0.65 (15) | N3—C9—C10—C15 | 179.88 (13) |
| C8—N1—C1—S1 | 177.90 (10) | N3—C9—C10—C11 | −0.5 (2) |
| C3—S1—C1—N2 | 179.35 (13) | C15—C10—C11—C12 | 0.6 (2) |
| C3—S1—C1—N1 | −0.04 (10) | C9—C10—C11—C12 | −178.93 (12) |
| C1—N1—C2—C3 | 1.22 (17) | C16—O3—C12—C11 | −7.2 (2) |
| C8—N1—C2—C3 | −177.22 (12) | C16—O3—C12—C13 | 172.68 (12) |
| C1—N1—C2—C7 | −178.01 (11) | C10—C11—C12—O3 | 177.97 (12) |
| C8—N1—C2—C7 | 3.6 (2) | C10—C11—C12—C13 | −1.9 (2) |
| N1—C2—C3—C4 | 176.20 (13) | O3—C12—C13—O4 | 1.00 (18) |
| C7—C2—C3—C4 | −4.7 (2) | C11—C12—C13—O4 | −179.11 (12) |
| N1—C2—C3—S1 | −1.21 (15) | O3—C12—C13—C14 | −178.01 (12) |
| C7—C2—C3—S1 | 177.93 (11) | C11—C12—C13—C14 | 1.9 (2) |
| C1—S1—C3—C2 | 0.71 (11) | O4—C13—C14—C15 | −179.53 (13) |
| C1—S1—C3—C4 | −176.90 (11) | C12—C13—C14—C15 | −0.6 (2) |
| C5—O1—C4—O2 | 1.04 (19) | C13—C14—C15—C10 | −0.7 (2) |
| C5—O1—C4—C3 | −179.34 (11) | C11—C10—C15—C14 | 0.7 (2) |
| C2—C3—C4—O2 | 2.3 (2) | C9—C10—C15—C14 | −179.74 (12) |
| H··· | ||||
| C7—H7 | 0.98 | 2.28 | 3.0111 (19) | 130 |
| O4—H4 | 0.84 | 1.85 | 2.6878 (14) | 176 |
| C16—H16 | 0.98 | 2.41 | 3.3824 (18) | 171 |
| C8—H8 | 0.98 | 2.62 | 3.3986 (19) | 137 |
| C6—H6 | 0.98 | 2.96 | 3.6414 (16) | 128 |
| C7—H7 | 0.98 | 2.62 | 3.4762 (16) | 146 |
Hydrogen-bond geometry (Å, °)
Cg1 is the centroid of the C10–C15 ring.
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| C7—H7 | 0.98 | 2.28 | 3.0111 (19) | 130 |
| O4—H4 | 0.84 | 1.85 | 2.6878 (14) | 176 |
| C16—H16 | 0.98 | 2.41 | 3.3824 (18) | 171 |
| C8—H8 | 0.98 | 2.62 | 3.3986 (19) | 137 |
| C6—H6 | 0.98 | 2.96 | 3.6414 (16) | 128 |
| C7—H7 | 0.98 | 2.62 | 3.4762 (16) | 146 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) .