Literature DB >> 22969599

6,6'-Dimeth-oxy-2,2'-{[(E,E)-hydrazine-1,2-diyl-idene]bis-(methanylyl-idene)}diphenol methanol disolvate.

Nicholas M Randell, Laurence K Thompson, Louise N Dawe.   

Abstract

The title compound, C(16)H(16)N(2)O(4)·2CH(3)OH, is a hydrazone in an E geometric arrangement, with an inversion centre at the mid-point of the N-N bond. A symmetry-related pair of six-membered hydrogen-bonded rings [graph-set motif S(1) (1)(6)] are present for the terminal vanillin-imine moieties. Two lattice methanol solvent mol-ecules are present per formula unit (Z' = 1/2), which form hydrogen-bonded chains along [010] with two orientations due to disorder of the methanol H-atom.

Entities:  

Year:  2012        PMID: 22969599      PMCID: PMC3435728          DOI: 10.1107/S1600536812034940

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

The synthesis of the title compound was originally reported by Lin et al. (2009 ▶); however, in this study, it was obtained from (2Z,6Z,N′2E,N′6E)-N′2,N′6-bis­(2-hy­droxy-3-meth­oxy­benzyl­idene)pyridine-2,6-bis­(carbohydrazonic) acid (Vadavi et al. 2011 ▶). The title compound has been used in the synthesis of first-row transition metal complexes (Zou et al. 2011 ▶) and in the synthesis of lanthanide complexes (Davidson et al. 2006 ▶). A solvent-free structure of the title compound has been previously reported (Lu et al. 2011 ▶) and contains a similar intra­molecular hydrogen-bonding motif (Bernstein et al. 1995 ▶, Etter et al. 1990 ▶) to that reported herein.

Experimental

Crystal data

C16H16N2O4·2CH4O M = 364.39 Monoclinic, a = 20.517 (2) Å b = 4.8374 (5) Å c = 21.366 (3) Å β = 153.566 (7)° V = 944.0 (3) Å3 Z = 2 Mo Kα radiation μ = 0.10 mm−1 T = 163 K 0.59 × 0.14 × 0.13 mm

Data collection

Rigaku Saturn70 CCD diffractometer Absorption correction: multi-scan (REQAB; Jacobson, 1998 ▶) T min = 0.725, T max = 1.000 12068 measured reflections 1941 independent reflections 1651 reflections with I > 2σ(I) R int = 0.036

Refinement

R[F 2 > 2σ(F 2)] = 0.062 wR(F 2) = 0.194 S = 1.09 1941 reflections 129 parameters 4 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.32 e Å−3 Δρmin = −0.41 e Å−3 Data collection: CrystalClear-SM Expert (Rigaku, 2009 ▶); cell refinement: CrystalClear-SM Expert; data reduction: CrystalClear-SM Expert; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: OLEX2 (Dolomanov et al., 2009 ▶); software used to prepare material for publication: OLEX2. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812034940/hg5235sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812034940/hg5235Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C16H16N2O4·2CH4OF(000) = 388
Mr = 364.39Dx = 1.282 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71075 Å
Hall symbol: -P 2ybcCell parameters from 9154 reflections
a = 20.517 (2) Åθ = 3.4–27.6°
b = 4.8374 (5) ŵ = 0.10 mm1
c = 21.366 (3) ÅT = 163 K
β = 153.566 (7)°Irregular, yellow
V = 944.0 (3) Å30.59 × 0.14 × 0.13 mm
Z = 2
Rigaku Saturn70 CCD diffractometer1941 independent reflections
Radiation source: fine-focus sealed tube1651 reflections with I > 2σ(I)
Graphite - Rigaku SHINE monochromatorRint = 0.036
Detector resolution: 14.63 pixels mm-1θmax = 26.5°, θmin = 3.4°
ω scansh = −25→25
Absorption correction: multi-scan (REQAB; Jacobson, 1998)k = −5→6
Tmin = 0.725, Tmax = 1.000l = −26→26
12068 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.062Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.194H atoms treated by a mixture of independent and constrained refinement
S = 1.09w = 1/[σ2(Fo2) + (0.118P)2 + 0.3328P] where P = (Fo2 + 2Fc2)/3
1941 reflections(Δ/σ)max < 0.001
129 parametersΔρmax = 0.32 e Å3
4 restraintsΔρmin = −0.41 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/UeqOcc. (<1)
O20.26395 (15)0.6929 (3)0.38898 (14)0.0446 (4)
H20.318 (3)0.797 (6)0.411 (3)0.067*
C30.51958 (19)0.5637 (4)0.61567 (19)0.0321 (4)
C40.6264 (2)0.3959 (4)0.73588 (19)0.0360 (5)
H40.72400.41310.80820.043*
C20.37270 (19)0.5380 (4)0.50753 (18)0.0341 (5)
C10.3337 (2)0.3422 (4)0.52005 (19)0.0357 (5)
C60.4408 (2)0.1796 (4)0.6393 (2)0.0367 (5)
H60.41510.05140.64780.044*
C50.5869 (2)0.2059 (4)0.74696 (19)0.0381 (5)
H50.65800.09490.82650.046*
O10.18781 (15)0.3354 (3)0.40867 (15)0.0490 (5)
N10.46904 (17)0.9117 (3)0.49594 (16)0.0353 (4)
C80.5634 (2)0.7607 (4)0.60529 (19)0.0347 (4)
H80.66190.77720.67960.042*
C70.1407 (2)0.1307 (5)0.4117 (2)0.0498 (6)
H7A0.03600.13640.32530.075*
H7B0.18390.16670.48900.075*
H7C0.1704−0.04870.42290.075*
O30.0380 (3)0.2477 (5)0.0577 (3)0.0813 (7)
H3A0.032 (10)0.428 (5)0.044 (9)0.122*0.50
H3B−0.024 (7)0.138 (13)−0.015 (5)0.122*0.50
C90.0339 (3)0.2220 (7)0.1198 (3)0.0704 (8)
H9A−0.06610.22280.04780.106*
H9B0.08530.37420.18270.106*
H9C0.07960.05160.17130.106*
U11U22U33U12U13U23
O20.0338 (7)0.0509 (9)0.0391 (8)0.0011 (6)0.0315 (7)0.0087 (6)
C30.0351 (9)0.0337 (10)0.0352 (9)−0.0036 (7)0.0323 (8)−0.0044 (7)
C40.0330 (9)0.0410 (10)0.0353 (9)−0.0003 (7)0.0308 (9)−0.0011 (8)
C20.0345 (9)0.0356 (10)0.0340 (9)0.0001 (7)0.0309 (9)0.0006 (7)
C10.0339 (9)0.0396 (10)0.0364 (9)−0.0047 (8)0.0318 (9)−0.0036 (8)
C60.0442 (10)0.0364 (10)0.0427 (10)−0.0035 (8)0.0404 (10)−0.0019 (8)
C50.0406 (10)0.0400 (10)0.0367 (9)0.0033 (8)0.0349 (9)0.0035 (8)
O10.0352 (7)0.0593 (10)0.0456 (8)−0.0025 (6)0.0354 (7)0.0066 (7)
N10.0399 (8)0.0368 (9)0.0410 (9)−0.0055 (7)0.0376 (8)−0.0037 (7)
C80.0370 (9)0.0376 (10)0.0389 (9)−0.0043 (7)0.0351 (9)−0.0050 (8)
C70.0427 (11)0.0598 (14)0.0506 (12)−0.0086 (10)0.0422 (11)−0.0013 (10)
O30.0841 (14)0.0932 (16)0.0861 (14)−0.0099 (12)0.0783 (14)−0.0147 (13)
C90.0518 (13)0.098 (2)0.0550 (14)0.0091 (14)0.0472 (13)0.0002 (14)
O2—C21.354 (2)O1—C71.425 (3)
O2—H20.88 (3)N1—C81.281 (3)
C3—C21.402 (3)N1—N1i1.407 (3)
C3—C41.407 (3)C8—H80.9300
C3—C81.456 (3)C7—H7A0.9600
C4—C51.378 (3)C7—H7B0.9600
C4—H40.9300C7—H7C0.9600
C2—C11.412 (3)O3—C91.409 (4)
C1—O11.367 (2)O3—H3A0.89 (2)
C1—C61.383 (3)O3—H3B0.88 (2)
C6—C51.395 (3)C9—H9A0.9600
C6—H60.9300C9—H9B0.9600
C5—H50.9300C9—H9C0.9600
C2—O2—H298.1 (19)C8—N1—N1i113.50 (19)
C2—C3—C4119.54 (17)N1—C8—C3121.36 (17)
C2—C3—C8121.05 (17)N1—C8—H8119.3
C4—C3—C8119.41 (16)C3—C8—H8119.3
C5—C4—C3120.29 (17)O1—C7—H7A109.5
C5—C4—H4119.9O1—C7—H7B109.5
C3—C4—H4119.9H7A—C7—H7B109.5
O2—C2—C3122.92 (17)O1—C7—H7C109.5
O2—C2—C1117.48 (16)H7A—C7—H7C109.5
C3—C2—C1119.59 (17)H7B—C7—H7C109.5
O1—C1—C6125.69 (17)C9—O3—H3A106 (3)
O1—C1—C2114.56 (16)C9—O3—H3B113 (4)
C6—C1—C2119.74 (17)H3A—O3—H3B118 (7)
C1—C6—C5120.61 (17)O3—C9—H9A109.5
C1—C6—H6119.7O3—C9—H9B109.5
C5—C6—H6119.7H9A—C9—H9B109.5
C4—C5—C6120.23 (17)O3—C9—H9C109.5
C4—C5—H5119.9H9A—C9—H9C109.5
C6—C5—H5119.9H9B—C9—H9C109.5
C1—O1—C7117.07 (16)
D—H···AD—HH···AD···AD—H···A
O2—H2···N10.88 (3)1.77 (7)2.613 (5)160 (3)
O3—H3A···O3ii0.89 (8)1.91 (7)2.754 (4)157 (9)
O3—H3B···O3iii0.88 (7)1.98 (7)2.715 (4)140 (5)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
O2—H2⋯N10.88 (3)1.77 (7)2.613 (5)160 (3)
O3—H3A⋯O3i 0.89 (8)1.91 (7)2.754 (4)157 (9)
O3—H3B⋯O3ii 0.88 (7)1.98 (7)2.715 (4)140 (5)

Symmetry codes: (i) ; (ii) .

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