Literature DB >> 23265799

Efficient and robust model-to-image alignment using 3D scale-invariant features.

Matthew Toews1, William M Wells.   

Abstract

This paper presents feature-based alignment (FBA), a general method for efficient and robust model-to-image alignment. Volumetric images, e.g. CT scans of the human body, are modeled probabilistically as a collage of 3D scale-invariant image features within a normalized reference space. Features are incorporated as a latent random variable and marginalized out in computing a maximum a posteriori alignment solution. The model is learned from features extracted in pre-aligned training images, then fit to features extracted from a new image to identify a globally optimal locally linear alignment solution. Novel techniques are presented for determining local feature orientation and efficiently encoding feature intensity in 3D. Experiments involving difficult magnetic resonance (MR) images of the human brain demonstrate FBA achieves alignment accuracy similar to widely-used registration methods, while requiring a fraction of the memory and computation resources and offering a more robust, globally optimal solution. Experiments on CT human body scans demonstrate FBA as an effective system for automatic human body alignment where other alignment methods break down.
Copyright © 2012 Elsevier B.V. All rights reserved.

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Year:  2012        PMID: 23265799      PMCID: PMC3606671          DOI: 10.1016/j.media.2012.11.002

Source DB:  PubMed          Journal:  Med Image Anal        ISSN: 1361-8415            Impact factor:   8.545


  42 in total

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Journal:  IEEE Trans Med Imaging       Date:  2010-09-27       Impact factor: 10.048

2.  Automatic categorization of medical images for content-based retrieval and data mining.

Authors:  Thomas M Lehmann; Mark O Güld; Thomas Deselaers; Daniel Keysers; Henning Schubert; Klaus Spitzer; Hermann Ney; Berthold B Wein
Journal:  Comput Med Imaging Graph       Date:  2005 Mar-Apr       Impact factor: 4.790

3.  Fast Talairach Transformation for magnetic resonance neuroimages.

Authors:  Wieslaw L Nowinski; Guoyu Qian; K N Bhanu Prakash; Qingmao Hu; Aamer Aziz
Journal:  J Comput Assist Tomogr       Date:  2006 Jul-Aug       Impact factor: 1.826

4.  n-SIFT: n-dimensional scale invariant feature transform.

Authors:  Warren Cheung; Ghassan Hamarneh
Journal:  IEEE Trans Image Process       Date:  2009-06-05       Impact factor: 10.856

5.  Multi-modal volume registration by maximization of mutual information.

Authors:  W M Wells; P Viola; H Atsumi; S Nakajima; R Kikinis
Journal:  Med Image Anal       Date:  1996-03       Impact factor: 8.545

6.  Feature-based groupwise registration by hierarchical anatomical correspondence detection.

Authors:  Guorong Wu; Qian Wang; Hongjun Jia; Dinggang Shen
Journal:  Hum Brain Mapp       Date:  2011-03-09       Impact factor: 5.038

7.  Accuracy of CT colonography for detection of large adenomas and cancers.

Authors:  C Daniel Johnson; Mei-Hsiu Chen; Alicia Y Toledano; Jay P Heiken; Abraham Dachman; Mark D Kuo; Christine O Menias; Betina Siewert; Jugesh I Cheema; Richard G Obregon; Jeff L Fidler; Peter Zimmerman; Karen M Horton; Kevin Coakley; Revathy B Iyer; Amy K Hara; Robert A Halvorsen; Giovanna Casola; Judy Yee; Benjamin A Herman; Lawrence J Burgart; Paul J Limburg
Journal:  N Engl J Med       Date:  2008-09-18       Impact factor: 91.245

8.  Feature-based morphometry: discovering group-related anatomical patterns.

Authors:  Matthew Toews; William Wells; D Louis Collins; Tal Arbel
Journal:  Neuroimage       Date:  2009-10-21       Impact factor: 6.556

9.  Robust Point Set Registration Using Gaussian Mixture Models.

Authors:  Bing Jian; Baba C Vemuri
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  2010-12-23       Impact factor: 6.226

10.  Automatic classification of MR scans in Alzheimer's disease.

Authors:  Stefan Klöppel; Cynthia M Stonnington; Carlton Chu; Bogdan Draganski; Rachael I Scahill; Jonathan D Rohrer; Nick C Fox; Clifford R Jack; John Ashburner; Richard S J Frackowiak
Journal:  Brain       Date:  2008-01-17       Impact factor: 13.501

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  20 in total

1.  Keypoint Transfer Segmentation.

Authors:  C Wachinger; M Toews; G Langs; W Wells; P Golland
Journal:  Inf Process Med Imaging       Date:  2015

2.  Feature-based alignment of volumetric multi-modal images.

Authors:  Matthew Toews; Lilla Zöllei; William M Wells
Journal:  Inf Process Med Imaging       Date:  2013

3.  Patient-specific biomechanical model as whole-body CT image registration tool.

Authors:  Mao Li; Karol Miller; Grand Roman Joldes; Barry Doyle; Revanth Reddy Garlapati; Ron Kikinis; Adam Wittek
Journal:  Med Image Anal       Date:  2015-01-30       Impact factor: 8.545

Review 4.  Deformable medical image registration: a survey.

Authors:  Aristeidis Sotiras; Christos Davatzikos; Nikos Paragios
Journal:  IEEE Trans Med Imaging       Date:  2013-05-31       Impact factor: 10.048

5.  Comparative evaluation of registration algorithms in different brain databases with varying difficulty: results and insights.

Authors:  Yangming Ou; Hamed Akbari; Michel Bilello; Xiao Da; Christos Davatzikos
Journal:  IEEE Trans Med Imaging       Date:  2014-06-13       Impact factor: 10.048

Review 6.  Using the variogram for vector outlier screening: application to feature-based image registration.

Authors:  Jie Luo; Sarah Frisken; Ines Machado; Miaomiao Zhang; Steve Pieper; Polina Golland; Matthew Toews; Prashin Unadkat; Alireza Sedghi; Haoyin Zhou; Alireza Mehrtash; Frank Preiswerk; Cheng-Chieh Cheng; Alexandra Golby; Masashi Sugiyama; William M Wells
Journal:  Int J Comput Assist Radiol Surg       Date:  2018-08-10       Impact factor: 2.924

7.  Deformable MRI-Ultrasound registration using correlation-based attribute matching for brain shift correction: Accuracy and generality in multi-site data.

Authors:  Inês Machado; Matthew Toews; Elizabeth George; Prashin Unadkat; Walid Essayed; Jie Luo; Pedro Teodoro; Herculano Carvalho; Jorge Martins; Polina Golland; Steve Pieper; Sarah Frisken; Alexandra Golby; William Wells Iii; Yangming Ou
Journal:  Neuroimage       Date:  2019-08-22       Impact factor: 6.556

8.  Phantomless Auto-Calibration and Online Calibration Assessment for a Tracked Freehand 2-D Ultrasound Probe.

Authors:  Matthew Toews; William M Wells
Journal:  IEEE Trans Med Imaging       Date:  2017-09-11       Impact factor: 10.048

9.  Decomposing cerebral blood flow MRI into functional and structural components: a non-local approach based on prediction.

Authors:  Benjamin M Kandel; Danny J J Wang; John A Detre; James C Gee; Brian B Avants
Journal:  Neuroimage       Date:  2014-11-01       Impact factor: 6.556

10.  A Feature-Based Approach to Big Data Analysis of Medical Images.

Authors:  Matthew Toews; Christian Wachinger; Raul San Jose Estepar; William M Wells
Journal:  Inf Process Med Imaging       Date:  2015
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