Literature DB >> 30097956

Using the variogram for vector outlier screening: application to feature-based image registration.

Jie Luo1,2, Sarah Frisken3, Ines Machado3, Miaomiao Zhang4, Steve Pieper3, Polina Golland5, Matthew Toews6, Prashin Unadkat3, Alireza Sedghi3, Haoyin Zhou3, Alireza Mehrtash3, Frank Preiswerk3, Cheng-Chieh Cheng3, Alexandra Golby3, Masashi Sugiyama7,8, William M Wells3,5.   

Abstract

PURPOSE: Matching points that are derived from features or landmarks in image data is a key step in some medical imaging applications. Since most robust point matching algorithms claim to be able to deal with outliers, users may place high confidence in the matching result and use it without further examination. However, for tasks such as feature-based registration in image-guided neurosurgery, even a few mismatches, in the form of invalid displacement vectors, could cause serious consequences. As a result, having an effective tool by which operators can manually screen all matches for outliers could substantially benefit the outcome of those applications.
METHODS: We introduce a novel variogram-based outlier screening method for vectors. The variogram is a powerful geostatistical tool for characterizing the spatial dependence of stochastic processes. Since the spatial correlation of invalid displacement vectors, which are considered as vector outliers, tends to behave differently than normal displacement vectors, they can be efficiently identified on the variogram.
RESULTS: We validate the proposed method on 9 sets of clinically acquired ultrasound data. In the experiment, potential outliers are flagged on the variogram by one operator and further evaluated by 8 experienced medical imaging researchers. The matching quality of those potential outliers is approximately 1.5 lower, on a scale from 1 (bad) to 5 (good), than valid displacement vectors.
CONCLUSION: The variogram is a simple yet informative tool. While being used extensively in geostatistical analysis, it has not received enough attention in the medical imaging field. We believe there is a good deal of potential for clinically applying the proposed outlier screening method. By way of this paper, we also expect researchers to find variogram useful in other medical applications that involve motion vectors analyses.

Entities:  

Keywords:  Feature-based registration; Neurosurgery; Variogram; Vector outlier screening

Mesh:

Year:  2018        PMID: 30097956      PMCID: PMC6224309          DOI: 10.1007/s11548-018-1840-5

Source DB:  PubMed          Journal:  Int J Comput Assist Radiol Surg        ISSN: 1861-6410            Impact factor:   2.924


  10 in total

1.  Point set registration: coherent point drift.

Authors:  Andriy Myronenko; Xubo Song
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  2010-12       Impact factor: 6.226

2.  Fluorescence-guided surgery with 5-aminolevulinic acid for resection of malignant glioma: a randomised controlled multicentre phase III trial.

Authors:  Walter Stummer; Uwe Pichlmeier; Thomas Meinel; Otmar Dieter Wiestler; Friedhelm Zanella; Hans-Jürgen Reulen
Journal:  Lancet Oncol       Date:  2006-05       Impact factor: 41.316

Review 3.  Brain shift in neuronavigation of brain tumors: A review.

Authors:  Ian J Gerard; Marta Kersten-Oertel; Kevin Petrecca; Denis Sirhan; Jeffery A Hall; D Louis Collins
Journal:  Med Image Anal       Date:  2016-08-24       Impact factor: 8.545

4.  Clinical utility and cost-effectiveness of interactive image-guided craniotomy: clinical comparison between conventional and image-guided meningioma surgery.

Authors:  T S Paleologos; J P Wadley; N D Kitchen; D G Thomas
Journal:  Neurosurgery       Date:  2000-07       Impact factor: 4.654

5.  3D intra-operative ultrasound and MR image guidance: pursuing an ultrasound-based management of brainshift to enhance neuronavigation.

Authors:  Marco Riva; Christoph Hennersperger; Fausto Milletari; Amin Katouzian; Federico Pessina; Benjamin Gutierrez-Becker; Antonella Castellano; Nassir Navab; Lorenzo Bello
Journal:  Int J Comput Assist Radiol Surg       Date:  2017-04-08       Impact factor: 2.924

6.  Clinical validation of vessel-based registration for correction of brain-shift.

Authors:  I Reinertsen; F Lindseth; G Unsgaard; D L Collins
Journal:  Med Image Anal       Date:  2007-06-30       Impact factor: 8.545

7.  Efficient and robust model-to-image alignment using 3D scale-invariant features.

Authors:  Matthew Toews; William M Wells
Journal:  Med Image Anal       Date:  2012-11-29       Impact factor: 8.545

8.  Robust Point Set Registration Using Gaussian Mixture Models.

Authors:  Bing Jian; Baba C Vemuri
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  2010-12-23       Impact factor: 6.226

9.  Intraoperative image guidance in neurosurgery: development, current indications, and future trends.

Authors:  Chris Schulz; Stephan Waldeck; Uwe Max Mauer
Journal:  Radiol Res Pract       Date:  2012-05-08

Review 10.  Intraoperative Imaging Modalities and Compensation for Brain Shift in Tumor Resection Surgery.

Authors:  Siming Bayer; Andreas Maier; Martin Ostermeier; Rebecca Fahrig
Journal:  Int J Biomed Imaging       Date:  2017-06-05
  10 in total
  4 in total

1.  Registration of vascular structures using a hybrid mixture model.

Authors:  Siming Bayer; Zhiwei Zhai; Maddalena Strumia; Xiaoguang Tong; Ying Gao; Marius Staring; Berend Stoel; Rebecca Fahrig; Arya Nabavi; Andreas Maier; Nishant Ravikumar
Journal:  Int J Comput Assist Radiol Surg       Date:  2019-06-07       Impact factor: 2.924

2.  Deformable MRI-Ultrasound registration using correlation-based attribute matching for brain shift correction: Accuracy and generality in multi-site data.

Authors:  Inês Machado; Matthew Toews; Elizabeth George; Prashin Unadkat; Walid Essayed; Jie Luo; Pedro Teodoro; Herculano Carvalho; Jorge Martins; Polina Golland; Steve Pieper; Sarah Frisken; Alexandra Golby; William Wells Iii; Yangming Ou
Journal:  Neuroimage       Date:  2019-08-22       Impact factor: 6.556

3.  Comparing Methods for Measurement Error Detection in Serial 24-h Hormonal Data.

Authors:  Evie van der Spoel; Jungyeon Choi; Ferdinand Roelfsema; Saskia le Cessie; Diana van Heemst; Olaf M Dekkers
Journal:  J Biol Rhythms       Date:  2019-06-12       Impact factor: 3.182

4.  Logarithmic Fuzzy Entropy Function for Similarity Measurement in Multimodal Medical Images Registration.

Authors:  Yu Miao; Jiaying Gao; Ke Zhang; Weili Shi; Yanfang Li; Jiashi Zhao; Zhengang Jiang; Huamin Yang; Fei He; Wei He; Jun Qin; Tao Chen
Journal:  Comput Math Methods Med       Date:  2020-02-12       Impact factor: 2.238

  4 in total

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