Literature DB >> 31446127

Deformable MRI-Ultrasound registration using correlation-based attribute matching for brain shift correction: Accuracy and generality in multi-site data.

Inês Machado1, Matthew Toews2, Elizabeth George3, Prashin Unadkat4, Walid Essayed4, Jie Luo5, Pedro Teodoro6, Herculano Carvalho7, Jorge Martins8, Polina Golland9, Steve Pieper10, Sarah Frisken3, Alexandra Golby4, William Wells Iii11, Yangming Ou12.   

Abstract

Intraoperative tissue deformation, known as brain shift, decreases the benefit of using preoperative images to guide neurosurgery. Non-rigid registration of preoperative magnetic resonance (MR) to intraoperative ultrasound (iUS) has been proposed as a means to compensate for brain shift. We focus on the initial registration from MR to predurotomy iUS. We present a method that builds on previous work to address the need for accuracy and generality of MR-iUS registration algorithms in multi-site clinical data. High-dimensional texture attributes were used instead of image intensities for image registration and the standard difference-based attribute matching was replaced with correlation-based attribute matching. A strategy that deals explicitly with the large field-of-view mismatch between MR and iUS images was proposed. Key parameters were optimized across independent MR-iUS brain tumor datasets acquired at 3 institutions, with a total of 43 tumor patients and 758 reference landmarks for evaluating the accuracy of the proposed algorithm. Despite differences in imaging protocols, patient demographics and landmark distributions, the algorithm is able to reduce landmark errors prior to registration in three data sets (5.37±4.27, 4.18±1.97 and 6.18±3.38 mm, respectively) to a consistently low level (2.28±0.71, 2.08±0.37 and 2.24±0.78 mm, respectively). This algorithm was tested against 15 other algorithms and it is competitive with the state-of-the-art on multiple datasets. We show that the algorithm has one of the lowest errors in all datasets (accuracy), and this is achieved while sticking to a fixed set of parameters for multi-site data (generality). In contrast, other algorithms/tools of similar performance need per-dataset parameter tuning (high accuracy but lower generality), and those that stick to fixed parameters have larger errors or inconsistent performance (generality but not the top accuracy). Landmark errors were further characterized according to brain regions and tumor types, a topic so far missing in the literature.
Copyright © 2019 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Brain Tumor; Brain shift; Intraoperative ultrasound; MR-iUS registration; Multi-site data; Surgical Guidance

Mesh:

Year:  2019        PMID: 31446127      PMCID: PMC6819249          DOI: 10.1016/j.neuroimage.2019.116094

Source DB:  PubMed          Journal:  Neuroimage        ISSN: 1053-8119            Impact factor:   6.556


  61 in total

1.  Nonrigid registration using free-form deformations: application to breast MR images.

Authors:  D Rueckert; L I Sonoda; C Hayes; D L Hill; M O Leach; D J Hawkes
Journal:  IEEE Trans Med Imaging       Date:  1999-08       Impact factor: 10.048

2.  Deformable segmentation of 3-D ultrasound prostate images using statistical texture matching method.

Authors:  Yiqiang Zhan; Dinggang Shen
Journal:  IEEE Trans Med Imaging       Date:  2006-03       Impact factor: 10.048

3.  TPS-HAMMER: improving HAMMER registration algorithm by soft correspondence matching and thin-plate splines based deformation interpolation.

Authors:  Guorong Wu; Pew-Thian Yap; Minjeong Kim; Dinggang Shen
Journal:  Neuroimage       Date:  2009-10-28       Impact factor: 6.556

4.  Automatic deformable MR-ultrasound registration for image-guided neurosurgery.

Authors:  Hassan Rivaz; Sean Jy-Shyang Chen; D Louis Collins
Journal:  IEEE Trans Med Imaging       Date:  2014-09-17       Impact factor: 10.048

5.  Co-Sparse Analysis Model Based Image Registration to Compensate Brain Shift by Using Intra-Operative Ultrasound Imaging.

Authors:  P Farnia; E Najafzadeh; A Ahmadian; B Makkiabadi; M Alimohamadi; J Alirezaie
Journal:  Annu Int Conf IEEE Eng Med Biol Soc       Date:  2018-07

6.  Image similarity and tissue overlaps as surrogates for image registration accuracy: widely used but unreliable.

Authors:  Torsten Rohlfing
Journal:  IEEE Trans Med Imaging       Date:  2011-08-08       Impact factor: 10.048

7.  Nonrigid registration of ultrasound and MRI using contextual conditioned mutual information.

Authors:  Hassan Rivaz; Zahra Karimaghaloo; Vladimir S Fonov; D Louis Collins
Journal:  IEEE Trans Med Imaging       Date:  2014-03       Impact factor: 10.048

8.  Non-rigid registration of 3D ultrasound for neurosurgery using automatic feature detection and matching.

Authors:  Inês Machado; Matthew Toews; Jie Luo; Prashin Unadkat; Walid Essayed; Elizabeth George; Pedro Teodoro; Herculano Carvalho; Jorge Martins; Polina Golland; Steve Pieper; Sarah Frisken; Alexandra Golby; William Wells
Journal:  Int J Comput Assist Radiol Surg       Date:  2018-06-04       Impact factor: 2.924

9.  Sampling the spatial patterns of cancer: optimized biopsy procedures for estimating prostate cancer volume and Gleason Score.

Authors:  Yangming Ou; Dinggang Shen; Jianchao Zeng; Leon Sun; Judd Moul; Christos Davatzikos
Journal:  Med Image Anal       Date:  2009-05-23       Impact factor: 8.545

Review 10.  CustusX: an open-source research platform for image-guided therapy.

Authors:  Christian Askeland; Ole Vegard Solberg; Janne Beate Lervik Bakeng; Ingerid Reinertsen; Geir Arne Tangen; Erlend Fagertun Hofstad; Daniel Høyer Iversen; Cecilie Våpenstad; Tormod Selbekk; Thomas Langø; Toril A Nagelhus Hernes; Håkon Olav Leira; Geirmund Unsgård; Frank Lindseth
Journal:  Int J Comput Assist Radiol Surg       Date:  2015-09-26       Impact factor: 2.924

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  3 in total

1.  The Essential Role of Open Data and Software for the Future of Ultrasound-Based Neuronavigation.

Authors:  Ingerid Reinertsen; D Louis Collins; Simon Drouin
Journal:  Front Oncol       Date:  2021-02-02       Impact factor: 6.244

Review 2.  Intraoperative Imaging for High-Grade Glioma Surgery.

Authors:  Thomas Noh; Martina Mustroph; Alexandra J Golby
Journal:  Neurosurg Clin N Am       Date:  2020-11-05       Impact factor: 2.509

3.  Photoacoustic-MR Image Registration Based on a Co-Sparse Analysis Model to Compensate for Brain Shift.

Authors:  Parastoo Farnia; Bahador Makkiabadi; Maysam Alimohamadi; Ebrahim Najafzadeh; Maryam Basij; Yan Yan; Mohammad Mehrmohammadi; Alireza Ahmadian
Journal:  Sensors (Basel)       Date:  2022-03-21       Impact factor: 3.576

  3 in total

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