Literature DB >> 23249040

Critical appraisal of excited state nonadiabatic dynamics simulations of 9H-adenine.

Mario Barbatti1, Zhenggang Lan, Rachel Crespo-Otero, Jaroslaw J Szymczak, Hans Lischka, Walter Thiel.   

Abstract

In spite of the importance of nonadiabatic dynamics simulations for the understanding of ultrafast photo-induced phenomena, simulations based on different methodologies have often led to contradictory results. In this work, we proceed through a comprehensive investigation of on-the-fly surface-hopping simulations of 9H-adenine in the gas phase using different electronic structure theories (ab initio, semi-empirical, and density functional methods). Simulations that employ ab initio and semi-empirical multireference configuration interaction methods predict the experimentally observed ultrafast deactivation of 9H-adenine with similar time scales, however, through different internal conversion channels. Simulations based on time-dependent density functional theory with six different hybrid and range-corrected functionals fail to predict the ultrafast deactivation. The origin of these differences is analyzed by systematic calculations of the relevant reaction pathways, which show that these discrepancies can always be traced back to topographical features of the underlying potential energy surfaces.

Entities:  

Mesh:

Substances:

Year:  2012        PMID: 23249040     DOI: 10.1063/1.4731649

Source DB:  PubMed          Journal:  J Chem Phys        ISSN: 0021-9606            Impact factor:   3.488


  6 in total

1.  Benchmarking coupled cluster methods on singlet excited states of nucleobases.

Authors:  Dániel Kánnár; Péter G Szalay
Journal:  J Mol Model       Date:  2014-11-14       Impact factor: 1.810

2.  Insights into the deactivation of 5-bromouracil after ultraviolet excitation.

Authors:  Francesca Peccati; Sebastian Mai; Leticia González
Journal:  Philos Trans A Math Phys Eng Sci       Date:  2017-04-28       Impact factor: 4.226

3.  Machine Learning for Electronically Excited States of Molecules.

Authors:  Julia Westermayr; Philipp Marquetand
Journal:  Chem Rev       Date:  2020-11-19       Impact factor: 60.622

4.  The Ultrafast Quantum Dynamics of Photoexcited Adenine-Thymine Basepair Investigated with a Fragment-based Diabatization and a Linear Vibronic Coupling Model.

Authors:  Martha Yaghoubi Jouybari; James A Green; Roberto Improta; Fabrizio Santoro
Journal:  J Phys Chem A       Date:  2021-10-05       Impact factor: 2.944

5.  Electronic and structural elements that regulate the excited-state dynamics in purine nucleobase derivatives.

Authors:  Carlos E Crespo-Hernández; Lara Martínez-Fernández; Clemens Rauer; Christian Reichardt; Sebastian Mai; Marvin Pollum; Philipp Marquetand; Leticia González; Inés Corral
Journal:  J Am Chem Soc       Date:  2015-03-25       Impact factor: 15.419

6.  Multiple Decay Mechanisms and 2D-UV Spectroscopic Fingerprints of Singlet Excited Solvated Adenine-Uracil Monophosphate.

Authors:  Quansong Li; Angelo Giussani; Javier Segarra-Martí; Artur Nenov; Ivan Rivalta; Alexander A Voityuk; Shaul Mukamel; Daniel Roca-Sanjuán; Marco Garavelli; Lluís Blancafort
Journal:  Chemistry       Date:  2016-04-26       Impact factor: 5.236

  6 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.