Literature DB >> 23222485

Tbf1 and Vid22 promote resection and non-homologous end joining of DNA double-strand break ends.

Diego Bonetti1, Savani Anbalagan, Giovanna Lucchini, Michela Clerici, Maria Pia Longhese.   

Abstract

The repair of DNA double-strand breaks (DSBs) is crucial for maintaining genome stability. The Saccharomyces cerevisiae protein Tbf1, which is characterized by a Myb domain and is related to mammalian TRF1 and TRF2, has been proposed to act as a transcriptional activator. Here, we show that Tbf1 and its interacting protein Vid22 are new players in the response to DSBs. Inactivation of either TBF1 or VID22 causes hypersensitivity to DSB-inducing agents and shows strong negative interactions with mutations affecting homologous recombination. Furthermore, Tbf1 and Vid22 are recruited to an HO-induced DSB, where they promote both resection of DNA ends and repair by non-homologous end joining. Finally, inactivation of either Tbf1 or Vid22 impairs nucleosome eviction around the DSB, suggesting that these proteins promote efficient repair of the break by influencing chromatin identity in its surroundings.

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Year:  2012        PMID: 23222485      PMCID: PMC3553383          DOI: 10.1038/emboj.2012.327

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  47 in total

1.  An activation-independent role of transcription factors in insulator function.

Authors:  G Fourel; C Boscheron; E Revardel; E Lebrun; Y F Hu; K C Simmen; K Müller; R Li; N Mermod; E Gilson
Journal:  EMBO Rep       Date:  2001-02       Impact factor: 8.807

Review 2.  Mechanisms and regulation of DNA end resection.

Authors:  Maria Pia Longhese; Diego Bonetti; Nicola Manfrini; Michela Clerici
Journal:  EMBO J       Date:  2010-07-20       Impact factor: 11.598

3.  Sgs1 helicase and two nucleases Dna2 and Exo1 resect DNA double-strand break ends.

Authors:  Zhu Zhu; Woo-Hyun Chung; Eun Yong Shim; Sang Eun Lee; Grzegorz Ira
Journal:  Cell       Date:  2008-09-19       Impact factor: 41.582

4.  Sae2, Exo1 and Sgs1 collaborate in DNA double-strand break processing.

Authors:  Eleni P Mimitou; Lorraine S Symington
Journal:  Nature       Date:  2008-09-21       Impact factor: 49.962

5.  Identification of high affinity Tbf1p-binding sites within the budding yeast genome.

Authors:  C E Koering; G Fourel; E Binet-Brasselet; T Laroche; F Klein; E Gilson
Journal:  Nucleic Acids Res       Date:  2000-07-01       Impact factor: 16.971

6.  The telomere-binding protein Tbf1 demarcates snoRNA gene promoters in Saccharomyces cerevisiae.

Authors:  Milena Preti; Cyril Ribeyre; Chiara Pascali; Maria Cristina Bosio; Barbara Cortelazzi; Jacques Rougemont; Enrico Guarnera; Felix Naef; David Shore; Giorgio Dieci
Journal:  Mol Cell       Date:  2010-05-28       Impact factor: 17.970

7.  Functional differentiation of tbf1 orthologues in fission and budding yeasts.

Authors:  Moira M Cockell; Libera Lo Presti; Lorenzo Cerutti; Elena Cano Del Rosario; Philippe M Hauser; Viesturs Simanis
Journal:  Eukaryot Cell       Date:  2008-12-12

8.  Acetylated lysine 56 on histone H3 drives chromatin assembly after repair and signals for the completion of repair.

Authors:  Chin-Chuan Chen; Joshua J Carson; Jason Feser; Beth Tamburini; Susan Zabaronick; Jeffrey Linger; Jessica K Tyler
Journal:  Cell       Date:  2008-07-25       Impact factor: 41.582

9.  Cdk1 targets Srs2 to complete synthesis-dependent strand annealing and to promote recombinational repair.

Authors:  Marco Saponaro; Devon Callahan; Xiuzhong Zheng; Lumir Krejci; James E Haber; Hannah L Klein; Giordano Liberi
Journal:  PLoS Genet       Date:  2010-02-26       Impact factor: 5.917

10.  A library of yeast transcription factor motifs reveals a widespread function for Rsc3 in targeting nucleosome exclusion at promoters.

Authors:  Gwenael Badis; Esther T Chan; Harm van Bakel; Lourdes Pena-Castillo; Desiree Tillo; Kyle Tsui; Clayton D Carlson; Andrea J Gossett; Michael J Hasinoff; Christopher L Warren; Marinella Gebbia; Shaheynoor Talukder; Ally Yang; Sanie Mnaimneh; Dimitri Terterov; David Coburn; Ai Li Yeo; Zhen Xuan Yeo; Neil D Clarke; Jason D Lieb; Aseem Z Ansari; Corey Nislow; Timothy R Hughes
Journal:  Mol Cell       Date:  2008-12-26       Impact factor: 17.970

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  18 in total

1.  Biochemical and Functional Characterization of the NurA-HerA Complex from Deinococcus radiodurans.

Authors:  Kaiying Cheng; Xuanyi Chen; Guangzhi Xu; Liangyan Wang; Hong Xu; Su Yang; Ye Zhao; Yuejin Hua
Journal:  J Bacteriol       Date:  2015-04-13       Impact factor: 3.490

2.  Transcriptional control of yeast ribosome biogenesis: A multifaceted role for general regulatory factors.

Authors:  Maria Cristina Bosio; Beatrice Fermi; Giorgio Dieci
Journal:  Transcription       Date:  2017-04-27

Review 3.  53BP1, BRCA1, and the choice between recombination and end joining at DNA double-strand breaks.

Authors:  James M Daley; Patrick Sung
Journal:  Mol Cell Biol       Date:  2014-01-27       Impact factor: 4.272

4.  Partners in crime: Tbf1 and Vid22 promote expansions of long human telomeric repeats at an interstitial chromosome position in yeast.

Authors:  Elina A Radchenko; Anna Y Aksenova; Kirill V Volkov; Alexander A Shishkin; Youri I Pavlov; Sergei M Mirkin
Journal:  PNAS Nexus       Date:  2022-06-08

5.  The non-homologous end-joining pathway of S. cerevisiae works effectively in G1-phase cells, and religates cognate ends correctly and non-randomly.

Authors:  Shujuan Gao; Sangeet Honey; Bruce Futcher; Arthur P Grollman
Journal:  DNA Repair (Amst)       Date:  2016-04-14

6.  Exploring Quantitative Yeast Phenomics with Single-Cell Analysis of DNA Damage Foci.

Authors:  Erin B Styles; Karen J Founk; Lee A Zamparo; Tina L Sing; Dogus Altintas; Cyril Ribeyre; Virginie Ribaud; Jacques Rougemont; David Mayhew; Michael Costanzo; Matej Usaj; Adrian J Verster; Elizabeth N Koch; Daniele Novarina; Marco Graf; Brian Luke; Marco Muzi-Falconi; Chad L Myers; Robi David Mitra; David Shore; Grant W Brown; Zhaolei Zhang; Charles Boone; Brenda J Andrews
Journal:  Cell Syst       Date:  2016-09-08       Impact factor: 10.304

7.  A genomic screen revealing the importance of vesicular trafficking pathways in genome maintenance and protection against genotoxic stress in diploid Saccharomyces cerevisiae cells.

Authors:  Kamil Krol; Izabela Brozda; Marek Skoneczny; Maria Bretner; Maria Bretne; Adrianna Skoneczna
Journal:  PLoS One       Date:  2015-03-10       Impact factor: 3.240

8.  Genome-wide analysis of host factors in nodavirus RNA replication.

Authors:  Linhui Hao; Brett Lindenbach; Xiaofeng Wang; Billy Dye; David Kushner; Qiuling He; Michael Newton; Paul Ahlquist
Journal:  PLoS One       Date:  2014-04-21       Impact factor: 3.240

9.  Phosphorylated (pT371)TRF1 is recruited to sites of DNA damage to facilitate homologous recombination and checkpoint activation.

Authors:  Megan McKerlie; John R Walker; Taylor R H Mitchell; Florence R Wilson; Xu-Dong Zhu
Journal:  Nucleic Acids Res       Date:  2013-08-30       Impact factor: 16.971

10.  Identification of TTAGGG-binding proteins in Neurospora crassa, a fungus with vertebrate-like telomere repeats.

Authors:  Núria Casas-Vila; Marion Scheibe; Anja Freiwald; Dennis Kappei; Falk Butter
Journal:  BMC Genomics       Date:  2015-11-17       Impact factor: 3.969

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