| Literature DB >> 23213279 |
Shigeru Honda1, Hiroaki Bessho, Naoshi Kondo, Sentaro Kusuhara, Yasutomo Tsukahara, Akira Negi.
Abstract
PURPOSE: To clarify the association between cluster of differentiation 36 (CD36) gene polymorphisms and the response to photodynamic therapy (PDT) in polypoidal choroidal vasculopathy (PCV).Entities:
Mesh:
Substances:
Year: 2012 PMID: 23213279 PMCID: PMC3513185
Source DB: PubMed Journal: Mol Vis ISSN: 1090-0535 Impact factor: 2.367
Clinical parameters of PDT responders and non-responders.
| Responder | Non-Responder | P value | |
|---|---|---|---|
| Number of subjects | 73 | 64 |
|
| Gender (male/female) | 60/13 | 48/16 | 0.30 † |
| Age (years, mean±SD) | 72.8±7.2 | 74.7±8.3 | 0.16 * |
| GLD (μm, mean±SD) | 3730±1754 | 4133±1534 | 0.41 * |
| Baseline BCVA (logMAR) | 0.70±0.37 | 0.60±0.32 | 0.10 * |
GLD: greatest linear dimension, BCVA: best-corrected visual acuity, † χ2 test, * two-tailed unpaired t test.
Summary of the allelic association analysis regarding the response to PDT.
| SNP ID | Location | Major/Minor allele | Minor allelic frequency (No. of genotypes: major homo/hetero/minor homo) | Association analysis results | ||
|---|---|---|---|---|---|---|
| Responder (n=73) | Non-responder (n=64) | Allele OR (95% CI) | P value | |||
| Intron 1 | A/T | 0.12 (56/16/1) | 0.14 (48/14/2) | 0.86 (0.43–1.72) | 0.68 | |
| Intron 3 | G/A | 0.38 (28/35/10) | 0.34 (27/30/7) | 1.16 (0.70–1.92) | 0.57 | |
| Intron 3 | T/C | 0.12 (56/16/1) | 0.14 (48/14/2) | 0.86 (0.43–1.72) | 0.68 | |
| Intron 3 | G/A | 0.34 (35/26/12) | 0.24 (36/25/3) | 1.56 (0.94–2.61) | 0.082 | |
| Intron 3 | A/C | 0.28 (39/27/7) | 0.41 (20/35/9) | 0.54 (0.32–0.92) | 0.02 | |
| Intron 3 | T/C | 0.47 (22/33/18) | 0.38 (25/29/10) | 1.41 (0.88–2.26) | 0.15 | |
| Intron 3 | T/C | 0.4 (29/29/15) | 0.55 (9/39/16) | 0.54 (0.33–0.88) | 0.012 | |
| Intron 4 | C/T | 0.44 (21/40/12) | 0.48 (16/34/14) | 0.82 (0.49–1.35) | 0.42 | |
| Intron 4 | A/G | 0.43 (24/35/14) | 0.38 (23/34/7) | 1.28 (0.78–2.11) | 0.33 | |
| Intron 4 | T/A | 0.32 (37/26/10) | 0.43 (19/35/10) | 0.62 (0.38–1.01) | 0.054 | |
| Intron 4 | A/T | 0.25 (41/27/5) | 0.2 (40/23/1) | 1.42 (0.79–2.57) | 0.24 | |
| Intron 5 | G/A | 0.22 (46/22/5) | 0.3 (31/28/5) | 0.67 (0.39–1.16) | 0.15 | |
| Intron 6 | G/C | 0.12 (57/15/1) | 0.12 (49/14/1) | 0.92 (0.45–1.91) | 0.83 | |
| Intron 6 | A/C | 0.16 (52/19/2) | 0.11 (51/12/1) | 1.51 (0.74–3.05) | 0.25 | |
| Intron 7 | C/T | 0.14 (53/19/1) | 0.24 (38/21/5) | 0.54 (0.29–0.99) | 0.042 | |
| Intron 8 | A/G | 0.15 (53/18/2) | 0.2 (41/20/3) | 0.70 (0.38–1.31) | 0.26 | |
| Intron 11 | G/A | 0.2 (48/21/4) | 0.3 (32/26/6) | 0.60 (0.35–1.04) | 0.068 | |
| Intron 14 | A/G | 0.37 (29/34/10) | 0.42 (21/32/11) | 0.80 (0.49–1.31) | 0.38 | |
| 3′UTR | A/G | 0.48 (22/32/19) | 0.38 (21/38/5) | 1.57 (0.95–2.60) | 0.074 | |
OR: Odds ratio, which represents the contribution of the minor allele to visual improvement; CI: coefficient interval.
Summary of the genotype association analysis for selective SNPs associated with the response to PDT.
| Genotype frequency (number of subjects) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| SNP ID | Major/Minor | Responder (n=73) | Non-responder (n=64) | Dominant model | Recessive model | ||||||
| allele | Major homo | Hetero | Minor homo | Major homo | Hetero | Minor homo | OR (95%CI) | P value (corrected P) | OR (95%CI) | P value (corrected P) | |
| A/C | 0.53 (39) | 0.37 (27) | 0.1 (7) | 0.31 (20) | 0.55 (35) | 0.14 (9) | 0.40 (0.20–0.80) | 0.0085 (0.16) | 0.65 (0.23–1.85) | 0.42 (1.0) | |
| T/C | 0.4 (29) | 0.4 (29) | 0.2 (15) | 0.14 (9) | 0.61 (39) | 0.25 (16) | 0.25 (0.11–0.58) | 6.0×10–4 (0.011) | 0.78 (0.35–1.73) | 0.53 (1.0) | |
| C/T | 0.73 (53) | 0.26 (19) | 0.01 (1) | 0.59 (38) | 0.33 (21) | 0.08 (5) | 0.55 (0.27–1.13) | 0.1 (1.0) | 0.16 (0.02–1.44) | 0.057 (1.0) | |
OR: Odds ratio, which represents the contribution of the minor allele to visual improvement; CI: coefficient interval.
Logistic regression analysis for the response to PDT including SNP rs3173798.
| Explanatory variable | OR | 95%CI | P value |
|---|---|---|---|
| Presence of C allele in genotype at | 0.28 | 0.12–0.67 | 0.0043 |
| Age (years) | 0.97 | 0.93–1.02 | 0.27 |
| Gender (female=1, male=0) | 0.92 | 0.39–2.20 | 0.85 |
| Pre-treatment BCVA (logMAR) | 1.49 | 0.50–4.43 | 0.47 |
| GLD (μm) | 1 | 1.00–1.00 | 0.88 |
BCVA: best-corrected visual acuity; GLD: greatest linear dimension; OR: odds ratio; CI: coefficient interval.
Clinical details of the PCV patients stratified by the genotype of rs3173798 in the CD36 gene.
| T/T (n=38) | T/C (n=68) | C/C (n=31) | P value | |
|---|---|---|---|---|
| Gender (male/female) | 35/3 | 53/15 | 20/11 | 0.020 † |
| Age (years, mean±SD) | 72.7±7.9 | 73.3±7.7 | 75.8±7.6 | 0.21 * |
| GLD (μm, mean±SD) | 3755±2058 | 4064±1631 | 3872±1145 | 0.78 * |
| Baseline BCVA (logMAR) | 0.80±0.43 | 0.58±0.30 | 0.63±0.30 | 0.10 * |
| PDT frequency/year (mean±SD) | 1.3±0.5 | 1.6±0.7 | 1.6±0.6 | 0.63 * |
GLD: greatest linear dimension; BCVA: best-corrected visual acuity; PDT: photodynamic therapy. † χ2 test, * Kruskal–Wallis test.
Figure 1Influence of the genotype of rs3173798 in the CD36 gene on the time-course of the logMAR best-corrected visual acuity value in patients with polypoidal choroidal vasculopathy treated with polypoidal choroidal vasculopathy. All values are presented as means±SEM. The time points in each genotype were compared against the baseline. * p<0.05, ** p<0.005.