Literature DB >> 23178881

Drosophila patterning is established by differential association of mRNAs with P bodies.

Timothy T Weil1, Richard M Parton, Bram Herpers, Jan Soetaert, Tineke Veenendaal, Despina Xanthakis, Ian M Dobbie, James M Halstead, Rippei Hayashi, Catherine Rabouille, Ilan Davis.   

Abstract

The primary embryonic axes in flies, frogs and fish are formed through translational regulation of localized transcripts before fertilization. In Drosophila melanogaster, the axes are established through the transport and translational regulation of gurken (grk) and bicoid (bcd) messenger RNA in the oocyte and embryo. Both transcripts are translationally silent while being localized within the oocyte along microtubules by cytoplasmic dynein. Once localized, grk is translated at the dorsoanterior of the oocyte to send a TGF-α signal to the overlying somatic cells. In contrast, bcd is translationally repressed in the oocyte until its activation in early embryos when it forms an anteroposterior morphogenetic gradient. How this differential translational regulation is achieved is not fully understood. Here, we address this question using ultrastructural analysis, super-resolution microscopy and live-cell imaging. We show that grk and bcd ribonucleoprotein (RNP) complexes associate with electron-dense bodies that lack ribosomes and contain translational repressors. These properties are characteristic of processing bodies (P bodies), which are considered to be regions of cytoplasm where decisions are made on the translation and degradation of mRNA. Endogenous grk mRNA forms dynamic RNP particles that become docked and translated at the periphery of P bodies, where we show that the translational activator Oo18 RNA-binding protein (Orb, a homologue of CEPB) and the anchoring factor Squid (Sqd) are also enriched. In contrast, an excess of grk mRNA becomes localized inside the P bodies, where endogenous bcd mRNA is localized and translationally repressed. Interestingly, bcd mRNA dissociates from P bodies in embryos following egg activation, when it is known to become translationally active. We propose a general principle of translational regulation during axis specification involving remodelling of transport RNPs and dynamic partitioning of different transcripts between the translationally active edge of P bodies and their silent core.

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Year:  2012        PMID: 23178881      PMCID: PMC4066581          DOI: 10.1038/ncb2627

Source DB:  PubMed          Journal:  Nat Cell Biol        ISSN: 1465-7392            Impact factor:   28.824


  34 in total

1.  P-body formation is a consequence, not the cause, of RNA-mediated gene silencing.

Authors:  Ana Eulalio; Isabelle Behm-Ansmant; Daniel Schweizer; Elisa Izaurralde
Journal:  Mol Cell Biol       Date:  2007-04-02       Impact factor: 4.272

2.  Germline P granules are liquid droplets that localize by controlled dissolution/condensation.

Authors:  Clifford P Brangwynne; Christian R Eckmann; David S Courson; Agata Rybarska; Carsten Hoege; Jöbin Gharakhani; Frank Jülicher; Anthony A Hyman
Journal:  Science       Date:  2009-05-21       Impact factor: 47.728

3.  Role of p54 RNA helicase activity and its C-terminal domain in translational repression, P-body localization and assembly.

Authors:  Nicola Minshall; Michel Kress; Dominique Weil; Nancy Standart
Journal:  Mol Biol Cell       Date:  2009-03-18       Impact factor: 4.138

Review 4.  P granule assembly and function in Caenorhabditis elegans germ cells.

Authors:  Dustin Updike; Susan Strome
Journal:  J Androl       Date:  2009-10-29

5.  Drosophila Squid/hnRNP helps Dynein switch from a gurken mRNA transport motor to an ultrastructural static anchor in sponge bodies.

Authors:  Renald Delanoue; Bram Herpers; Jan Soetaert; Ilan Davis; Catherine Rabouille
Journal:  Dev Cell       Date:  2007-10       Impact factor: 12.270

6.  Changes in bicoid mRNA anchoring highlight conserved mechanisms during the oocyte-to-embryo transition.

Authors:  Timothy T Weil; Richard Parton; Ilan Davis; Elizabeth R Gavis
Journal:  Curr Biol       Date:  2008-07-22       Impact factor: 10.834

7.  Dynamic organization and plasticity of sponge bodies.

Authors:  Mark J Snee; Paul M Macdonald
Journal:  Dev Dyn       Date:  2009-04       Impact factor: 3.780

Review 8.  Eukaryotic stress granules: the ins and outs of translation.

Authors:  J Ross Buchan; Roy Parker
Journal:  Mol Cell       Date:  2009-12-25       Impact factor: 17.970

Review 9.  Polysomes, P bodies and stress granules: states and fates of eukaryotic mRNAs.

Authors:  Vidya Balagopal; Roy Parker
Journal:  Curr Opin Cell Biol       Date:  2009-04-23       Impact factor: 8.382

10.  The dynamics of fluorescently labeled endogenous gurken mRNA in Drosophila.

Authors:  Angela M Jaramillo; Timothy T Weil; Joseph Goodhouse; Elizabeth R Gavis; Trudi Schupbach
Journal:  J Cell Sci       Date:  2008-02-26       Impact factor: 5.285

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  52 in total

1.  Axonal ribosomes and mRNAs associate with fragile X granules in adult rodent and human brains.

Authors:  Michael R Akins; Hanna E Berk-Rauch; Kenneth Y Kwan; Molly E Mitchell; Katherine A Shepard; Lulu I T Korsak; Emily E Stackpole; Jennifer L Warner-Schmidt; Nenad Sestan; Heather A Cameron; Justin R Fallon
Journal:  Hum Mol Genet       Date:  2017-01-01       Impact factor: 6.150

2.  Control of tissue size and development by a regulatory element in the yorkie 3'UTR.

Authors:  Takanari Umegawachi; Hideki Yoshida; Hiromu Koshida; Momoko Yamada; Yasuyuki Ohkawa; Tetsuya Sato; Mikita Suyama; Henry M Krause; Masamitsu Yamaguchi
Journal:  Am J Cancer Res       Date:  2017-03-01       Impact factor: 6.166

3.  A genome-wide RNAi screen reveals that mRNA decapping restricts bunyaviral replication by limiting the pools of Dcp2-accessible targets for cap-snatching.

Authors:  Kaycie C Hopkins; Laura M McLane; Tariq Maqbool; Debasis Panda; Beth Gordesky-Gold; Sara Cherry
Journal:  Genes Dev       Date:  2013-07-01       Impact factor: 11.361

Review 4.  Synaptic control of local translation: the plot thickens with new characters.

Authors:  María Gabriela Thomas; Malena Lucía Pascual; Darío Maschi; Luciana Luchelli; Graciela Lidia Boccaccio
Journal:  Cell Mol Life Sci       Date:  2013-11-10       Impact factor: 9.261

5.  mRNA quantification using single-molecule FISH in Drosophila embryos.

Authors:  Tatjana Trcek; Timothée Lionnet; Hari Shroff; Ruth Lehmann
Journal:  Nat Protoc       Date:  2016-06-08       Impact factor: 13.491

Review 6.  Translational Control during Developmental Transitions.

Authors:  Felipe Karam Teixeira; Ruth Lehmann
Journal:  Cold Spring Harb Perspect Biol       Date:  2019-06-03       Impact factor: 10.005

7.  The temporally controlled expression of Drongo, the fruit fly homolog of AGFG1, is achieved in female germline cells via P-bodies and its localization requires functional Rab11.

Authors:  Irina E Catrina; Livia V Bayer; Giussepe Yanez; John M McLaughlin; Kornelia Malaczek; Ekaterina Bagaeva; Salvatore A E Marras; Diana P Bratu
Journal:  RNA Biol       Date:  2016-08-11       Impact factor: 4.652

8.  Resolving the spatial relationship between intracellular components by dual color super resolution optical fluctuations imaging (SOFI).

Authors:  Maria Elena Gallina; Jianmin Xu; Thomas Dertinger; Adva Aizer; Yaron Shav-Tal; Shimon Weiss
Journal:  Opt Nanoscopy       Date:  2013-02-25

9.  Somatic insulin signaling regulates a germline starvation response in Drosophila egg chambers.

Authors:  K Mahala Burn; Yuko Shimada; Kathleen Ayers; Soumya Vemuganti; Feiyue Lu; Andrew M Hudson; Lynn Cooley
Journal:  Dev Biol       Date:  2014-12-03       Impact factor: 3.582

10.  Cytoplasmic RNA Granules and Viral Infection.

Authors:  Wei-Chih Tsai; Richard E Lloyd
Journal:  Annu Rev Virol       Date:  2014-11       Impact factor: 10.431

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