| Literature DB >> 23166414 |
Mi Kyeong Kim1, Sung Wook Park, Su Kang Kim, Hae Jeong Park, Young Gyu Eun, Kee Hwan Kwon, Jinju Kim.
Abstract
Toll-like receptors (TLRs) single nucleotide polymorphisms (SNPs) were analyzed in patients with papillary thyroid cancer (PTC; n = 133) and their clinicopathologic features and age-matched controls (n = 321) using direct sequencing. PTC patients were divided into subgroups according to size, number, location, extrathyroidal invasion and lymph node metastasis. The two SNPs of TLR2 gene were not associated with the development of PTC. In clinical analysis, two SNPs were associated with location of cancer (rs3804099, P = 0.032, OR, 0.52; 95% CI, 0.28-0.96 in log-additive model; rs3804100, P = 0.039, OR, 0.46, 95% CI, 0.22-0.96 in codominant1 model; P = 0.018, OR, 0.42, 95% CI, 0.21-0.87 in dominant model; P = 0.011, OR, 0.46, 95% CI, 0.25-0.85 in log-additive model). The allele frequencies of two SNPs also showed significant associations with location of cancer (rs3804099, P = 0.046, OR, 0.57, 95% CI, 0.33-0.99 and rs3804100, P = 0.019, OR = 0.52, 95% CI = 0.30-0.90). However, two SNPs were not associated with the clinicopathologic features of PTC. It is suggested that TLR2 polymorphisms may contribute to the clinicopathologic features of PTC, especially the PTC in both lobes.Entities:
Keywords: Clinicopathologic Characteristics; Papillary Thyroid Cancer; Single Nucleotide Polymorphisms; Toll-Like Receptors
Mesh:
Substances:
Year: 2012 PMID: 23166414 PMCID: PMC3492667 DOI: 10.3346/jkms.2012.27.11.1333
Source DB: PubMed Journal: J Korean Med Sci ISSN: 1011-8934 Impact factor: 2.153
Clinical characteristics of the study population
PTC patients having inappropriate clinical data were excluded. Because of PTC patients having inappropriate clinical data, the total number of PTC phenotype are different. PTC, papillary thyroid cancer; No., number of subjects; SD, standard deviation.
Primer sequences for each SNP
SNP, single nucleotide polymorphism; bp, base pair.
Frequencies of genotype and allele of TLR2 in control and patients with papillary thyroid cancer (PTC)
The P values were calculated from logistic regression analyses adjusting sex and age (codominant1, A/A vs A/B; codominant2, A/A vs B/B; dominant A/A vs A/B+B/B; recessive, A/A+A/B vs B/B; log-additive, A/A vs A/B vs B/B). Missing data of genotype were excluded for exact analysis. PTC, papillary thyroid cancer; SNP, single nucleotide polymorphism; OR, odds ratio; CI, confidence interval.
Genotype and allele frequencies of SNPs of TLR2 gene in PTC patients with one lobe and PTC patients with both lobes
The P values were calculated from logistic regression analyses adjusting sex and age (codominant1, A/A vs A/B; codominant2, A/A vs B/B; dominant A/A vs A/B+B/B; recessive, A/A+A/B vs B/B; log-additive, A/A vs A/B vs B/B). Bold numbers mean significance association. Missing data of genotype were excluded for exact analysis. PTC, papillary thyroid cancer; SNP, single nucleotide polymorphism; OR, odds ratio; CI, confidence interval.
Genotype and allele frequencies of SNPs of TLR2 gene in PTC patients with tumor size < 1 cm and PTC patients with tumor size ≥ 1 cm
The P values were calculated from logistic regression analyses adjusting sex and age (codominant1, A/A vs A/B; codominant2, A/A vs B/B; dominant A/A vs A/B+B/B; recessive, A/A+A/B vs B/B; log-additive, A/A vs A/B vs B/B). Missing data of genotype were excluded for exact analysis. PTC, papillary thyroid cancer; SNP, single nucleotide polymorphism; OR, odds ratio; CI, confidence interval.
Genotype and allele frequencies of SNPs of TLR2 gene in PTC patients with unifocality and PTC patients with multifocality
The P values were calculated from logistic regression analyses adjusting sex and age (codominant1, A/A vs A/B; codominant2, A/A vs B/B; dominant A/A vs A/B+B/B; recessive, A/A+A/B vs B/B; log-additive, A/A vs A/B vs B/B). Missing data of genotype were excluded for exact analysis. PTC, papillary thyroid cancer; SNP, single nucleotide polymorphism; OR, odds ratio; CI, confidence interval.