Literature DB >> 23161061

Gene knockout and knockin by zinc-finger nucleases: current status and perspectives.

J Hauschild-Quintern1, B Petersen, G J Cost, H Niemann.   

Abstract

Zinc-finger nucleases (ZFNs) are engineered site-specific DNA cleavage enzymes that may be designed to recognize long target sites and thus cut DNA with high specificity. ZFNs mediate permanent and targeted genetic alteration via induction of a double-strand break at a specific genomic site. Compared to conventional homology-based gene targeting, ZFNs can increase the targeting rate by up to 100,000-fold; gene disruption via mutagenic DNA repair is similarly efficient. The utility of ZFNs has been shown in many organisms, including insects, amphibians, plants, nematodes, and several mammals, including humans. This broad range of tractable species renders ZFNs a useful tool for improving the understanding of complex physiological systems, to produce transgenic animals, cell lines, and plants, and to treat human disease.

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Year:  2012        PMID: 23161061     DOI: 10.1007/s00018-012-1204-1

Source DB:  PubMed          Journal:  Cell Mol Life Sci        ISSN: 1420-682X            Impact factor:   9.261


  67 in total

1.  Transient cold shock enhances zinc-finger nuclease-mediated gene disruption.

Authors:  Yannick Doyon; Vivian M Choi; Danny F Xia; Thuy D Vo; Philip D Gregory; Michael C Holmes
Journal:  Nat Methods       Date:  2010-05-02       Impact factor: 28.547

Review 2.  Retroviral insertional mutagenesis: past, present and future.

Authors:  A G Uren; J Kool; A Berns; M van Lohuizen
Journal:  Oncogene       Date:  2005-11-21       Impact factor: 9.867

3.  Targeted genome modification in mice using zinc-finger nucleases.

Authors:  Iara D Carbery; Diana Ji; Anne Harrington; Victoria Brown; Edward J Weinstein; Lucy Liaw; Xiaoxia Cui
Journal:  Genetics       Date:  2010-07-13       Impact factor: 4.562

4.  Targeted genome editing across species using ZFNs and TALENs.

Authors:  Andrew J Wood; Te-Wen Lo; Bryan Zeitler; Catherine S Pickle; Edward J Ralston; Andrew H Lee; Rainier Amora; Jeffrey C Miller; Elo Leung; Xiangdong Meng; Lei Zhang; Edward J Rebar; Philip D Gregory; Fyodor D Urnov; Barbara J Meyer
Journal:  Science       Date:  2011-06-23       Impact factor: 47.728

5.  Highly efficient endogenous human gene correction using designed zinc-finger nucleases.

Authors:  Fyodor D Urnov; Jeffrey C Miller; Ya-Li Lee; Christian M Beausejour; Jeremy M Rock; Sheldon Augustus; Andrew C Jamieson; Matthew H Porteus; Philip D Gregory; Michael C Holmes
Journal:  Nature       Date:  2005-04-03       Impact factor: 49.962

6.  Highly efficient deletion of FUT8 in CHO cell lines using zinc-finger nucleases yields cells that produce completely nonfucosylated antibodies.

Authors:  Laetitia Malphettes; Yevgeniy Freyvert; Jennifer Chang; Pei-Qi Liu; Edmond Chan; Jeffrey C Miller; Zhe Zhou; Thu Nguyen; Christina Tsai; Andrew W Snowden; Trevor N Collingwood; Philip D Gregory; Gregory J Cost
Journal:  Biotechnol Bioeng       Date:  2010-08-01       Impact factor: 4.530

7.  Biochemical insights into the mechanisms central to the response of mammalian cells to cold stress and subsequent rewarming.

Authors:  Anne Roobol; Martin J Carden; Ray J Newsam; C Mark Smales
Journal:  FEBS J       Date:  2008-11-28       Impact factor: 5.542

8.  Generation of knockout rats with X-linked severe combined immunodeficiency (X-SCID) using zinc-finger nucleases.

Authors:  Tomoji Mashimo; Akiko Takizawa; Birger Voigt; Kazuto Yoshimi; Hiroshi Hiai; Takashi Kuramoto; Tadao Serikawa
Journal:  PLoS One       Date:  2010-01-25       Impact factor: 3.240

9.  Autonomous zinc-finger nuclease pairs for targeted chromosomal deletion.

Authors:  Cem Söllü; Kaweh Pars; Tatjana I Cornu; Stacey Thibodeau-Beganny; Morgan L Maeder; J Keith Joung; Regine Heilbronn; Toni Cathomen
Journal:  Nucleic Acids Res       Date:  2010-08-16       Impact factor: 16.971

10.  Targeted gene correction of α1-antitrypsin deficiency in induced pluripotent stem cells.

Authors:  Kosuke Yusa; S Tamir Rashid; Helene Strick-Marchand; Ignacio Varela; Pei-Qi Liu; David E Paschon; Elena Miranda; Adriana Ordóñez; Nicholas R F Hannan; Foad J Rouhani; Sylvie Darche; Graeme Alexander; Stefan J Marciniak; Noemi Fusaki; Mamoru Hasegawa; Michael C Holmes; James P Di Santo; David A Lomas; Allan Bradley; Ludovic Vallier
Journal:  Nature       Date:  2011-10-12       Impact factor: 49.962

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  11 in total

Review 1.  Recent developments and clinical studies utilizing engineered zinc finger nuclease technology.

Authors:  Young-Il Jo; Hyongbum Kim; Suresh Ramakrishna
Journal:  Cell Mol Life Sci       Date:  2015-06-19       Impact factor: 9.261

Review 2.  Advances in genetic modification of farm animals using zinc-finger nucleases (ZFN).

Authors:  Bjoern Petersen; Heiner Niemann
Journal:  Chromosome Res       Date:  2015-02       Impact factor: 5.239

3.  Derivation and characterization of bovine induced pluripotent stem cells by transposon-mediated reprogramming.

Authors:  Thirumala R Talluri; Dharmendra Kumar; Silke Glage; Wiebke Garrels; Zoltan Ivics; Katharina Debowski; Rüdiger Behr; Heiner Niemann; Wilfried A Kues
Journal:  Cell Reprogram       Date:  2015-04       Impact factor: 1.987

4.  Genomic Knockout of Endogenous Canine P-Glycoprotein in Wild-Type, Human P-Glycoprotein and Human BCRP Transfected MDCKII Cell Lines by Zinc Finger Nucleases.

Authors:  Dominik Gartzke; Jürgen Delzer; Loic Laplanche; Yasuo Uchida; Yutaro Hoshi; Masanori Tachikawa; Tetsuya Terasaki; Jens Sydor; Gert Fricker
Journal:  Pharm Res       Date:  2014-12-19       Impact factor: 4.200

5.  Genetic modification of H2AX renders mesenchymal stromal cell-derived dopamine neurons more resistant to DNA damage and subsequent apoptosis.

Authors:  Peizhou Jiang; Peng Huang; Shu-Hui Yen; Abba C Zubair; Dennis W Dickson
Journal:  Cytotherapy       Date:  2016-10-06       Impact factor: 5.414

Review 6.  Molecular scissors and their application in genetically modified farm animals.

Authors:  Bjoern Petersen; Heiner Niemann
Journal:  Transgenic Res       Date:  2015-01-22       Impact factor: 2.788

7.  TALEN-mediated gene targeting in porcine spermatogonia.

Authors:  Lin Tang; Alla Bondareva; Raquel González; Jose R Rodriguez-Sosa; Daniel F Carlson; Dennis Webster; Scott Fahrenkrug; Ina Dobrinski
Journal:  Mol Reprod Dev       Date:  2018-02-22       Impact factor: 2.609

8.  Simple generation of albino C57BL/6J mice with G291T mutation in the tyrosinase gene by the CRISPR/Cas9 system.

Authors:  Seiya Mizuno; Tra Thi Huong Dinh; Kanako Kato; Saori Mizuno-Iijima; Yoko Tanimoto; Yoko Daitoku; Yoshikazu Hoshino; Masahito Ikawa; Satoru Takahashi; Fumihiro Sugiyama; Ken-ichi Yagami
Journal:  Mamm Genome       Date:  2014-05-31       Impact factor: 2.957

Review 9.  The production of multi-transgenic pigs: update and perspectives for xenotransplantation.

Authors:  Heiner Niemann; Bjoern Petersen
Journal:  Transgenic Res       Date:  2016-01-28       Impact factor: 2.788

Review 10.  Spotting the enemy within: Targeted silencing of foreign DNA in mammalian genomes by the Krüppel-associated box zinc finger protein family.

Authors:  Gernot Wolf; David Greenberg; Todd S Macfarlan
Journal:  Mob DNA       Date:  2015-10-02
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