Literature DB >> 23155187

Inside the black box: starting to uncover the underlying decision rules used in a one-by-one expert assessment of occupational exposure in case-control studies.

David C Wheeler1, Igor Burstyn, Roel Vermeulen, Kai Yu, Susan M Shortreed, Anjoeka Pronk, Patricia A Stewart, Joanne S Colt, Dalsu Baris, Margaret R Karagas, Molly Schwenn, Alison Johnson, Debra T Silverman, Melissa C Friesen.   

Abstract

OBJECTIVES: Evaluating occupational exposures in population-based case-control studies often requires exposure assessors to review each study participant's reported occupational information job-by-job to derive exposure estimates. Although such assessments likely have underlying decision rules, they usually lack transparency, are time consuming and have uncertain reliability and validity. We aimed to identify the underlying rules to enable documentation, review and future use of these expert-based exposure decisions.
METHODS: Classification and regression trees (CART, predictions from a single tree) and random forests (predictions from many trees) were used to identify the underlying rules from the questionnaire responses, and an expert's exposure assignments for occupational diesel exhaust exposure for several metrics: binary exposure probability and ordinal exposure probability, intensity and frequency. Data were split into training (n=10 488 jobs), testing (n=2247) and validation (n=2248) datasets.
RESULTS: The CART and random forest models' predictions agreed with 92-94% of the expert's binary probability assignments. For ordinal probability, intensity and frequency metrics, the two models extracted decision rules more successfully for unexposed and highly exposed jobs (86-90% and 57-85%, respectively) than for low or medium exposed jobs (7-71%).
CONCLUSIONS: CART and random forest models extracted decision rules and accurately predicted an expert's exposure decisions for the majority of jobs, and identified questionnaire response patterns that would require further expert review if the rules were applied to other jobs in the same or different study. This approach makes the exposure assessment process in case-control studies more transparent, and creates a mechanism to efficiently replicate exposure decisions in future studies.

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Year:  2012        PMID: 23155187      PMCID: PMC3975600          DOI: 10.1136/oemed-2012-100918

Source DB:  PubMed          Journal:  Occup Environ Med        ISSN: 1351-0711            Impact factor:   4.402


  12 in total

1.  Development of an asthma specific job exposure matrix and its application in the epidemiological study of genetics and environment in asthma (EGEA).

Authors:  S M Kennedy; N Le Moual; D Choudat; F Kauffmann
Journal:  Occup Environ Med       Date:  2000-09       Impact factor: 4.402

2.  Artificial neural networks and job-specific modules to assess occupational exposure.

Authors:  Jim Black; Geza Benke; Kate Smith; Lin Fritschi
Journal:  Ann Occup Hyg       Date:  2004-09-20

3.  The ghost of methods past: exposure assessment versus job-exposure matrix studies.

Authors:  Igor Burstyn
Journal:  Occup Environ Med       Date:  2010-11-12       Impact factor: 4.402

4.  Occupation and bladder cancer in a population-based case-control study in Northern New England.

Authors:  Joanne S Colt; Margaret R Karagas; Molly Schwenn; Dalsu Baris; Alison Johnson; Patricia Stewart; Castine Verrill; Lee E Moore; Jay Lubin; Mary H Ward; Claudine Samanic; Nathaniel Rothman; Kenneth P Cantor; Laura E Beane Freeman; Alan Schned; Sai Cherala; Debra T Silverman
Journal:  Occup Environ Med       Date:  2010-09-23       Impact factor: 4.402

5.  Questionnaires for collecting detailed occupational information for community-based case control studies.

Authors:  P A Stewart; W F Stewart; J Siemiatycki; E F Heineman; M Dosemeci
Journal:  Am Ind Hyg Assoc J       Date:  1998-01

6.  Exposure assessment--a challenge for occupational epidemiology.

Authors:  T Kauppinen
Journal:  Scand J Work Environ Health       Date:  1996-12       Impact factor: 5.024

7.  Comparison of algorithm-based estimates of occupational diesel exhaust exposure to those of multiple independent raters in a population-based case-control study.

Authors:  Melissa C Friesen; Anjoeka Pronk; David C Wheeler; Yu-Cheng Chen; Sarah J Locke; Dennis D Zaebst; Molly Schwenn; Alison Johnson; Richard Waddell; Dalsu Baris; Joanne S Colt; Debra T Silverman; Patricia A Stewart; Hormuzd A Katki
Journal:  Ann Occup Hyg       Date:  2012-11-25

8.  Obtaining occupational exposure histories in epidemiologic case-control studies.

Authors:  M Gérin; J Siemiatycki; H Kemper; D Bégin
Journal:  J Occup Med       Date:  1985-06

9.  Comparison of two expert-based assessments of diesel exhaust exposure in a case-control study: programmable decision rules versus expert review of individual jobs.

Authors:  Anjoeka Pronk; Patricia A Stewart; Joseph B Coble; Hormuzd A Katki; David C Wheeler; Joanne S Colt; Dalsu Baris; Molly Schwenn; Margaret R Karagas; Alison Johnson; Richard Waddell; Castine Verrill; Sai Cherala; Debra T Silverman; Melissa C Friesen
Journal:  Occup Environ Med       Date:  2012-07-27       Impact factor: 4.402

Review 10.  OccIDEAS: retrospective occupational exposure assessment in community-based studies made easier.

Authors:  Lin Fritschi; Melissa C Friesen; Deborah Glass; Geza Benke; Jennifer Girschik; Troy Sadkowsky
Journal:  J Environ Public Health       Date:  2009-10-15
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  15 in total

1.  Combining Decision Rules from Classification Tree Models and Expert Assessment to Estimate Occupational Exposure to Diesel Exhaust for a Case-Control Study.

Authors:  Melissa C Friesen; David C Wheeler; Roel Vermeulen; Sarah J Locke; Dennis D Zaebst; Stella Koutros; Anjoeka Pronk; Joanne S Colt; Dalsu Baris; Margaret R Karagas; Nuria Malats; Molly Schwenn; Alison Johnson; Karla R Armenti; Nathanial Rothman; Patricia A Stewart; Manolis Kogevinas; Debra T Silverman
Journal:  Ann Occup Hyg       Date:  2016-01-04

2.  Using hierarchical cluster models to systematically identify groups of jobs with similar occupational questionnaire response patterns to assist rule-based expert exposure assessment in population-based studies.

Authors:  Melissa C Friesen; Susan M Shortreed; David C Wheeler; Igor Burstyn; Roel Vermeulen; Anjoeka Pronk; Joanne S Colt; Dalsu Baris; Margaret R Karagas; Molly Schwenn; Alison Johnson; Karla R Armenti; Debra T Silverman; Kai Yu
Journal:  Ann Occup Hyg       Date:  2014-12-03

3.  Developing a job-exposure matrix with exposure uncertainty from expert elicitation and data modeling.

Authors:  Heidi J Fischer; Ximena P Vergara; Michael Yost; Michael Silva; David A Lombardi; Leeka Kheifets
Journal:  J Expo Sci Environ Epidemiol       Date:  2015-05-13       Impact factor: 5.563

4.  Comparison of ordinal and nominal classification trees to predict ordinal expert-based occupational exposure estimates in a case-control study.

Authors:  David C Wheeler; Kellie J Archer; Igor Burstyn; Kai Yu; Patricia A Stewart; Joanne S Colt; Dalsu Baris; Margaret R Karagas; Molly Schwenn; Alison Johnson; Karla Armenti; Debra T Silverman; Melissa C Friesen
Journal:  Ann Occup Hyg       Date:  2014-11-27

Review 5.  Challenges and Opportunities for Occupational Epidemiology in the Twenty-first Century.

Authors:  L T Stayner; J J Collins; Y L Guo; D Heederik; M Kogevinas; K Steenland; C Wesseling; P A Demers
Journal:  Curr Environ Health Rep       Date:  2017-09

Review 6.  Use and Reliability of Exposure Assessment Methods in Occupational Case-Control Studies in the General Population: Past, Present, and Future.

Authors:  Calvin B Ge; Melissa C Friesen; Hans Kromhout; Susan Peters; Nathaniel Rothman; Qing Lan; Roel Vermeulen
Journal:  Ann Work Expo Health       Date:  2018-11-12       Impact factor: 2.179

7.  Comparison of algorithm-based estimates of occupational diesel exhaust exposure to those of multiple independent raters in a population-based case-control study.

Authors:  Melissa C Friesen; Anjoeka Pronk; David C Wheeler; Yu-Cheng Chen; Sarah J Locke; Dennis D Zaebst; Molly Schwenn; Alison Johnson; Richard Waddell; Dalsu Baris; Joanne S Colt; Debra T Silverman; Patricia A Stewart; Hormuzd A Katki
Journal:  Ann Occup Hyg       Date:  2012-11-25

Review 8.  Using Decision Rules to Assess Occupational Exposure in Population-Based Studies.

Authors:  Jean-François Sauvé; Melissa C Friesen
Journal:  Curr Environ Health Rep       Date:  2019-09

9.  Systematically extracting metal- and solvent-related occupational information from free-text responses to lifetime occupational history questionnaires.

Authors:  Melissa C Friesen; Sarah J Locke; Carina Tornow; Yu-Cheng Chen; Dong-Hee Koh; Patricia A Stewart; Mark Purdue; Joanne S Colt
Journal:  Ann Occup Hyg       Date:  2014-03-03

10.  Retrospective Assessment of Occupational Exposures for the GENEVA Study of ALS among Military Veterans.

Authors:  Anila Bello; Susan R Woskie; Rebecca Gore; Dale P Sandler; Silke Schmidt; Freya Kamel
Journal:  Ann Work Expo Health       Date:  2017-04-01       Impact factor: 2.179

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