Literature DB >> 2315305

Presence of a vertebrate fibrinogen-like sequence in an echinoderm.

X Xu1, R F Doolittle.   

Abstract

Sequence comparisons of the three homologous polypeptide chains that compose vertebrate fibrinogens imply that the molecule evolved before the divergence of vertebrates and invertebrates, but, to our knowledge, no protein resembling vertebrate fibrinogen has even been reported from an invertebrate. We used primers based on sequences conserved between lamprey and human fibrinogens and applied the polymerase chain reaction (PCR) to cDNA preparations from various invertebrates. A fibrinogen-like sequence was identified in cDNA prepared from the soft tissues of a sea cucumber, parastichopus parvimensis. The PCR-prepared material was then used to clone two closely related mRNA sequences from a sea cucumber soft tissue cDNA library. The putative fibrinogen-related proteins, FReP-A and FReP-B, correspond to the carboxyl-terminal two-thirds of vertebrate fibrinogen beta and gamma chains. Computer comparisons of various fibrinogen-related sequences indicate that the sea cucumber proteins diverged before the beta-gamma gene duplication.

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Year:  1990        PMID: 2315305      PMCID: PMC53633          DOI: 10.1073/pnas.87.6.2097

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  22 in total

1.  Transcript encoded on the opposite strand of the human steroid 21-hydroxylase/complement component C4 gene locus.

Authors:  Y Morel; J Bristow; S E Gitelman; W L Miller
Journal:  Proc Natl Acad Sci U S A       Date:  1989-09       Impact factor: 11.205

2.  Amino acid sequence of the beta chain of human fibrinogen: homology with the gamma chain.

Authors:  K W Watt; T Takagi; R F Doolittle
Journal:  Proc Natl Acad Sci U S A       Date:  1978-04       Impact factor: 11.205

3.  Sodium dodecyl sulfate-polyacrylamide gel electrophoresis studies on lobster fibrinogen and fibrin.

Authors:  R F Doolittle; G M Fuller
Journal:  Biochim Biophys Acta       Date:  1972-05-18

4.  A method for isolation of intact, translationally active ribonucleic acid.

Authors:  G Cathala; J F Savouret; B Mendez; B L West; M Karin; J A Martial; J D Baxter
Journal:  DNA       Date:  1983

Review 5.  Fibrinogen and fibrin.

Authors:  R F Doolittle
Journal:  Annu Rev Biochem       Date:  1984       Impact factor: 23.643

6.  A technique for radiolabeling DNA restriction endonuclease fragments to high specific activity.

Authors:  A P Feinberg; B Vogelstein
Journal:  Anal Biochem       Date:  1983-07-01       Impact factor: 3.365

7.  The structure and evolution of vertebrate fibrinogen.

Authors:  R F Doolittle
Journal:  Ann N Y Acad Sci       Date:  1983-06-27       Impact factor: 5.691

8.  Sequence homology between gamma-chain and beta-chain in human fibrin.

Authors:  A Henschen; F Lottspeich
Journal:  Thromb Res       Date:  1977-12       Impact factor: 3.944

9.  DNA sequencing with chain-terminating inhibitors.

Authors:  F Sanger; S Nicklen; A R Coulson
Journal:  Proc Natl Acad Sci U S A       Date:  1977-12       Impact factor: 11.205

10.  A cDNA clone for cytotactin contains sequences similar to epidermal growth factor-like repeats and segments of fibronectin and fibrinogen.

Authors:  F S Jones; M P Burgoon; S Hoffman; K L Crossin; B A Cunningham; G M Edelman
Journal:  Proc Natl Acad Sci U S A       Date:  1988-04       Impact factor: 11.205

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  20 in total

1.  cDNA sequence of a second fibrinogen alpha chain in lamprey: an archetypal version alignable with full-length beta and gamma chains.

Authors:  Y Pan; R F Doolittle
Journal:  Proc Natl Acad Sci U S A       Date:  1992-03-15       Impact factor: 11.205

Review 2.  The primary role of fibrinogen-related proteins in invertebrates is defense, not coagulation.

Authors:  Patrick C Hanington; Si-Ming Zhang
Journal:  J Innate Immun       Date:  2010-11-09       Impact factor: 7.349

3.  Immune-related genes associated with intestinal tissue in the sea cucumber Holothuria glaberrima.

Authors:  Francisco Ramírez-Gómez; Pablo A Ortíz-Pineda; Carmencita Rojas-Cartagena; Edna C Suárez-Castillo; José E García-Arrarás; José E García-Ararrás
Journal:  Immunogenetics       Date:  2007-12-19       Impact factor: 2.846

4.  New nucleotide sequence data on the EMBL File Server.

Authors: 
Journal:  Nucleic Acids Res       Date:  1990-07-11       Impact factor: 16.971

Review 5.  Correlating structure and function during the evolution of fibrinogen-related domains.

Authors:  Russell F Doolittle; Kyle McNamara; Kevin Lin
Journal:  Protein Sci       Date:  2012-12       Impact factor: 6.725

6.  beta2 knockout mice develop parenchymal iron overload: A putative role for class I genes of the major histocompatibility complex in iron metabolism.

Authors:  B E Rothenberg; J R Voland
Journal:  Proc Natl Acad Sci U S A       Date:  1996-02-20       Impact factor: 11.205

7.  Bipartite mRNA for chicken alpha-fibrinogen potentially encodes an amino acid sequence homologous to beta- and gamma-fibrinogens.

Authors:  L Weissbach; G Grieninger
Journal:  Proc Natl Acad Sci U S A       Date:  1990-07       Impact factor: 11.205

Review 8.  Tenascins, a growing family of extracellular matrix proteins.

Authors:  R Chiquet-Ehrismann
Journal:  Experientia       Date:  1995-09-29

9.  Representation of an immune responsive gene family encoding fibrinogen-related proteins in the freshwater mollusc Biomphalaria glabrata, an intermediate host for Schistosoma mansoni.

Authors:  Si-Ming Zhang; Eric S Loker
Journal:  Gene       Date:  2004-10-27       Impact factor: 3.688

10.  LPS-induced genes in intestinal tissue of the sea cucumber Holothuria glaberrima.

Authors:  Francisco Ramírez-Gómez; Pablo A Ortiz-Pineda; Gabriela Rivera-Cardona; José E García-Arrarás
Journal:  PLoS One       Date:  2009-07-08       Impact factor: 3.240

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