Literature DB >> 1549566

cDNA sequence of a second fibrinogen alpha chain in lamprey: an archetypal version alignable with full-length beta and gamma chains.

Y Pan1, R F Doolittle.   

Abstract

The message for a second fibrinogen alpha chain has been cloned from a lamprey liver cDNA library. The sequence is unique in that the amino-terminal half is homologous to all other known alpha chains, including another from lamprey, but its carboxyl-terminal half is homologous to the carboxyl-terminal portions of beta and gamma chains, segments that compose the distal globular regions of fibrinogen. The structural pattern of this newly discovered alpha chain suggests that it could be a direct descendant of the archetypal chain that existed prior to the gene duplications that led to unique beta and gamma chains and before the dislocating events that gave rise to contemporary alpha chains.

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Year:  1992        PMID: 1549566      PMCID: PMC48597          DOI: 10.1073/pnas.89.6.2066

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  28 in total

1.  Spacing differentiation in the developing Drosophila eye: a fibrinogen-related lateral inhibitor encoded by scabrous.

Authors:  N E Baker; M Mlodzik; G M Rubin
Journal:  Science       Date:  1990-12-07       Impact factor: 47.728

2.  Enzymatic amplification of beta-globin genomic sequences and restriction site analysis for diagnosis of sickle cell anemia.

Authors:  R K Saiki; S Scharf; F Faloona; K B Mullis; G T Horn; H A Erlich; N Arnheim
Journal:  Science       Date:  1985-12-20       Impact factor: 47.728

3.  Nearest neighbor procedure for relating progressively aligned amino acid sequences.

Authors:  R F Doolittle; D F Feng
Journal:  Methods Enzymol       Date:  1990       Impact factor: 1.600

4.  Transcript encoded on the opposite strand of the human steroid 21-hydroxylase/complement component C4 gene locus.

Authors:  Y Morel; J Bristow; S E Gitelman; W L Miller
Journal:  Proc Natl Acad Sci U S A       Date:  1989-09       Impact factor: 11.205

5.  A new method for predicting signal sequence cleavage sites.

Authors:  G von Heijne
Journal:  Nucleic Acids Res       Date:  1986-06-11       Impact factor: 16.971

6.  Structure of a cytotoxic T-lymphocyte-specific gene shows a strong homology to fibrinogen beta and gamma chains.

Authors:  T Koyama; L R Hall; W G Haser; S Tonegawa; H Saito
Journal:  Proc Natl Acad Sci U S A       Date:  1987-03       Impact factor: 11.205

7.  Estrogen regulation of Xenopus laevis gamma-fibrinogen gene expression.

Authors:  R L Pastori; J E Moskaitis; L H Smith; D R Schoenberg
Journal:  Biochemistry       Date:  1990-03-13       Impact factor: 3.162

8.  CHARACTERIZATION OF LAMPREY FIBRINOPEPTIDES.

Authors:  R F DOOLITTLE
Journal:  Biochem J       Date:  1965-03       Impact factor: 3.857

9.  DNA sequencing with chain-terminating inhibitors.

Authors:  F Sanger; S Nicklen; A R Coulson
Journal:  Proc Natl Acad Sci U S A       Date:  1977-12       Impact factor: 11.205

10.  The structure of human thrombospondin, an adhesive glycoprotein with multiple calcium-binding sites and homologies with several different proteins.

Authors:  J Lawler; R O Hynes
Journal:  J Cell Biol       Date:  1986-11       Impact factor: 10.539

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  14 in total

1.  A detailed consideration of a principal domain of vertebrate fibrinogen and its relatives.

Authors:  R F Doolittle
Journal:  Protein Sci       Date:  1992-12       Impact factor: 6.725

2.  Crystal structure of a recombinant alphaEC domain from human fibrinogen-420.

Authors:  G Spraggon; D Applegate; S J Everse; J Z Zhang; L Veerapandian; C Redman; R F Doolittle; G Grieninger
Journal:  Proc Natl Acad Sci U S A       Date:  1998-08-04       Impact factor: 11.205

3.  MultiCoil: a program for predicting two- and three-stranded coiled coils.

Authors:  E Wolf; P S Kim; B Berger
Journal:  Protein Sci       Date:  1997-06       Impact factor: 6.725

Review 4.  Correlating structure and function during the evolution of fibrinogen-related domains.

Authors:  Russell F Doolittle; Kyle McNamara; Kevin Lin
Journal:  Protein Sci       Date:  2012-12       Impact factor: 6.725

5.  Bioinformatic Characterization of Genes and Proteins Involved in Blood Clotting in Lampreys.

Authors:  Russell F Doolittle
Journal:  J Mol Evol       Date:  2015-10-05       Impact factor: 2.395

6.  The minor form alpha' chain from lamprey fibrinogen is rapidly crosslinked during clotting.

Authors:  E Shipwash; Y Pan; R F Doolittle
Journal:  Proc Natl Acad Sci U S A       Date:  1995-02-14       Impact factor: 11.205

7.  Fib420: a normal human variant of fibrinogen with two extended alpha chains.

Authors:  Y Fu; G Grieninger
Journal:  Proc Natl Acad Sci U S A       Date:  1994-03-29       Impact factor: 11.205

8.  Evolution of prothrombin: isolation and characterization of the cDNAs encoding chicken and hagfish prothrombin.

Authors:  D K Banfield; D M Irwin; D A Walz; R T MacGillivray
Journal:  J Mol Evol       Date:  1994-02       Impact factor: 2.395

9.  Functional analysis of the fibrinogen-related scabrous gene from Drosophila melanogaster identifies potential effector and stimulatory protein domains.

Authors:  E C Lee; S Y Yu; X Hu; M Mlodzik; N E Baker
Journal:  Genetics       Date:  1998-10       Impact factor: 4.562

10.  The evolution of vertebrate blood coagulation as viewed from a comparison of puffer fish and sea squirt genomes.

Authors:  Yong Jiang; Russell F Doolittle
Journal:  Proc Natl Acad Sci U S A       Date:  2003-06-13       Impact factor: 11.205

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