Literature DB >> 23152303

Reverse transcription loop-mediated isothermal amplification for rapid detection of the newly emerged poultry Flavivirus.

Zhaolong Li1, Shaoying Chen, Shao Wang, Shilong Chen, Fengqian Lin.   

Abstract

Poultry Flavivirus (PF) was a recently emerged virus with high morbidity rates and mortality rates in China. It is the causative agent of egg drop syndrome at present. Development of the reverse transcription loop-mediated isothermal amplification (RT-LAMP) assay was the most efficient way to prevent and control the PF disease. The assay was performed at 64 °C for 45 min, using six specific primers that recognized eight targets of the PF E gene. The RT-LAMP assay, compared to conventional reverse transcription polymerase chain reaction, has 100-fold-greater sensitivity, with a detection limit of 1 × 10(-3) copies per μL RNA and no cross-reaction with poultry other viruses. The RT-LAMP assay is a valuable tool for detected PF without requiring any sophisticated equipment, and the detection has potential usefulness for clinical diagnosis in the field.

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Year:  2012        PMID: 23152303     DOI: 10.1007/s12223-012-0204-8

Source DB:  PubMed          Journal:  Folia Microbiol (Praha)        ISSN: 0015-5632            Impact factor:   2.099


  16 in total

1.  Loop-mediated isothermal amplification of DNA.

Authors:  T Notomi; H Okayama; H Masubuchi; T Yonekawa; K Watanabe; N Amino; T Hase
Journal:  Nucleic Acids Res       Date:  2000-06-15       Impact factor: 16.971

2.  Real-time reverse transcription loop-mediated isothermal amplification for rapid detection of West Nile virus.

Authors:  Manmohan Parida; Guillermo Posadas; Shingo Inoue; Futoshi Hasebe; Kouichi Morita
Journal:  J Clin Microbiol       Date:  2004-01       Impact factor: 5.948

3.  Loop-mediated isothermal amplification for rapid and reliable diagnosis of tuberculous meningitis.

Authors:  Khushboo J Nagdev; Rajpal S Kashyap; Manmohan M Parida; Rajkumar C Kapgate; Hemant J Purohit; Girdhar M Taori; Hatim F Daginawala
Journal:  J Clin Microbiol       Date:  2011-03-16       Impact factor: 5.948

4.  Fast duplex one-step reverse transcriptase PCR for rapid differential detection of West Nile and Japanese encephalitis viruses.

Authors:  Jung-Yong Yeh; Ji-Hye Lee; Hyun-Ji Seo; Jee-Yong Park; Jin-San Moon; In-Soo Cho; Joong-Bok Lee; Seung-Yong Park; Chang-Seon Song; In-Soo Choi
Journal:  J Clin Microbiol       Date:  2010-09-15       Impact factor: 5.948

5.  Sensitive and specific detection of Yersinia pseudotuberculosis by loop-mediated isothermal amplification.

Authors:  Tomoko Horisaka; Kayoko Fujita; Taketoshi Iwata; Aya Nakadai; Alexandre T Okatani; Tetsuya Horikita; Takahide Taniguchi; Eiichi Honda; Yuichi Yokomizo; Hideki Hayashidani
Journal:  J Clin Microbiol       Date:  2004-11       Impact factor: 5.948

6.  Development and evaluation of a loop-mediated isothermal amplification method for rapid diagnosis of Bordetella pertussis infection.

Authors:  Kazunari Kamachi; Hiromi Toyoizumi-Ajisaka; Kohei Toda; Sann Chan Soeung; Svay Sarath; Ya Nareth; Yoshinobu Horiuchi; Kazunobu Kojima; Motohide Takahashi; Yoshichika Arakawa
Journal:  J Clin Microbiol       Date:  2006-05       Impact factor: 5.948

7.  Evaluation of a loop-mediated isothermal amplification method using fecal specimens for differential detection of Taenia species from humans.

Authors:  Agathe Nkouawa; Yasuhito Sako; Tiaoying Li; Xingwang Chen; Toni Wandra; I Kadek Swastika; Minoru Nakao; Tetsuya Yanagida; Kazuhiro Nakaya; Dongchuan Qiu; Akira Ito
Journal:  J Clin Microbiol       Date:  2010-07-14       Impact factor: 5.948

8.  A one-step reverse transcription loop-mediated isothermal amplification for detection and discrimination of infectious bursal disease virus.

Authors:  Yongqiang Wang; Zhonghui Kang; Honglei Gao; Yulong Gao; Liting Qin; Huan Lin; Fei Yu; Xiaole Qi; Xiaomei Wang
Journal:  Virol J       Date:  2011-03-08       Impact factor: 4.099

9.  Establishing a TaqMan-based real-time PCR assay for the rapid detection and quantification of the newly emerged duck Tembusu virus.

Authors:  Liping Yan; Pixi Yan; Jiewen Zhou; Qiaoyang Teng; Zejun Li
Journal:  Virol J       Date:  2011-10-07       Impact factor: 4.099

10.  Specific, simple and rapid detection of porcine circovirus type 2 using the loop-mediated isothermal amplification method.

Authors:  Kai Zhao; Wei Shi; Fangting Han; Yan Xu; Lianlong Zhu; Yong Zou; Xiao Wu; Hong Zhu; Furong Tan; Shiru Tao; Xueming Tang
Journal:  Virol J       Date:  2011-03-18       Impact factor: 4.099

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