| Literature DB >> 23144854 |
Juntian Lang1, Xicheng Song, Jinwei Cheng, Shuwei Zhao, Jingping Fan.
Abstract
BACKGROUND AND AIMS: The Glutathione S-transferase P1 (GSTP1) polymorphism have been considered a risk modifier for developing head and neck cancer (HNC) in many studies; however, the results of such studies are inconsistent. The aim of this study was to evaluate the possible association between the GSTP1 Ile105Val polymorphism and risk of HNC.Entities:
Mesh:
Substances:
Year: 2012 PMID: 23144854 PMCID: PMC3492338 DOI: 10.1371/journal.pone.0048132
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Figure 1The flow diagram of included/excluded studies.
Characteristics of eligible studies.
| Author | Year | Country | Ethnicity | Genotyping Method | Tumor Site | Source of Control | Sample Size (case/control) | Matching | HWE | ||
| Ruwali M | 2011 | India | Asian | PCR-RFLP | Head & Neck | HB | 500/500 | Age/Gender/Race | Y | ||
| Karen-Ng LP | 2011 | Malaysia | Asian | PCR-RFLP | Oral Cavity | HB | 115/116 | None | UK | ||
| Chen MK | 2010 | China | Asian | PCR-RFLP | Oral Cavity | HB | 164/274 | Age/Gender/Race | Y | ||
| Ruwali M | 2009 | India | Asian | PCR | Head & Neck | HB | 350/350 | Age/Gender/Race | Y | ||
| Singh M | 2008 | India | Asian | PCR | Head & Neck | HB | 175/200 | Age/Gender | N | ||
| Datta S | 2007 | India | Asian | PCR-RFLP | Oral Cavity | HB | 307/209 | Smoke | Y | ||
| Cho CG | 2006 | Korea | Asian | PCR | Head & Neck | HB | 294/333 | UK | Y | ||
| Cheng YJ | 2003 | China | Asian | PCR-RFLP | Nasopharynx | PB | 264/323 | UK | Y | ||
| Katoh T | 1999 | Japan | Asian | PCR-RFLP | Oral Cavity | HB | 83/122 | UK | N | ||
| Morita S | 1999 | Japan | Asian | PCR-RFLP | Head & Neck | PB | 145/164 | None | Y | ||
| Soya SS | 2007 | India | Asian | PCR-RFLP | Head & Neck | HB | 408/222 | Age/Gender/Race | Y | ||
| Oude Ophuis MB | 2003 | Netherland | Caucasian | PCR-RFLP | Head & Neck | HB | 235/285 | Age | Y | ||
| Kelders WP | 2002 | Netherland | UK | PCR-RFLP | Head & Neck | HB | 85/51 | UK | Y | ||
| McWilliams JE | 2000 | USA | Caucasian | PCR-RFLP | Head & Neck | HB | 146/124 | Race/Alcohol | Y | ||
| Park JY | 1999 | USA | Caucasian + American | PCR-RFLP | Oral Cavity | HB | 157/260 | UK | N | ||
| Jourenkova-MN | 1999 | Europe | Caucasian | PCR-RFLP | Oral Cavity | HB | 121/172 | Age/Gender/Race/Smoke | Y | ||
| Jourenkova-MN | 1999 | France | Caucasian | PCR-RFLP | Larynx | HB | 129/172 | UK | Y | ||
| Matthias C | 1998 | Germany | Caucasian | PCR-RFLP | Head & Neck | HB | 380/180 | Race | N | ||
| To-Figueras J | 2002 | Spain | Caucasian | PCR-RFLP | Larynx | HB | 204/203 | None | Y | ||
| Soucek P | 2010 | Czech and Poland | Caucasian | PCR-RFLP | Head & Neck | PB | 116/122 | Age/Gender/Alcohol | Y | ||
| Reszka E | 2008 | Poland | Caucasian | PCR-RFLP | Head & Neck | PB | 127/151 | Gender/Alcohol/Occupation | UK | ||
| Harth V | 2008 | Germany | Caucasian | RT-PCR | Head & Neck | HB | 312/300 | UK | Y | ||
| Evans AJ | 2004 | USA | Caucasian | PCR-RFLP | Head & Neck | PB | 283/208 | None | Y | ||
| Leichsenring A | 2006 | Brazil | UK | PCR-RFLP | Oral Cavity | HB | 72/60 | Gender | Y | ||
| Hataqima A | 2008 | Brazil | White+Black | PCR-RFLP | Oral Cavity | HB | 231/212 | Age/Gender/Race | Y | ||
| Peters ES | 2006 | USA | White | PCR-RFLP | Head & Neck | PB | 690/748 | Age/Gender | Y | ||
| Amador AG | 2002 | USA | White | PCR-RFLP | Head & Neck | HB | 137/99 | UK | N | ||
| Olshan AF | 2006 | USA | White | PCR-RFLP | Head & Neck | HB | 172/193 | UK | Y | ||
male only;
Brazilian;
majority is White;
HWE, Hardy–Weinberg equilibrium; PCR-RFLP, polymerase chain reaction–restriction fragment length polymorphism; HB: Hospital based; PB: Population based; UK: Unknown or Unstated; Smoke: Tobacco consumption; Alcohol: Alcohol consumption. RT-PCR, Real-time–polymerase chain reaction.
13], [31], [36], [44], [45] may attribute to the major sources of heterogeneity. Further stratified meta-analysis is needed to perform.
Figure 2Forest plot with a random-effect model for GSTP1 Ile105Val polymorphism and risk for HNC.
The center of each square represents the OR value, the area of each square is proportional to the sample size and thus the weight of the corresponding study, and the horizontal short line indicates the 95% confidence interval. The pooled OR is represented by the diamond. (Test for heterogeneity: chi2 = 38.75, df = 27, p = 0.067. Test for overall effect: z = 0.02, p = 0.984).
Stratified Meta-analysis and Meta-regression Analysis of Heterogeneity.
| Stratification | N | Meta-regression | OR | 95% CI | P value |
| Overall | 28 | I2=30.3% | 1.00 | 0.921.10 | 0.984 |
| Tumor site | P=0.157 (I2 res=26.1%) | ||||
| Mixed HNC | 13 | 0.94 | 0.851.05 | 0.267 | |
| Oral/Oropharynx | 12 | 1.10 | 0.901.33 | 0.355 | |
| Larynx | 6 | 0.87 | 0.691.11 | 0.260 | |
| Nasopharynx | 1 | 1.13 | 0.791.61 | 0.742 | |
| Ethnicity | P=0.208 (I2 res=28.4%) | ||||
| Asian | 11 | 0.94 | 0.791.11 | 0.451 | |
| Caucasian | 11 | 1.05 | 0.931.18 | 0.441 | |
| Other | 6 | 1.05 | 0.901.22 | 0.549 | |
| Source of control | P=0.894 (I2 res=32.9%) | ||||
| Hospital-based | 22 | 1.00 | 0.901.12 | 0.941 | |
| Population-based | 6 | 1.02 | 0.891.18 | 0.762 | |
| Publication year | P=0.005 (I2 res=8.2%) | ||||
| Before 2005 | 14 | 1.12 | 0.991.26 | 0.066 | |
| 2005 and after | 14 | 0.92 | 0.821.03 | 0.142 | |
| Sample Size | P=0.363 (I2 res=31.3%) | ||||
| 300 | 21 | 1.02 | 0.911.14 | 0.714 | |
| 300 | 7 | 0.97 | 0.831.13 | 0.686 | |
| HWE | P=0.974 (I2 res=32.8%) | ||||
| Yes | 21 | 1.00 | 0.911.09 | 0.933 | |
| No | 7 | 1.01 | 0.781.30 | 0.972 |
Meta-regression indicates the between-study variance.
Includes studies without enough data to calculate HWE.
N, number; OR, odds ratio; 95%CI, confidence interval; “I2” indicates variation in OR attributable to heterogeneity; “I2 res” in the parentheses indicates residual variation due to heterogeneity of each factor; HWE, Hardy–Weinberg equilibrium.
Figure 3Begg’s funnel plot for publication bias assessment.
Each hollow cycle represents a separate study for the indicated association.