Literature DB >> 23143872

Structural insights into the assembly of human translesion polymerase complexes.

Wei Xie1, Xuan Yang, Min Xu, Tao Jiang.   

Abstract

In addition to DNA repair pathways, cells utilize translesion DNA synthesis (TLS) to bypass DNA lesions during replication. During TLS, Y-family DNA polymerase (Polη, Polκ, Polı and Rev1) inserts specific nucleotide opposite preferred DNA lesions, and then Polζ consisting of two subunits, Rev3 and Rev7, carries out primer extension. Here, we report the complex structures of Rev3-Rev7-Rev1(CTD) and Rev3-Rev7-Rev1(CTD)-Polκ(RIR). These two structures demonstrate that Rev1(CTD) contains separate binding sites for Polκ and Rev7. Our BIAcore experiments provide additional support for the notion that the interaction between Rev3 and Rev7 increases the affinity of Rev7 and Rev1. We also verified through FRET experiment that Rev1, Rev3, Rev7 and Polκ form a stable quaternary complex in vivo, thereby suggesting an efficient switching mechanism where the "inserter" polymerase can be immediately replaced by an "extender" polymerase within the same quaternary complex.

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Year:  2012        PMID: 23143872      PMCID: PMC4875464          DOI: 10.1007/s13238-012-2102-x

Source DB:  PubMed          Journal:  Protein Cell        ISSN: 1674-800X            Impact factor:   14.870


  58 in total

1.  Crystal structure of the catalytic core of human DNA polymerase kappa.

Authors:  Sacha N Uljon; Robert E Johnson; Thomas A Edwards; Satya Prakash; Louise Prakash; Aneel K Aggarwal
Journal:  Structure       Date:  2004-08       Impact factor: 5.006

2.  Structural basis of Rev1-mediated assembly of a quaternary vertebrate translesion polymerase complex consisting of Rev1, heterodimeric polymerase (Pol) ζ, and Pol κ.

Authors:  Jessica Wojtaszek; Chul-Jin Lee; Sanjay D'Souza; Brenda Minesinger; Hyungjin Kim; Alan D D'Andrea; Graham C Walker; Pei Zhou
Journal:  J Biol Chem       Date:  2012-08-02       Impact factor: 5.157

3.  Stalled Polη at its cognate substrate initiates an alternative translesion synthesis pathway via interaction with REV1.

Authors:  Wakana Ito; Masayuki Yokoi; Nobutaka Sakayoshi; Yasutaka Sakurai; Jun-Ichi Akagi; Hiroshi Mitani; Fumio Hanaoka
Journal:  Genes Cells       Date:  2012-02       Impact factor: 1.891

4.  Complex formation with Rev1 enhances the proficiency of Saccharomyces cerevisiae DNA polymerase zeta for mismatch extension and for extension opposite from DNA lesions.

Authors:  Narottam Acharya; Robert E Johnson; Satya Prakash; Louise Prakash
Journal:  Mol Cell Biol       Date:  2006-10-09       Impact factor: 4.272

5.  Unconventional ubiquitin recognition by the ubiquitin-binding motif within the Y family DNA polymerases iota and Rev1.

Authors:  Martha G Bomar; Sanjay D'Souza; Marzena Bienko; Ivan Dikic; Graham C Walker; Pei Zhou
Journal:  Mol Cell       Date:  2010-02-12       Impact factor: 17.970

Review 6.  DNA polymerase zeta and the control of DNA damage induced mutagenesis in eukaryotes.

Authors:  C W Lawrence; D C Hinkle
Journal:  Cancer Surv       Date:  1996

7.  Complex formation of yeast Rev1 and Rev7 proteins: a novel role for the polymerase-associated domain.

Authors:  Narottam Acharya; Lajos Haracska; Robert E Johnson; Ildiko Unk; Satya Prakash; Louise Prakash
Journal:  Mol Cell Biol       Date:  2005-11       Impact factor: 4.272

8.  Mouse Rev1 protein interacts with multiple DNA polymerases involved in translesion DNA synthesis.

Authors:  Caixia Guo; Paula L Fischhaber; Margaret J Luk-Paszyc; Yuji Masuda; Jing Zhou; Kenji Kamiya; Caroline Kisker; Errol C Friedberg
Journal:  EMBO J       Date:  2003-12-15       Impact factor: 11.598

Review 9.  Y-family DNA polymerases and their role in tolerance of cellular DNA damage.

Authors:  Julian E Sale; Alan R Lehmann; Roger Woodgate
Journal:  Nat Rev Mol Cell Biol       Date:  2012-02-23       Impact factor: 94.444

10.  Regulation of Rev1 by the Fanconi anemia core complex.

Authors:  Hyungjin Kim; Kailin Yang; Donniphat Dejsuphong; Alan D D'Andrea
Journal:  Nat Struct Mol Biol       Date:  2012-01-22       Impact factor: 15.369

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  20 in total

Review 1.  Translesion DNA polymerases in eukaryotes: what makes them tick?

Authors:  Alexandra Vaisman; Roger Woodgate
Journal:  Crit Rev Biochem Mol Biol       Date:  2017-03-09       Impact factor: 8.250

2.  Comparative genomics of HORMA domain-containing proteins in prokaryotes and eukaryotes.

Authors:  Zainab M Almutairi
Journal:  Cell Cycle       Date:  2018-12-04       Impact factor: 4.534

3.  Human Pol ζ purified with accessory subunits is active in translesion DNA synthesis and complements Pol η in cisplatin bypass.

Authors:  Young-Sam Lee; Mark T Gregory; Wei Yang
Journal:  Proc Natl Acad Sci U S A       Date:  2014-01-21       Impact factor: 11.205

4.  p31comet and TRIP13 recycle Rev7 to regulate DNA repair.

Authors:  Kevin D Corbett
Journal:  Proc Natl Acad Sci U S A       Date:  2020-10-29       Impact factor: 11.205

5.  REV7 has a dynamic adaptor region to accommodate small GTPase RAN/Shigella IpaB ligands, and its activity is regulated by the RanGTP/GDP switch.

Authors:  Xin Wang; Nomi Pernicone; Limor Pertz; Deping Hua; Tianqing Zhang; Tamar Listovsky; Wei Xie
Journal:  J Biol Chem       Date:  2019-09-04       Impact factor: 5.157

Review 6.  The Rev1-Polζ translesion synthesis mutasome: Structure, interactions and inhibition.

Authors:  Alessandro A Rizzo; Dmitry M Korzhnev
Journal:  Enzymes       Date:  2019-08-09

7.  Interaction between the Rev1 C-Terminal Domain and the PolD3 Subunit of Polζ Suggests a Mechanism of Polymerase Exchange upon Rev1/Polζ-Dependent Translesion Synthesis.

Authors:  Yulia Pustovalova; Mariana T Q Magalhães; Sanjay D'Souza; Alessandro A Rizzo; George Korza; Graham C Walker; Dmitry M Korzhnev
Journal:  Biochemistry       Date:  2016-03-24       Impact factor: 3.162

8.  Dynamic feature of mitotic arrest deficient 2-like protein 2 (MAD2L2) and structural basis for its interaction with chromosome alignment-maintaining phosphoprotein (CAMP).

Authors:  Kodai Hara; Shota Taharazako; Masanori Ikeda; Hiroki Fujita; Yoshiko Mikami; Sotaro Kikuchi; Asami Hishiki; Hideshi Yokoyama; Yoshinobu Ishikawa; Shin-Ichiro Kanno; Kozo Tanaka; Hiroshi Hashimoto
Journal:  J Biol Chem       Date:  2017-09-08       Impact factor: 5.157

9.  Structural basis for shieldin complex subunit 3-mediated recruitment of the checkpoint protein REV7 during DNA double-strand break repair.

Authors:  Yaxin Dai; Fan Zhang; Longge Wang; Shan Shan; Zihua Gong; Zheng Zhou
Journal:  J Biol Chem       Date:  2019-12-03       Impact factor: 5.157

10.  Structure-Based Drug Design of Phenazopyridine Derivatives as Inhibitors of Rev1 Interactions in Translesion Synthesis.

Authors:  Kerry Silva McPherson; Angela M Zaino; Radha C Dash; Alessandro A Rizzo; Yunfeng Li; Bing Hao; Irina Bezsonova; M Kyle Hadden; Dmitry M Korzhnev
Journal:  ChemMedChem       Date:  2021-01-28       Impact factor: 3.466

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