Literature DB >> 24449906

Human Pol ζ purified with accessory subunits is active in translesion DNA synthesis and complements Pol η in cisplatin bypass.

Young-Sam Lee1, Mark T Gregory, Wei Yang.   

Abstract

DNA polymerase ζ (Pol ζ) is a eukaryotic B-family DNA polymerase that specializes in translesion synthesis and is essential for normal embryogenesis. At a minimum, Pol ζ consists of a catalytic subunit Rev3 and an accessory subunit Rev7. Mammalian Rev3 contains >3,000 residues and is twice as large as the yeast homolog. To date, no vertebrate Pol ζ has been purified for biochemical characterization. Here we report purification of a series of human Rev3 deletion constructs expressed in HEK293 cells and identification of a minimally catalytically active human Pol ζ variant. With a tagged form of an active Pol ζ variant, we isolated two additional accessory subunits of human Pol ζ, PolD2 and PolD3. The purified four-subunit Pol ζ4 (Rev3-Rev7-PolD2-PolD3) is much more efficient and more processive at bypassing a 1,2-intrastrand d(GpG)-cisplatin cross-link than the two-subunit Pol ζ2 (Rev3-Rev7). We show that complete bypass of cisplatin lesions requires Pol η to insert dCTP opposite the 3' guanine and Pol ζ4 to extend the primers.

Entities:  

Keywords:  MAD2L2; REV3L; TLS; processivity; two-polymerase lesion bypass

Mesh:

Substances:

Year:  2014        PMID: 24449906      PMCID: PMC3939873          DOI: 10.1073/pnas.1324001111

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  47 in total

1.  Structure of DNA polymerase delta from Saccharomyces cerevisiae.

Authors:  E Johansson; J Majka; P M Burgers
Journal:  J Biol Chem       Date:  2001-09-21       Impact factor: 5.157

Review 2.  Cellular functions of DNA polymerase zeta and Rev1 protein.

Authors:  Christopher W Lawrence
Journal:  Adv Protein Chem       Date:  2004

3.  Pol32 is required for Pol zeta-dependent translesion synthesis and prevents double-strand breaks at the replication fork.

Authors:  Michelle Hanna; Lindsay G Ball; Amy H Tong; Charles Boone; Wei Xiao
Journal:  Mutat Res       Date:  2007-06-28       Impact factor: 2.433

4.  Structural basis of Rev1-mediated assembly of a quaternary vertebrate translesion polymerase complex consisting of Rev1, heterodimeric polymerase (Pol) ζ, and Pol κ.

Authors:  Jessica Wojtaszek; Chul-Jin Lee; Sanjay D'Souza; Brenda Minesinger; Hyungjin Kim; Alan D D'Andrea; Graham C Walker; Pei Zhou
Journal:  J Biol Chem       Date:  2012-08-02       Impact factor: 5.157

5.  Disruption of the Rev3l-encoded catalytic subunit of polymerase zeta in mice results in early embryonic lethality.

Authors:  G Esposito; I Godindagger; U Klein; M L Yaspo; A Cumano; K Rajewsky
Journal:  Curr Biol       Date:  2000-10-05       Impact factor: 10.834

6.  Complex formation with Rev1 enhances the proficiency of Saccharomyces cerevisiae DNA polymerase zeta for mismatch extension and for extension opposite from DNA lesions.

Authors:  Narottam Acharya; Robert E Johnson; Satya Prakash; Louise Prakash
Journal:  Mol Cell Biol       Date:  2006-10-09       Impact factor: 4.272

7.  The relative roles in vivo of Saccharomyces cerevisiae Pol eta, Pol zeta, Rev1 protein and Pol32 in the bypass and mutation induction of an abasic site, T-T (6-4) photoadduct and T-T cis-syn cyclobutane dimer.

Authors:  Peter E M Gibbs; John McDonald; Roger Woodgate; Christopher W Lawrence
Journal:  Genetics       Date:  2004-11-01       Impact factor: 4.562

Review 8.  Multiple two-polymerase mechanisms in mammalian translesion DNA synthesis.

Authors:  Zvi Livneh; Omer Ziv; Sigal Shachar
Journal:  Cell Cycle       Date:  2010-02-23       Impact factor: 4.534

9.  REV7, a new gene concerned with UV mutagenesis in yeast.

Authors:  C W Lawrence; G Das; R B Christensen
Journal:  Mol Gen Genet       Date:  1985

10.  X-ray structure of the complex of regulatory subunits of human DNA polymerase delta.

Authors:  Andrey G Baranovskiy; Nigar D Babayeva; Victoria G Liston; Igor B Rogozin; Eugene V Koonin; Youri I Pavlov; Dmitry G Vassylyev; Tahir H Tahirov
Journal:  Cell Cycle       Date:  2008-10-04       Impact factor: 4.534

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  88 in total

Review 1.  Recent insights into the molecular basis of Fanconi anemia: genes, modifiers, and drivers.

Authors:  Ronald S Cheung; Toshiyasu Taniguchi
Journal:  Int J Hematol       Date:  2017-06-19       Impact factor: 2.490

2.  Virtual Pharmacophore Screening Identifies Small-Molecule Inhibitors of the Rev1-CT/RIR Protein-Protein Interaction.

Authors:  Radha C Dash; Zuleyha Ozen; Kaitlyn R McCarthy; Nimrat Chatterjee; Cynthia A Harris; Alessandro A Rizzo; Graham C Walker; Dmitry M Korzhnev; M Kyle Hadden
Journal:  ChemMedChem       Date:  2019-08-21       Impact factor: 3.466

3.  Crystal Structure of the Human Pol α B Subunit in Complex with the C-terminal Domain of the Catalytic Subunit.

Authors:  Yoshiaki Suwa; Jianyou Gu; Andrey G Baranovskiy; Nigar D Babayeva; Youri I Pavlov; Tahir H Tahirov
Journal:  J Biol Chem       Date:  2015-04-06       Impact factor: 5.157

4.  Repair and translesion synthesis of O 6-alkylguanine DNA lesions in human cells.

Authors:  Hua Du; Pengcheng Wang; Lin Li; Yinsheng Wang
Journal:  J Biol Chem       Date:  2019-06-05       Impact factor: 5.157

Review 5.  Translesion DNA polymerases in eukaryotes: what makes them tick?

Authors:  Alexandra Vaisman; Roger Woodgate
Journal:  Crit Rev Biochem Mol Biol       Date:  2017-03-09       Impact factor: 8.250

6.  Divalent Cations Alter the Rate-Limiting Step of PrimPol-Catalyzed DNA Elongation.

Authors:  Wenyan Xu; Wenxin Zhao; Nana Morehouse; Maya O Tree; Linlin Zhao
Journal:  J Mol Biol       Date:  2019-01-08       Impact factor: 5.469

7.  Rev7 dimerization is important for assembly and function of the Rev1/Polζ translesion synthesis complex.

Authors:  Alessandro A Rizzo; Faye-Marie Vassel; Nimrat Chatterjee; Sanjay D'Souza; Yunfeng Li; Bing Hao; Michael T Hemann; Graham C Walker; Dmitry M Korzhnev
Journal:  Proc Natl Acad Sci U S A       Date:  2018-08-15       Impact factor: 11.205

8.  Tripartite DNA Lesion Recognition and Verification by XPC, TFIIH, and XPA in Nucleotide Excision Repair.

Authors:  Chia-Lung Li; Filip M Golebiowski; Yuki Onishi; Nadine L Samara; Kaoru Sugasawa; Wei Yang
Journal:  Mol Cell       Date:  2015-09-17       Impact factor: 17.970

9.  A novel variant of DNA polymerase ζ, Rev3ΔC, highlights differential regulation of Pol32 as a subunit of polymerase δ versus ζ in Saccharomyces cerevisiae.

Authors:  Hollie M Siebler; Artem G Lada; Andrey G Baranovskiy; Tahir H Tahirov; Youri I Pavlov
Journal:  DNA Repair (Amst)       Date:  2014-05-10

10.  The roles of polymerases ν and θ in replicative bypass of O 6- and N 2-alkyl-2'-deoxyguanosine lesions in human cells.

Authors:  Hua Du; Pengcheng Wang; Jun Wu; Xiaomei He; Yinsheng Wang
Journal:  J Biol Chem       Date:  2020-02-25       Impact factor: 5.157

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