Literature DB >> 31484720

REV7 has a dynamic adaptor region to accommodate small GTPase RAN/Shigella IpaB ligands, and its activity is regulated by the RanGTP/GDP switch.

Xin Wang1, Nomi Pernicone2, Limor Pertz2, Deping Hua1, Tianqing Zhang1, Tamar Listovsky3, Wei Xie4.   

Abstract

REV7, also termed mitotic arrest-deficient 2-like 2 (MAD2L2 or MAD2B), acts as an interaction module in a broad array of cellular pathways, including translesion DNA synthesis, cell cycle control, and nonhomologous end joining. Numerous REV7 binding partners have been identified, including the human small GTPase Ras-associated nuclear protein (RAN), which acts as a potential upstream regulator of REV7. Notably, the Shigella invasin IpaB hijacks REV7 to disrupt cell cycle control to prevent intestinal epithelial cell renewal and facilitate bacterial colonization. However, the structural details of the REV7-RAN and REV7-IpaB interactions are mostly unknown. Here, using fusion protein and rigid maltose-binding protein tagging strategies, we determined the crystal structures of these two complexes at 2.00-2.35 Å resolutions. The structures revealed that both RAN and IpaB fragments bind the "safety belt" region of REV7, inducing rearrangement of the C-terminal β-sheet region of REV7, conserved among REV7-related complexes. Of note, the REV7-binding motifs of RAN and IpaB each displayed some unique interactions with REV7 despite sharing consensus residues. Structural alignments revealed that REV7 has an adaptor region within the safety belt region that can rearrange secondary structures to fit a variety of different ligands. Our structural and biochemical results further indicated that REV7 preferentially binds GTP-bound RAN, implying that a GTP/GDP-bound transition of RAN may serve as the molecular switch that controls REV7's activity. These results provide insights into the regulatory mechanism of REV7 in cell cycle control, which may help with the development of small-molecule inhibitors that target REV7 activity.
© 2019 Wang et al.

Entities:  

Keywords:  IpaB; RAN; REV7; Shigella invasin; cell cycle; crystal structure; host–pathogen interaction; mitotic arrest–deficient 2-like 2 (MAD2L2); protein complex; small GTPase; structural biology

Mesh:

Substances:

Year:  2019        PMID: 31484720      PMCID: PMC6816109          DOI: 10.1074/jbc.RA119.010123

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  52 in total

1.  PCNA ubiquitination and REV1 define temporally distinct mechanisms for controlling translesion synthesis in the avian cell line DT40.

Authors:  Charlotte E Edmunds; Laura J Simpson; Julian E Sale
Journal:  Mol Cell       Date:  2008-05-23       Impact factor: 17.970

2.  A Small Molecule Targeting Mutagenic Translesion Synthesis Improves Chemotherapy.

Authors:  Jessica L Wojtaszek; Nimrat Chatterjee; Javaria Najeeb; Azucena Ramos; Minhee Lee; Ke Bian; Jenny Y Xue; Benjamin A Fenton; Hyeri Park; Deyu Li; Michael T Hemann; Jiyong Hong; Graham C Walker; Pei Zhou
Journal:  Cell       Date:  2019-06-06       Impact factor: 41.582

3.  Rev7 dimerization is important for assembly and function of the Rev1/Polζ translesion synthesis complex.

Authors:  Alessandro A Rizzo; Faye-Marie Vassel; Nimrat Chatterjee; Sanjay D'Souza; Yunfeng Li; Bing Hao; Michael T Hemann; Graham C Walker; Dmitry M Korzhnev
Journal:  Proc Natl Acad Sci U S A       Date:  2018-08-15       Impact factor: 11.205

4.  Structural basis of recruitment of DNA polymerase ζ by interaction between REV1 and REV7 proteins.

Authors:  Sotaro Kikuchi; Kodai Hara; Toshiyuki Shimizu; Mamoru Sato; Hiroshi Hashimoto
Journal:  J Biol Chem       Date:  2012-08-02       Impact factor: 5.157

5.  Structural insights into the assembly of human translesion polymerase complexes.

Authors:  Wei Xie; Xuan Yang; Min Xu; Tao Jiang
Journal:  Protein Cell       Date:  2012-11-10       Impact factor: 14.870

6.  A bacterial invasin induces macrophage apoptosis by binding directly to ICE.

Authors:  Y Chen; M R Smith; K Thirumalai; A Zychlinsky
Journal:  EMBO J       Date:  1996-08-01       Impact factor: 11.598

7.  Unconventional ubiquitin recognition by the ubiquitin-binding motif within the Y family DNA polymerases iota and Rev1.

Authors:  Martha G Bomar; Sanjay D'Souza; Marzena Bienko; Ivan Dikic; Graham C Walker; Pei Zhou
Journal:  Mol Cell       Date:  2010-02-12       Impact factor: 17.970

8.  Crystallographic and biochemical analysis of the Ran-binding zinc finger domain.

Authors:  James R Partridge; Thomas U Schwartz
Journal:  J Mol Biol       Date:  2009-06-06       Impact factor: 5.469

9.  Initial steps of Shigella infection depend on the cholesterol/sphingolipid raft-mediated CD44-IpaB interaction.

Authors:  Frank Lafont; Guy Tran Van Nhieu; Kentaro Hanada; Philippe Sansonetti; F Gisou van der Goot
Journal:  EMBO J       Date:  2002-09-02       Impact factor: 11.598

10.  REV7 counteracts DNA double-strand break resection and affects PARP inhibition.

Authors:  J Ross Chapman; Inger Brandsma; Guotai Xu; Jingsong Yuan; Martin Mistrik; Peter Bouwman; Jirina Bartkova; Ewa Gogola; Daniël Warmerdam; Marco Barazas; Janneke E Jaspers; Kenji Watanabe; Mark Pieterse; Ariena Kersbergen; Wendy Sol; Patrick H N Celie; Philip C Schouten; Bram van den Broek; Ahmed Salman; Marja Nieuwland; Iris de Rink; Jorma de Ronde; Kees Jalink; Simon J Boulton; Junjie Chen; Dik C van Gent; Jiri Bartek; Jos Jonkers; Piet Borst; Sven Rottenberg
Journal:  Nature       Date:  2015-03-23       Impact factor: 49.962

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  6 in total

Review 1.  Functions and Regulation of Meiotic HORMA-Domain Proteins.

Authors:  Josh P Prince; Enrique Martinez-Perez
Journal:  Genes (Basel)       Date:  2022-04-27       Impact factor: 4.141

2.  Structural basis for shieldin complex subunit 3-mediated recruitment of the checkpoint protein REV7 during DNA double-strand break repair.

Authors:  Yaxin Dai; Fan Zhang; Longge Wang; Shan Shan; Zihua Gong; Zheng Zhou
Journal:  J Biol Chem       Date:  2019-12-03       Impact factor: 5.157

Review 3.  REV7: Jack of many trades.

Authors:  Inge de Krijger; Vera Boersma; Jacqueline J L Jacobs
Journal:  Trends Cell Biol       Date:  2021-05-04       Impact factor: 20.808

4.  Molecular mechanisms of assembly and TRIP13-mediated remodeling of the human Shieldin complex.

Authors:  Wei Xie; Shengliu Wang; Juncheng Wang; M Jason de la Cruz; Guotai Xu; Maurizio Scaltriti; Dinshaw J Patel
Journal:  Proc Natl Acad Sci U S A       Date:  2021-02-23       Impact factor: 11.205

5.  Disrupting the MAD2L2-Rev1 Complex Enhances Cell Death upon DNA Damage.

Authors:  Nomi Pernicone; Maria Elias; Itay Onn; Dror Tobi; Tamar Listovsky
Journal:  Molecules       Date:  2022-01-19       Impact factor: 4.411

6.  MAD2B promotes podocyte injury through regulating Numb-dependent Notch 1 pathway in diabetic nephropathy.

Authors:  Meng-Ran Li; Chun-Tao Lei; Hui Tang; Xing-Jie Yin; Zhe Hao; Yang Qiu; Ya-Ru Xie; Jie-Yu Zeng; Hua Su; Chun Zhang
Journal:  Int J Biol Sci       Date:  2022-02-21       Impact factor: 6.580

  6 in total

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