Literature DB >> 23105065

Draft genome sequence of the xylan-degrading marine bacterium strain S124, representing a novel species of the genus Oceanicola.

Young-Kyung Kwon1, Jennifer Jooyoun Kim, Ji Hyung Kim, Seon-Mi Jeon, Bo-Ram Ye, Jiyi Jang, Soo-Jin Heo, Se Chang Park, Do-Hyung Kang, Chulhong Oh.   

Abstract

We isolated a xylan-degrading bacterium from seawater of Micronesia and identified it as Oceanicola sp. strain S124. We sequenced the Oceanicola sp. S124 genome using GSFLX 454 pyrosequencing and predicted 4,433 open reading frames (ORFs) including putative saccharification and phage-related genes.

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Year:  2012        PMID： 23105065      PMCID： PMC3486357          DOI： 10.1128/JB.01614-12

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  7 in total

1.  Oceanicola granulosus gen. nov., sp. nov. and Oceanicola batsensis sp. nov., poly-beta-hydroxybutyrate-producing marine bacteria in the order 'Rhodobacterales'.

Authors:  Jang-Cheon Cho; Stephen J Giovannoni
Journal:  Int J Syst Evol Microbiol       Date:  2004-07       Impact factor: 2.747

2.  Oceanicola nanhaiensis sp. nov., isolated from sediments of the South China Sea.

Authors:  Jun Gu; Bin Guo; Ya-Nan Wang; Su-Lin Yu; Ryuhei Inamori; Ri Qu; Yu-Guang Ye; Xiao-Lei Wu
Journal:  Int J Syst Evol Microbiol       Date:  2007-01       Impact factor: 2.747

Review 3.  Ethanol fermentation from biomass resources: current state and prospects.

Authors:  Yan Lin; Shuzo Tanaka
Journal:  Appl Microbiol Biotechnol       Date:  2005-12-06       Impact factor: 4.813

4.  Genome sequences of Oceanicola granulosus HTCC2516(T) and Oceanicola batsensis HTCC2597(TDelta).

Authors:  J Cameron Thrash; Jang-Cheon Cho; Kevin L Vergin; Stephen J Giovannoni
Journal:  J Bacteriol       Date:  2010-04-23       Impact factor: 3.490

5.  Oceanicola nitratireducens sp. nov., a marine alphaproteobacterium isolated from the South China Sea.

Authors:  Qiang Zheng; Chuang Chen; Ya-Nan Wang; Nianzhi Jiao
Journal:  Int J Syst Evol Microbiol       Date:  2009-08-28       Impact factor: 2.747

6.  Oceanicola pacificus sp. nov., isolated from a deep-sea pyrene-degrading consortium.

Authors:  Jun Yuan; Qiliang Lai; Baojiang Wang; Fengqin Sun; Xiupian Liu; Yaping Du; Guangyu Li; Li Gu; Tianling Zheng; Zongze Shao
Journal:  Int J Syst Evol Microbiol       Date:  2009-05       Impact factor: 2.747

7.  Oceanicola marinus sp. nov., a marine alphaproteobacterium isolated from seawater collected off Taiwan.

Authors:  Kuan-Yin Lin; Shih-Yi Sheu; Poh-Shing Chang; Jang-Cheon Cho; Wen-Ming Chen
Journal:  Int J Syst Evol Microbiol       Date:  2007-07       Impact factor: 2.747
  7 in total
  1 in total

1.  Genome-Resolved Metagenomic Analysis Reveals Roles for Candidate Phyla and Other Microbial Community Members in Biogeochemical Transformations in Oil Reservoirs.

Authors:  Ping Hu; Lauren Tom; Andrea Singh; Brian C Thomas; Brett J Baker; Yvette M Piceno; Gary L Andersen; Jillian F Banfield
Journal:  MBio       Date:  2016-01-19       Impact factor: 7.867
  1 in total

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