Literature DB >> 17220459

Oceanicola nanhaiensis sp. nov., isolated from sediments of the South China Sea.

Jun Gu1, Bin Guo1, Ya-Nan Wang1, Su-Lin Yu1, Ryuhei Inamori2, Ri Qu1, Yu-Guang Ye3, Xiao-Lei Wu1.   

Abstract

A Gram-negative, non-motile, rod-shaped bacterium, strain SS011B1-20(T), was isolated from sediments of the South China Sea. Growth occurred at NaCl concentrations between 0 and 10 % and at temperatures between 10 and 37 degrees C. Strain SS011B1-20(T) contained Q-10 as the major respiratory quinone and C(18 : 1)omega7c (81.2 %), C(16 : 0) (7.0 %) and C(18 : 1) methyl (4.3 %) as the predominant fatty acids. The G+C content of the genomic DNA was 64.7 mol%. A phylogenetic analysis based on the 16S rRNA gene sequence indicated that strain SS011B1-20(T) belonged to a clade within the genus Oceanicola in the Alphaproteobacteria, the highest sequence similarities being found with respect to Oceanicola batsensis (96.3 %) and with Oceanicola granulosus (94.9 %). Strain SS011B1-20(T) could be clearly distinguished from other Oceanicola species on the basis of the genotypic, phenotypic and phylogenetic data. Thus, it is proposed that strain SS011B1-20(T) represents a novel species of the genus Oceanicola, with the name Oceanicola nanhaiensis sp. nov. The type strain is SS011B1-20(T) (=LMG 23508(T)=CGMCC 1.6293(T)).

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Year:  2007        PMID: 17220459     DOI: 10.1099/ijs.0.64532-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  5 in total

1.  Seohaeicola nanhaiensis sp. nov., a moderately halophilic bacterium isolated from the benthic sediment of South China Sea.

Authors:  Bai-Sheng Xie; Xiang-Lin Lv; Man Cai; Yue-Qin Tang; Yan-Nan Wang; Heng-Lin Cui; Xue-Ying Liu; Yan Tan; Xiao-Lei Wu
Journal:  Curr Microbiol       Date:  2014-07-16       Impact factor: 2.188

2.  Genome sequence of Phaeobacter caeruleus type strain (DSM 24564(T)), a surface-associated member of the marine Roseobacter clade.

Authors:  Paul G Beyersmann; Olga Chertkov; Jörn Petersen; Anne Fiebig; Amy Chen; Amrita Pati; Natalia Ivanova; Alla Lapidus; Lynne A Goodwin; Patrick Chain; John C Detter; Manfred Rohde; Sabine Gronow; Nikos C Kyrpides; Tanja Woyke; Meinhard Simon; Markus Göker; Hans-Peter Klenk; Thorsten Brinkhoff
Journal:  Stand Genomic Sci       Date:  2013-07-30

3.  Draft genome sequence of the xylan-degrading marine bacterium strain S124, representing a novel species of the genus Oceanicola.

Authors:  Young-Kyung Kwon; Jennifer Jooyoun Kim; Ji Hyung Kim; Seon-Mi Jeon; Bo-Ram Ye; Jiyi Jang; Soo-Jin Heo; Se Chang Park; Do-Hyung Kang; Chulhong Oh
Journal:  J Bacteriol       Date:  2012-11       Impact factor: 3.490

4.  Genome sequence of Phaeobacter daeponensis type strain (DSM 23529(T)), a facultatively anaerobic bacterium isolated from marine sediment, and emendation of Phaeobacter daeponensis.

Authors:  Marco Dogs; Hazuki Teshima; Jörn Petersen; Anne Fiebig; Olga Chertkov; Hajnalka Dalingault; Amy Chen; Amrita Pati; Lynne A Goodwin; Patrick Chain; John C Detter; Natalia Ivanova; Alla Lapidus; Manfred Rohde; Sabine Gronow; Nikos C Kyrpides; Tanja Woyke; Meinhard Simon; Markus Göker; Hans-Peter Klenk; Thorsten Brinkhoff
Journal:  Stand Genomic Sci       Date:  2013-10-03

5.  Genome sequence and emended description of Leisingera nanhaiensis strain DSM 24252(T) isolated from marine sediment.

Authors:  Sven Breider; Hazuki Teshima; Jörn Petersen; Olga Chertkov; Hajnalka Dalingault; Amy Chen; Amrita Pati; Natalia Ivanova; Alla Lapidus; Lynne A Goodwin; Patrick Chain; John C Detter; Manfred Rohde; Brian J Tindall; Nikos C Kyrpides; Tanja Woyke; Meinhard Simon; Markus Göker; Hans-Peter Klenk; Thorsten Brinkhoff
Journal:  Stand Genomic Sci       Date:  2014-01-25
  5 in total

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