Literature DB >> 23070589

Comparing paired biomarkers in predicting quantitative health outcome subject to random censoring.

Xinhua Liu1, Zhezhen Jin2, Joseph H Graziano3.   

Abstract

This paper uses a non-parametric test, based on consistently estimated discrimination accuracy defined as concordance probability between quantitative predictor and outcome, to compare paired biomarkers in predicting a health outcome, possibly subject to random censoring. Comparing with the Wilcoxon test for paired predictors based on Harrell's C-index, we found that the proposed test is better in presence of random censoring, although the two unbiased tests are equivalent for outcome either uncensored or censored by a constant. A simulation study also demonstrates that the bias in estimated difference in concordance probability, due to ignoring random censoring, results in overestimated power, especially when random censoring is heavy. The method was applied in two studies, where the biomarkers measured from the same study subjects are correlated. The first study on 299 school children in Bangladesh found the associations that higher blood arsenic and manganese were related to lower intellectual test scores, while the differences between the biomarkers in predicting the intellectual test scores were not statistically significant. The second study on 418 patients with primary biliary cirrhosis found that the baseline serum bilirubin had greater discrimination accuracy than the baseline serum albumin in predicting survival time.
© The Author(s) 2012.

Entities:  

Keywords:  C-index; concordance probability; discrimination accuracy; paired predictors; random censoring

Mesh:

Substances:

Year:  2012        PMID: 23070589      PMCID: PMC4390496          DOI: 10.1177/0962280212460434

Source DB:  PubMed          Journal:  Stat Methods Med Res        ISSN: 0962-2802            Impact factor:   3.021


  7 in total

1.  Overall C as a measure of discrimination in survival analysis: model specific population value and confidence interval estimation.

Authors:  Michael J Pencina; Ralph B D'Agostino
Journal:  Stat Med       Date:  2004-07-15       Impact factor: 2.373

2.  The concordance index C and the Mann-Whitney parameter Pr(X>Y) with randomly censored data.

Authors:  James A Koziol; Zhenyu Jia
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Review 3.  Multivariable prognostic models: issues in developing models, evaluating assumptions and adequacy, and measuring and reducing errors.

Authors:  F E Harrell; K L Lee; D B Mark
Journal:  Stat Med       Date:  1996-02-28       Impact factor: 2.373

4.  Arsenic and manganese exposure and children's intellectual function.

Authors:  Gail A Wasserman; Xinhua Liu; Faruque Parvez; Pam Factor-Litvak; Habibul Ahsan; Diane Levy; Jennie Kline; Alexander van Geen; Jacob Mey; Vesna Slavkovich; Abu B Siddique; Tariqul Islam; Joseph H Graziano
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5.  Health Effects of Arsenic Longitudinal Study (HEALS): description of a multidisciplinary epidemiologic investigation.

Authors:  Habibul Ahsan; Yu Chen; Faruque Parvez; Maria Argos; Azm Iftikhar Hussain; Hassina Momotaj; Diane Levy; Alexander van Geen; Geoffrey Howe; Joseph Graziano
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6.  Regression modelling strategies for improved prognostic prediction.

Authors:  F E Harrell; K L Lee; R M Califf; D B Pryor; R A Rosati
Journal:  Stat Med       Date:  1984 Apr-Jun       Impact factor: 2.373

7.  Excellent long-term survival in patients with primary biliary cirrhosis and biochemical response to ursodeoxycholic Acid.

Authors:  Albert Parés; Llorenç Caballería; Juan Rodés
Journal:  Gastroenterology       Date:  2006-03       Impact factor: 22.682

  7 in total
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