Literature DB >> 23063653

Dicer partner proteins tune the length of mature miRNAs in flies and mammals.

Ryuya Fukunaga1, Bo W Han, Jui-Hung Hung, Jia Xu, Zhiping Weng, Phillip D Zamore.   

Abstract

Drosophila Dicer-1 produces microRNAs (miRNAs) from pre-miRNA, whereas Dicer-2 generates small interfering RNAs (siRNAs) from long dsRNA. Alternative splicing of the loquacious (loqs) mRNA generates three distinct Dicer partner proteins. To understand the function of each, we constructed flies expressing Loqs-PA, Loqs-PB, or Loqs-PD. Loqs-PD promotes both endo- and exo-siRNA production by Dicer-2. Loqs-PA or Loqs-PB is required for viability, but the proteins are not fully redundant: a specific subset of miRNAs requires Loqs-PB. Surprisingly, Loqs-PB tunes where Dicer-1 cleaves pre-miR-307a, generating a longer miRNA isoform with a distinct seed sequence and target specificity. The longer form of miR-307a represses glycerol kinase and taranis mRNA expression. The mammalian Dicer-partner TRBP, a Loqs-PB homolog, similarly tunes where Dicer cleaves pre-miR-132. Thus, Dicer-binding partner proteins change the choice of cleavage site by Dicer, producing miRNAs with target specificities different from those made by Dicer alone or Dicer bound to alternative protein partners.
Copyright © 2012 Elsevier Inc. All rights reserved.

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Year:  2012        PMID: 23063653      PMCID: PMC3609031          DOI: 10.1016/j.cell.2012.09.027

Source DB:  PubMed          Journal:  Cell        ISSN: 0092-8674            Impact factor:   41.582


  63 in total

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Journal:  Plant Mol Biol       Date:  2005-01       Impact factor: 4.076

5.  Dicer-1 and R3D1-L catalyze microRNA maturation in Drosophila.

Authors:  Feng Jiang; Xuecheng Ye; Xiang Liu; Lauren Fincher; Dennis McKearin; Qinghua Liu
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6.  The Drosha-DGCR8 complex in primary microRNA processing.

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9.  Normal microRNA maturation and germ-line stem cell maintenance requires Loquacious, a double-stranded RNA-binding domain protein.

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10.  Processing of pre-microRNAs by the Dicer-1-Loquacious complex in Drosophila cells.

Authors:  Kuniaki Saito; Akira Ishizuka; Haruhiko Siomi; Mikiko C Siomi
Journal:  PLoS Biol       Date:  2005-05-24       Impact factor: 8.029

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  90 in total

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Review 6.  Dgcr8 knockout approaches to understand microRNA functions in vitro and in vivo.

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Review 8.  Review: placenta-specific microRNAs in exosomes - good things come in nano-packages.

Authors:  Y Ouyang; J-F Mouillet; C B Coyne; Y Sadovsky
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9.  Loquacious-PD removes phosphate inhibition of Dicer-2 processing of hairpin RNAs into siRNAs.

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Journal:  Biochem Biophys Res Commun       Date:  2018-03-16       Impact factor: 3.575

10.  Characterization of a naturally occurring truncated Dicer.

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