Literature DB >> 30673536

Double-Stranded RNA Sensors and Modulators in Innate Immunity.

Sun Hur1,2.   

Abstract

Detection of double-stranded RNAs (dsRNAs) is a central mechanism of innate immune defense in many organisms. We here discuss several families of dsRNA-binding proteins involved in mammalian antiviral innate immunity. These include RIG-I-like receptors, protein kinase R, oligoadenylate synthases, adenosine deaminases acting on RNA, RNA interference systems, and other proteins containing dsRNA-binding domains and helicase domains. Studies suggest that their functions are highly interdependent and that their interdependence could offer keys to understanding the complex regulatory mechanisms for cellular dsRNA homeostasis and antiviral immunity. This review aims to highlight their interconnectivity, as well as their commonalities and differences in their dsRNA recognition mechanisms.

Entities:  

Keywords:  RIG-I-like receptor; RNA interference; dsRNA; dsRNA-dependent adenosine deaminase; oligoadenylate synthase; protein kinase R

Mesh:

Substances:

Year:  2019        PMID: 30673536      PMCID: PMC7136661          DOI: 10.1146/annurev-immunol-042718-041356

Source DB:  PubMed          Journal:  Annu Rev Immunol        ISSN: 0732-0582            Impact factor:   28.527


  214 in total

1.  ATPase-driven oligomerization of RIG-I on RNA allows optimal activation of type-I interferon.

Authors:  Jenish R Patel; Ankur Jain; Yi-ying Chou; Alina Baum; Taekjip Ha; Adolfo García-Sastre
Journal:  EMBO Rep       Date:  2013-07-12       Impact factor: 8.807

2.  Interactions between the double-stranded RNA-binding proteins TRBP and PACT define the Medipal domain that mediates protein-protein interactions.

Authors:  Ghislaine Laraki; Guerline Clerzius; Aïcha Daher; Carlos Melendez-Peña; Sylvanne Daniels; Anne Gatignol
Journal:  RNA Biol       Date:  2008-04-08       Impact factor: 4.652

3.  Stress-induced phosphorylation of PACT reduces its interaction with TRBP and leads to PKR activation.

Authors:  Madhurima Singh; David Castillo; Chandrashekhar V Patel; Rekha C Patel
Journal:  Biochemistry       Date:  2011-05-06       Impact factor: 3.162

Review 4.  An RNA editor, adenosine deaminase acting on double-stranded RNA (ADAR1).

Authors:  Cyril X George; Lijo John; Charles E Samuel
Journal:  J Interferon Cytokine Res       Date:  2014-06       Impact factor: 2.607

5.  A phosphate-binding pocket within the platform-PAZ-connector helix cassette of human Dicer.

Authors:  Yuan Tian; Dhirendra K Simanshu; Jin-Biao Ma; Jong-Eun Park; Inha Heo; V Narry Kim; Dinshaw J Patel
Journal:  Mol Cell       Date:  2014-01-30       Impact factor: 17.970

6.  p59OASL, a 2'-5' oligoadenylate synthetase like protein: a novel human gene related to the 2'-5' oligoadenylate synthetase family.

Authors:  R Hartmann; H S Olsen; S Widder; R Jorgensen; J Justesen
Journal:  Nucleic Acids Res       Date:  1998-09-15       Impact factor: 16.971

7.  Human TRBP and PACT directly interact with each other and associate with dicer to facilitate the production of small interfering RNA.

Authors:  Kin Hang Kok; Ming-Him James Ng; Yick-Pang Ching; Dong-Yan Jin
Journal:  J Biol Chem       Date:  2007-04-23       Impact factor: 5.157

8.  A diverse range of gene products are effectors of the type I interferon antiviral response.

Authors:  John W Schoggins; Sam J Wilson; Maryline Panis; Mary Y Murphy; Christopher T Jones; Paul Bieniasz; Charles M Rice
Journal:  Nature       Date:  2011-04-10       Impact factor: 49.962

9.  hiCLIP reveals the in vivo atlas of mRNA secondary structures recognized by Staufen 1.

Authors:  Yoichiro Sugimoto; Alessandra Vigilante; Elodie Darbo; Alexandra Zirra; Cristina Militti; Andrea D'Ambrogio; Nicholas M Luscombe; Jernej Ule
Journal:  Nature       Date:  2015-03-18       Impact factor: 49.962

10.  Cancer therapies activate RIG-I-like receptor pathway through endogenous non-coding RNAs.

Authors:  Diana Rose E Ranoa; Akash D Parekh; Sean P Pitroda; Xiaona Huang; Thomas Darga; Anthony C Wong; Lei Huang; Jorge Andrade; Jonathan P Staley; Takashi Satoh; Shizuo Akira; Ralph R Weichselbaum; Nikolai N Khodarev
Journal:  Oncotarget       Date:  2016-05-03
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  93 in total

1.  Structural analysis of RIG-I-like receptors reveals ancient rules of engagement between diverse RNA helicases and TRIM ubiquitin ligases.

Authors:  Kazuki Kato; Sadeem Ahmad; Zixiang Zhu; Janet M Young; Xin Mu; Sehoon Park; Harmit S Malik; Sun Hur
Journal:  Mol Cell       Date:  2020-12-28       Impact factor: 17.970

Review 2.  Cellular RNA surveillance in health and disease.

Authors:  Sandra L Wolin; Lynne E Maquat
Journal:  Science       Date:  2019-11-14       Impact factor: 47.728

Review 3.  RNA regulation of the antiviral protein 2'-5'-oligoadenylate synthetase.

Authors:  Samantha L Schwartz; Graeme L Conn
Journal:  Wiley Interdiscip Rev RNA       Date:  2019-04-15       Impact factor: 9.957

4.  Noncanonical immune response to the inhibition of DNA methylation by Staufen1 via stabilization of endogenous retrovirus RNAs.

Authors:  Yongsuk Ku; Joo-Hwan Park; Ryeongeun Cho; Yongki Lee; Hyoung-Min Park; MinA Kim; Kyunghoon Hur; Soo Young Byun; Jun Liu; Young-Suk Lee; David Shum; Dong-Yeop Shin; Youngil Koh; Je-Yoel Cho; Sung-Soo Yoon; Junshik Hong; Yoosik Kim
Journal:  Proc Natl Acad Sci U S A       Date:  2021-03-30       Impact factor: 11.205

5.  The multi-functional reovirus σ3 protein is a virulence factor that suppresses stress granule formation and is associated with myocardial injury.

Authors:  Yingying Guo; Meleana M Hinchman; Mercedes Lewandrowski; Shaun T Cross; Danica M Sutherland; Olivia L Welsh; Terence S Dermody; John S L Parker
Journal:  PLoS Pathog       Date:  2021-07-08       Impact factor: 6.823

Review 6.  Filament-like Assemblies of Intracellular Nucleic Acid Sensors: Commonalities and Differences.

Authors:  Cristhian Cadena; Sun Hur
Journal:  Mol Cell       Date:  2019-10-17       Impact factor: 17.970

7.  Double-Stranded-RNA-Binding Protein 2 Participates in Antiviral Defense.

Authors:  Károly Fátyol; Katalin Anna Fekete; Márta Ludman
Journal:  J Virol       Date:  2020-05-18       Impact factor: 5.103

Review 8.  Regulation of cGAS- and RLR-mediated immunity to nucleic acids.

Authors:  Andrea Ablasser; Sun Hur
Journal:  Nat Immunol       Date:  2019-12-09       Impact factor: 25.606

9.  Silencing of LINE-1 retrotransposons is a selective dependency of myeloid leukemia.

Authors:  Zhimin Gu; Yuxuan Liu; Yuannyu Zhang; Hui Cao; Junhua Lyu; Xun Wang; Annika Wylie; Simon J Newkirk; Amanda E Jones; Michael Lee; Giovanni A Botten; Mi Deng; Kathryn E Dickerson; Cheng Cheng Zhang; Wenfeng An; John M Abrams; Jian Xu
Journal:  Nat Genet       Date:  2021-04-08       Impact factor: 38.330

10.  Targeting DDX3X Triggers Antitumor Immunity via a dsRNA-Mediated Tumor-Intrinsic Type I Interferon Response.

Authors:  Hyeongjwa Choi; Juntae Kwon; Min Soon Cho; Yifan Sun; Xiaofeng Zheng; Jing Wang; Kerrie B Bouker; John L Casey; Michael B Atkins; Jeffrey Toretsky; Cecil Han
Journal:  Cancer Res       Date:  2021-05-03       Impact factor: 12.701

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