Literature DB >> 30694346

Dgcr8 knockout approaches to understand microRNA functions in vitro and in vivo.

Wen-Ting Guo1, Yangming Wang2.   

Abstract

Biologic function of the majority of microRNAs (miRNAs) is still unknown. Uncovering the function of miRNAs is hurdled by redundancy among different miRNAs. The deletion of Dgcr8 leads to the deficiency in producing all canonical miRNAs, therefore, overcoming the redundancy issue. Dgcr8 knockout strategy has been instrumental in understanding the function of miRNAs in a variety of cells in vitro and in vivo. In this review, we will first give a brief introduction about miRNAs, miRNA biogenesis pathway and the role of Dgcr8 in miRNA biogenesis. We will then summarize studies performed with Dgcr8 knockout cell models with a focus on embryonic stem cells. After that, we will summarize results from various in vivo Dgcr8 knockout models. Given significant phenotypic differences in various tissues between Dgcr8 and Dicer knockout, we will also briefly review current progresses on understanding miRNA-independent functions of miRNA biogenesis factors. Finally, we will discuss the potential use of a new strategy to stably express miRNAs in Dgcr8 knockout cells. In future, Dgcr8 knockout approaches coupled with innovations in miRNA rescue strategy may provide further insights into miRNA functions in vitro and in vivo.

Entities:  

Keywords:  Alternative splicing; Cell cycle; Drosha; Glial progenitor cells; Glycolysis; Immune system; Neural system; Reproductive system

Mesh:

Substances:

Year:  2019        PMID: 30694346     DOI: 10.1007/s00018-019-03020-9

Source DB:  PubMed          Journal:  Cell Mol Life Sci        ISSN: 1420-682X            Impact factor:   9.261


  173 in total

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Journal:  RNA       Date:  2004-02       Impact factor: 4.942

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Journal:  Nature       Date:  2003-09-25       Impact factor: 49.962

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Authors:  Elsebet Lund; Stephan Güttinger; Angelo Calado; James E Dahlberg; Ulrike Kutay
Journal:  Science       Date:  2003-11-20       Impact factor: 47.728

9.  Short-interfering-RNA-mediated gene silencing in mammalian cells requires Dicer and eIF2C translation initiation factors.

Authors:  Noboru Doi; Shuhei Zenno; Ryu Ueda; Hiroko Ohki-Hamazaki; Kumiko Ui-Tei; Kaoru Saigo
Journal:  Curr Biol       Date:  2003-01-08       Impact factor: 10.834

10.  Dicer is essential for mouse development.

Authors:  Emily Bernstein; Sang Yong Kim; Michelle A Carmell; Elizabeth P Murchison; Heather Alcorn; Mamie Z Li; Alea A Mills; Stephen J Elledge; Kathryn V Anderson; Gregory J Hannon
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  14 in total

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Authors:  Maedeh Ghaffari; Seyed Mehdi Kalantar; Mahdie Hemati; Ali Dehghani Firoozabadi; Amir Asri; Ali Shams; Sina Jafari Ghalekohneh; Fateme Haghiralsadat
Journal:  Biotechnol Lett       Date:  2021-01-30       Impact factor: 2.461

2.  The 22q11.2 region regulates presynaptic gene-products linked to schizophrenia.

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Journal:  Nat Commun       Date:  2022-06-27       Impact factor: 17.694

3.  Tendon-Specific Dicer Deficient Mice Exhibit Hypoplastic Tendon Through the Downregulation of Tendon-Related Genes and MicroRNAs.

Authors:  Takenori Omoto; Dilimulati Yimiti; Yohei Sanada; Minoru Toriyama; Chenyang Ding; Yuta Hayashi; Yasunari Ikuta; Tomoyuki Nakasa; Masakazu Ishikawa; Masayuki Sano; Minjung Lee; Takayuki Akimoto; Chisa Shukunami; Shigeru Miyaki; Nobuo Adachi
Journal:  Front Cell Dev Biol       Date:  2022-06-14

4.  Tissue-specific and transcription-dependent mechanisms regulate primary microRNA processing efficiency of the human chromosome 19 MicroRNA cluster.

Authors:  Ábel Fóthi; Orsolya Biró; Zsuzsa Erdei; Ágota Apáti; Tamás I Orbán
Journal:  RNA Biol       Date:  2020-10-23       Impact factor: 4.652

5.  Deficient Expression of DGCR8 in Human Testis is Related to Spermatogenesis Dysfunction, Especially in Meiosis I.

Authors:  Emad Babakhanzadeh; Ali Khodadadian; Majid Nazari; Masoud Dehghan Tezerjani; Seyed Mohsen Aghaei; Sina Ghasemifar; Mehdi Hosseinnia; Mahta Mazaheri
Journal:  Int J Gen Med       Date:  2020-05-15

Review 6.  Exosomal miRNA: Small Molecules, Big Impact in Colorectal Cancer.

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Journal:  J Oncol       Date:  2019-10-13       Impact factor: 4.375

7.  miR‑187‑3p inhibitor attenuates cerebral ischemia/reperfusion injury by regulating Seipin‑mediated autophagic flux.

Authors:  Zhenkui Ren; Peng Xie; Ju Lv; Yumei Hu; Zhizhong Guan; Ling Chen; Wenfeng Yu
Journal:  Int J Mol Med       Date:  2020-06-16       Impact factor: 4.101

Review 8.  Crosstalk of MicroRNAs and Oxidative Stress in the Pathogenesis of Cancer.

Authors:  Can Lu; Danting Zhou; Qiang Wang; Wenliang Liu; Fenglei Yu; Fang Wu; Chen Chen
Journal:  Oxid Med Cell Longev       Date:  2020-04-28       Impact factor: 6.543

9.  Functional Dissection of pri-miR-290~295 in Dgcr8 Knockout Mouse Embryonic Stem Cells.

Authors:  Ming Shi; Jing Hao; Xi-Wen Wang; Le-Qi Liao; Huiqing Cao; Yangming Wang
Journal:  Int J Mol Sci       Date:  2019-09-05       Impact factor: 5.923

10.  Epigenetic regulation of miR-29a/miR-30c/DNMT3A axis controls SOD2 and mitochondrial oxidative stress in human mesenchymal stem cells.

Authors:  Yi-Deun Jung; Seul-Ki Park; Dayeon Kang; Supyong Hwang; Myoung-Hee Kang; Seung-Woo Hong; Jai-Hee Moon; Jae-Sik Shin; Dong-Hoon Jin; Dalsan You; Joo-Yong Lee; Yun-Yong Park; Jung Jin Hwang; Choung Soo Kim; Nayoung Suh
Journal:  Redox Biol       Date:  2020-09-09       Impact factor: 11.799

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