Literature DB >> 23053536

Bayesian calibration, validation, and uncertainty quantification of diffuse interface models of tumor growth.

Andrea Hawkins-Daarud1, Serge Prudhomme, Kristoffer G van der Zee, J Tinsley Oden.   

Abstract

The idea that one can possibly develop computational models that predict the emergence, growth, or decline of tumors in living tissue is enormously intriguing as such predictions could revolutionize medicine and bring a new paradigm into the treatment and prevention of a class of the deadliest maladies affecting humankind. But at the heart of this subject is the notion of predictability itself, the ambiguity involved in selecting and implementing effective models, and the acquisition of relevant data, all factors that contribute to the difficulty of predicting such complex events as tumor growth with quantifiable uncertainty. In this work, we attempt to lay out a framework, based on Bayesian probability, for systematically addressing the questions of Validation, the process of investigating the accuracy with which a mathematical model is able to reproduce particular physical events, and Uncertainty quantification, developing measures of the degree of confidence with which a computer model predicts particular quantities of interest. For illustrative purposes, we exercise the process using virtual data for models of tumor growth based on diffuse-interface theories of mixtures utilizing virtual data.

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Year:  2012        PMID: 23053536     DOI: 10.1007/s00285-012-0595-9

Source DB:  PubMed          Journal:  J Math Biol        ISSN: 0303-6812            Impact factor:   2.259


  9 in total

1.  Modelling solid tumour growth using the theory of mixtures.

Authors:  Helen Byrne; Luigi Preziosi
Journal:  Math Med Biol       Date:  2003-12       Impact factor: 1.854

2.  Mathematical model for the effects of adhesion and mechanics on cell migration speed.

Authors:  P A DiMilla; K Barbee; D A Lauffenburger
Journal:  Biophys J       Date:  1991-07       Impact factor: 4.033

3.  Contour instabilities in early tumor growth models.

Authors:  M Ben Amar; C Chatelain; P Ciarletta
Journal:  Phys Rev Lett       Date:  2011-04-04       Impact factor: 9.161

Review 4.  Mathematical modelling of avascular-tumour growth.

Authors:  J P Ward; J R King
Journal:  IMA J Math Appl Med Biol       Date:  1997-03

5.  Continuous and discrete mathematical models of tumor-induced angiogenesis.

Authors:  A R Anderson; M A Chaplain
Journal:  Bull Math Biol       Date:  1998-09       Impact factor: 1.758

6.  Three-dimensional multispecies nonlinear tumor growth-II: Tumor invasion and angiogenesis.

Authors:  Hermann B Frieboes; Fang Jin; Yao-Li Chuang; Steven M Wise; John S Lowengrub; Vittorio Cristini
Journal:  J Theor Biol       Date:  2010-03-18       Impact factor: 2.691

7.  Nonlinear simulations of solid tumor growth using a mixture model: invasion and branching.

Authors:  Vittorio Cristini; Xiangrong Li; John S Lowengrub; Steven M Wise
Journal:  J Math Biol       Date:  2008-09-12       Impact factor: 2.259

8.  Modelling the growth of solid tumours and incorporating a method for their classification using nonlinear elasticity theory.

Authors:  M A Chaplain; B D Sleeman
Journal:  J Math Biol       Date:  1993       Impact factor: 2.259

9.  Three-dimensional multispecies nonlinear tumor growth--I Model and numerical method.

Authors:  S M Wise; J S Lowengrub; H B Frieboes; V Cristini
Journal:  J Theor Biol       Date:  2008-03-28       Impact factor: 2.691

  9 in total
  13 in total

1.  Predicting abdominal aortic aneurysm growth using patient-oriented growth models with two-step Bayesian inference.

Authors:  Emrah Akkoyun; Sebastian T Kwon; Aybar C Acar; Whal Lee; Seungik Baek
Journal:  Comput Biol Med       Date:  2020-01-13       Impact factor: 4.589

2.  From short-range repulsion to Hele-Shaw problem in a model of tumor growth.

Authors:  Sebastien Motsch; Diane Peurichard
Journal:  J Math Biol       Date:  2017-06-01       Impact factor: 2.259

3.  Patient-Specific Prediction of Abdominal Aortic Aneurysm Expansion Using Bayesian Calibration.

Authors:  Liangliang Zhang; Zhenxiang Jiang; Jongeun Choi; Chae Young Lim; Tapabrata Maiti; Seungik Baek
Journal:  IEEE J Biomed Health Inform       Date:  2019-01-30       Impact factor: 5.772

4.  Selection, calibration, and validation of models of tumor growth.

Authors:  E A B F Lima; J T Oden; D A Hormuth; T E Yankeelov; R C Almeida
Journal:  Math Models Methods Appl Sci       Date:  2016-10-03       Impact factor: 3.817

5.  Integrated Biophysical Modeling and Image Analysis: Application to Neuro-Oncology.

Authors:  Andreas Mang; Spyridon Bakas; Shashank Subramanian; Christos Davatzikos; George Biros
Journal:  Annu Rev Biomed Eng       Date:  2020-06-04       Impact factor: 9.590

6.  WHERE DID THE TUMOR START? AN INVERSE SOLVER WITH SPARSE LOCALIZATION FOR TUMOR GROWTH MODELS.

Authors:  Shashank Subramanian; Klaudius Scheufele; Miriam Mehl; George Biros
Journal:  Inverse Probl       Date:  2020-02-26       Impact factor: 2.407

Review 7.  Integrating mechanism-based modeling with biomedical imaging to build practical digital twins for clinical oncology.

Authors:  Chengyue Wu; Guillermo Lorenzo; David A Hormuth; Ernesto A B F Lima; Kalina P Slavkova; Julie C DiCarlo; John Virostko; Caleb M Phillips; Debra Patt; Caroline Chung; Thomas E Yankeelov
Journal:  Biophys Rev (Melville)       Date:  2022-05-17

8.  Selection and Validation of Predictive Models of Radiation Effects on Tumor Growth Based on Noninvasive Imaging Data.

Authors:  E A B F Lima; J T Oden; B Wohlmuth; A Shahmoradi; D A Hormuth; T E Yankeelov; L Scarabosio; T Horger
Journal:  Comput Methods Appl Mech Eng       Date:  2017-08-18       Impact factor: 6.756

9.  A Mathematical Model Coupling Tumor Growth and Angiogenesis.

Authors:  Jiangping Xu; Guillermo Vilanova; Hector Gomez
Journal:  PLoS One       Date:  2016-02-18       Impact factor: 3.240

10.  Simulation of 3D centimeter-scale continuum tumor growth at sub-millimeter resolution via distributed computing.

Authors:  Dylan A Goodin; Hermann B Frieboes
Journal:  Comput Biol Med       Date:  2021-05-21       Impact factor: 6.698

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