Literature DB >> 23004787

Curvature sorting of proteins on a cylindrical lipid membrane tether connected to a reservoir.

Pankaj Singh1, Paritosh Mahata, Tobias Baumgart, Sovan Lal Das.   

Abstract

Membrane curvature of a biological cell is actively involved in various fundamental cell biological functions. It has been discovered that membrane curvature and binding of peripheral membrane proteins follow a symbiotic relationship. The exact mechanism behind this interplay of protein binding and membrane curvature has not yet been properly understood. To improve understanding of the mechanism, we study curvature sorting of proteins in a model system consisting of a tether pulled from a giant unilamellar vesicle using mechanical-thermodynamic models. The concentration of proteins bound to the membrane changes significantly due to curvature. This has also been observed in experiments by other researchers. We also find that there is a phase transition based on protein concentration and we discuss the coexistence of phases and stability of solutions. Furthermore, when sorting is favorable, the increase in protein concentration stabilizes the tether in the sense that less pulling force is required to maintain the tether. A similar mechanism may be in place, when motor proteins pull tethers from donor membranes.

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Year:  2012        PMID: 23004787      PMCID: PMC3679408          DOI: 10.1103/PhysRevE.85.051906

Source DB:  PubMed          Journal:  Phys Rev E Stat Nonlin Soft Matter Phys        ISSN: 1539-3755


  38 in total

1.  Nonlinear sorting, curvature generation, and crowding of endophilin N-BAR on tubular membranes.

Authors:  Chen Zhu; Sovan L Das; Tobias Baumgart
Journal:  Biophys J       Date:  2012-04-18       Impact factor: 4.033

Review 2.  How proteins produce cellular membrane curvature.

Authors:  Joshua Zimmerberg; Michael M Kozlov
Journal:  Nat Rev Mol Cell Biol       Date:  2006-01       Impact factor: 94.444

Review 3.  Membrane curvature and mechanisms of dynamic cell membrane remodelling.

Authors:  Harvey T McMahon; Jennifer L Gallop
Journal:  Nature       Date:  2005-12-01       Impact factor: 49.962

4.  Dynamic sorting of lipids and proteins in membrane tubes with a moving phase boundary.

Authors:  Michael Heinrich; Aiwei Tian; Cinzia Esposito; Tobias Baumgart
Journal:  Proc Natl Acad Sci U S A       Date:  2010-04-05       Impact factor: 11.205

5.  Binding of peripheral proteins to mixed lipid membranes: effect of lipid demixing upon binding.

Authors:  T Heimburg; B Angerstein; D Marsh
Journal:  Biophys J       Date:  1999-05       Impact factor: 4.033

Review 6.  Thermodynamics and mechanics of membrane curvature generation and sensing by proteins and lipids.

Authors:  Tobias Baumgart; Benjamin R Capraro; Chen Zhu; Sovan L Das
Journal:  Annu Rev Phys Chem       Date:  2011       Impact factor: 12.703

7.  Role of the ENTH domain in phosphatidylinositol-4,5-bisphosphate binding and endocytosis.

Authors:  T Itoh; S Koshiba; T Kigawa; A Kikuchi; S Yokoyama; T Takenawa
Journal:  Science       Date:  2001-02-09       Impact factor: 47.728

Review 8.  Mechanisms shaping the membranes of cellular organelles.

Authors:  Yoko Shibata; Junjie Hu; Michael M Kozlov; Tom A Rapoport
Journal:  Annu Rev Cell Dev Biol       Date:  2009       Impact factor: 13.827

9.  Sorting of lipids and proteins in membrane curvature gradients.

Authors:  A Tian; T Baumgart
Journal:  Biophys J       Date:  2009-04-08       Impact factor: 4.033

10.  Generation of high curvature membranes mediated by direct endophilin bilayer interactions.

Authors:  K Farsad; N Ringstad; K Takei; S R Floyd; K Rose; P De Camilli
Journal:  J Cell Biol       Date:  2001-10-15       Impact factor: 10.539

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  15 in total

1.  Application of a free-energy-landscape approach to study tension-dependent bilayer tubulation mediated by curvature-inducing proteins.

Authors:  Richard W Tourdot; N Ramakrishnan; Tobias Baumgart; Ravi Radhakrishnan
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2015-10-29

2.  Bending "on the rocks"--a cocktail of biophysical modules to build endocytic pathways.

Authors:  Ludger Johannes; Christian Wunder; Patricia Bassereau
Journal:  Cold Spring Harb Perspect Biol       Date:  2014-01-01       Impact factor: 10.005

3.  Mesoscale computational studies of membrane bilayer remodeling by curvature-inducing proteins.

Authors:  N Ramakrishnan; P B Sunil Kumar; Ravi Radhakrishnan
Journal:  Phys Rep       Date:  2014-10-01       Impact factor: 25.600

Review 4.  When Physics Takes Over: BAR Proteins and Membrane Curvature.

Authors:  Mijo Simunovic; Gregory A Voth; Andrew Callan-Jones; Patricia Bassereau
Journal:  Trends Cell Biol       Date:  2015-10-28       Impact factor: 20.808

5.  Hydrodynamics govern the pre-fusion docking time of synaptic vesicles.

Authors:  Pankaj Singh; Chung-Yuen Hui
Journal:  J R Soc Interface       Date:  2018-01       Impact factor: 4.118

6.  Membrane shape modulates transmembrane protein distribution.

Authors:  Sophie Aimon; Andrew Callan-Jones; Alice Berthaud; Mathieu Pinot; Gilman E S Toombes; Patricia Bassereau
Journal:  Dev Cell       Date:  2014-01-27       Impact factor: 12.270

7.  Protein-induced membrane curvature alters local membrane tension.

Authors:  Padmini Rangamani; Kranthi K Mandadap; George Oster
Journal:  Biophys J       Date:  2014-08-05       Impact factor: 4.033

8.  Excess area dependent scaling behavior of nano-sized membrane tethers.

Authors:  N Ramakrishnan; K K Sreeja; Arpita Roychoudhury; David M Eckmann; Portonovo S Ayyaswamy; Tobias Baumgart; Thomas Pucadyil; Shivprasad Patil; Valerie M Weaver; Ravi Radhakrishnan
Journal:  Phys Biol       Date:  2018-01-11       Impact factor: 2.583

9.  Defining the free-energy landscape of curvature-inducing proteins on membrane bilayers.

Authors:  Richard W Tourdot; N Ramakrishnan; Ravi Radhakrishnan
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2014-08-25

Review 10.  Physical basis of some membrane shaping mechanisms.

Authors:  Mijo Simunovic; Coline Prévost; Andrew Callan-Jones; Patricia Bassereau
Journal:  Philos Trans A Math Phys Eng Sci       Date:  2016-07-28       Impact factor: 4.226

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